FFCP PHASE1:Hg19::chr9:32405051..32405072,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr9:32405051..32405072,+ | |||
|description=CAGE_peak_at_chr9:32405051..32405072,+ | |description=CAGE_peak_at_chr9:32405051..32405072,+ | ||
|id=chr9:32405051..32405072,+ | |id=chr9:32405051..32405072,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000182;7.66e-10;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,7.10e-10,12 | |||
|ontology_enrichment_development_v019=UBERON:0006242;1.10e-13;1!UBERON:0001045;1.83e-13;1!UBERON:0006595;6.80e-07;86 | |||
|ontology_enrichment_disease=DOID:4929!1.80e-08!2;DOID:3493!2.51e-08!2 | |||
|ontology_enrichment_disease_v019=DOID:4929;1.40e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4929,1.45e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0001007!2.72e-13!155;UBERON:0001555!2.72e-13!155;UBERON:0007026!2.72e-13!155;UBERON:0007023!1.55e-12!115;UBERON:0004921!4.95e-12!129;UBERON:0004185!4.95e-12!129;UBERON:0004119!1.27e-11!169;UBERON:0000925!1.27e-11!169;UBERON:0006595!1.27e-11!169;UBERON:0005409!8.24e-09!35;UBERON:0000077!1.12e-07!130;UBERON:0000160!1.24e-07!27;UBERON:0009854!1.69e-07!23;UBERON:0001041!4.37e-07!98;UBERON:0009497!7.74e-07!25;UBERON:0000015!7.74e-07!25;UBERON:0002423!7.74e-07!25;UBERON:0006235!7.74e-07!25;UBERON:0004161!7.74e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0000160;1.31e-24;17!UBERON:0002108;5.88e-23;4!UBERON:0005409;3.27e-19;22!UBERON:0002423;1.86e-17;25!UBERON:0002114;2.20e-17;2!UBERON:0004913;7.09e-14;1!UBERON:0003703;7.09e-14;1!UBERON:0001174;7.09e-14;1!UBERON:0004914;7.09e-14;1!UBERON:0001154;1.83e-13;1!UBERON:0001153;1.83e-13;1!UBERON:0009854;1.83e-13;1!UBERON:0001155;3.66e-13;9!UBERON:0001007;4.48e-12;81!UBERON:0004921;9.39e-12;33!UBERON:0000059;7.10e-11;11!UBERON:0002107;1.19e-10;19!UBERON:0006925;1.19e-10;19!UBERON:0002294;4.83e-08;7!UBERON:0001173;4.83e-08;7!UBERON:0002365;8.07e-07;31!UBERON:0002330;8.07e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.40e-24,17;UBERON:0002108,6.83e-23,4;UBERON:0009854,5.92e-19,23;UBERON:0009497,1.70e-17,25;UBERON:0000015,1.70e-17,25;UBERON:0002423,1.70e-17,25;UBERON:0006235,1.70e-17,25;UBERON:0004161,1.70e-17,25;UBERON:0002114,2.50e-17,2;UBERON:0005409,6.02e-17,25;UBERON:0009856,9.71e-17,26;UBERON:0008835,5.07e-14,22;UBERON:0003894,5.07e-14,22;UBERON:0004913,7.55e-14,1;UBERON:0003703,7.55e-14,1;UBERON:0001174,7.55e-14,1;UBERON:0004914,7.55e-14,1;UBERON:0001154,1.83e-13,1;UBERON:0001153,1.83e-13,1;UBERON:0001045,1.83e-13,1;UBERON:0001155,3.59e-13,9;UBERON:0001007,8.41e-13,145;UBERON:0001555,8.41e-13,145;UBERON:0007026,8.41e-13,145;UBERON:0007499,2.45e-12,25;UBERON:0004119,1.87e-11,160;UBERON:0000925,1.87e-11,160;UBERON:0006595,1.87e-11,160;UBERON:0004921,2.86e-11,118;UBERON:0000059,6.98e-11,11;UBERON:0002107,1.15e-10,19;UBERON:0006925,1.15e-10,19;UBERON:0008836,1.15e-10,19;UBERON:0003929,6.29e-08,54;UBERON:0005911,7.95e-07,82 | |||
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| ||
|short_description=p@chr9:32405051..32405072,+ | |short_description=p@chr9:32405051..32405072,+ | ||
}} | }} |
Latest revision as of 01:21, 1 August 2015
Short description: | p@chr9:32405051..32405072, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:32405051..32405072, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 7.10e-10 | 12 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.40e-24 | 17 |
small intestine | 6.83e-23 | 4 |
digestive tract diverticulum | 5.92e-19 | 23 |
epithelium of foregut-midgut junction | 1.70e-17 | 25 |
anatomical boundary | 1.70e-17 | 25 |
hepatobiliary system | 1.70e-17 | 25 |
foregut-midgut junction | 1.70e-17 | 25 |
septum transversum | 1.70e-17 | 25 |
duodenum | 2.50e-17 | 2 |
gastrointestinal system | 6.02e-17 | 25 |
sac | 9.71e-17 | 26 |
hepatic diverticulum | 5.07e-14 | 22 |
liver primordium | 5.07e-14 | 22 |
hepatopancreatic ampulla | 7.55e-14 | 1 |
extrahepatic bile duct | 7.55e-14 | 1 |
common bile duct | 7.55e-14 | 1 |
duodenal papilla | 7.55e-14 | 1 |
vermiform appendix | 1.83e-13 | 1 |
caecum | 1.83e-13 | 1 |
midgut | 1.83e-13 | 1 |
colon | 3.59e-13 | 9 |
digestive system | 8.41e-13 | 145 |
digestive tract | 8.41e-13 | 145 |
primitive gut | 8.41e-13 | 145 |
epithelial sac | 2.45e-12 | 25 |
endoderm-derived structure | 1.87e-11 | 160 |
endoderm | 1.87e-11 | 160 |
presumptive endoderm | 1.87e-11 | 160 |
subdivision of digestive tract | 2.86e-11 | 118 |
large intestine | 6.98e-11 | 11 |
liver | 1.15e-10 | 19 |
digestive gland | 1.15e-10 | 19 |
liver bud | 1.15e-10 | 19 |
gut epithelium | 6.29e-08 | 54 |
endo-epithelium | 7.95e-07 | 82 |
Ontology term | p-value | n |
---|---|---|
tubular adenocarcinoma | 1.45e-07 | 2 |