FFCP PHASE1:Hg19::chr9:37784893..37784904,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51010 | |EntrezGene=51010 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17944 | |HGNC=17944 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-151bp_to_ENST00000465860,ENST00000496910_5end | |association_with_transcript=-151bp_to_ENST00000465860,ENST00000496910_5end | ||
|cluster_id=chr9:37784893..37784904,- | |||
|description=CAGE_peak_4_at_EXOSC3_5end | |description=CAGE_peak_4_at_EXOSC3_5end | ||
|id=chr9:37784893..37784904,- | |id=chr9:37784893..37784904,- | ||
|ontology_enrichment_celltype=CL:0000037!7.23e-15!172;CL:0000566!7.23e-15!172;CL:0002032!1.75e-13!165;CL:0000837!1.75e-13!165;CL:0000988!5.76e-13!182;CL:0000763!7.66e-08!112;CL:0000049!7.66e-08!112 | |ontology_enrichment_celltype=CL:0000037!7.23e-15!172;CL:0000566!7.23e-15!172;CL:0002032!1.75e-13!165;CL:0000837!1.75e-13!165;CL:0000988!5.76e-13!182;CL:0000763!7.66e-08!112;CL:0000049!7.66e-08!112 | ||
|ontology_enrichment_celltype_v019=CL:0000037;8.25e-08;1!CL:0001024;8.25e-08;1!CL:0002032;2.57e-07;1!CL:0000557;2.57e-07;1!CL:0000306;6.63e-07;4!CL:0002222;6.63e-07;4!CL:0002224;6.63e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,1.17e-17,168;CL:0000988,1.64e-16,177;CL:0002032,3.27e-15,161;CL:0000837,3.27e-15,161;CL:0000763,1.46e-12,108;CL:0000049,1.46e-12,108;CL:0001024,8.00e-08,1;CL:0000306,7.27e-07,4;CL:0002222,7.27e-07,4;CL:0002224,7.27e-07,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2531!4.19e-23!51;DOID:0060083!4.19e-23!51;DOID:1240!3.74e-20!39;DOID:8692!1.96e-17!31;DOID:162!1.44e-13!235;DOID:14566!2.40e-13!239;DOID:0050686!2.84e-10!137 | |||
|ontology_enrichment_disease_v019=DOID:8692;2.23e-30;31!DOID:1240;3.20e-25;39!DOID:2531;1.42e-23;51!DOID:0060083;1.42e-23;51!DOID:9119;2.57e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,2.18e-35,51;DOID:0060083,2.18e-35,51;DOID:1240,1.94e-32,39;DOID:8692,4.85e-31,31;DOID:0050686,1.04e-10,137;DOID:9119,2.66e-07,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0010077;6.63e-07;4!UBERON:0005389;6.63e-07;4!UBERON:0000484;6.63e-07;4!UBERON:0000965;6.63e-07;4!UBERON:0001803;6.63e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010077,7.27e-07,4;UBERON:0005389,7.27e-07,4;UBERON:0000484,7.27e-07,4;UBERON:0002546,7.27e-07,4;UBERON:0000965,7.27e-07,4;UBERON:0001803,7.27e-07,4;UBERON:0003073,7.27e-07,4;UBERON:0005426,7.27e-07,4 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0,0.247532705920093,0,0,0,0,0,0,0.204000691244253,0,0,0.410623275218653,0,0.229240217243854,0.0821005894499457,0.393553906568396,0.393364276848904,0.767658796194425,0.464448369948228,0,0,0,2.78881922089086,0.995184627411951,3.52320527201817,0,0,0.217010870715852,0,0,0.257575567634187,0.436194716338694,0,0.242584061187816,0.464858073811369,1.23350366406548,0,0.28769239232215,0.256160706529101,0.236482229888585,1.03423704220986,0.645484683583826,0,0,0,0,0.306083892370903,0,0,0,0.398927315243264,0,0,0,0,0.251248665256743,0,0,0,0,0.632924774881769,0,0,0,0,0,0,0,0.19891667719909,0,0,0,0,1.70692089026603,0,0,0,0,0,0,0,1.32171328579026,0,2.10707267820062,0.590129310341499,0,0.616804496998528,0.668745981562712,0.32592226663359,0.473447805734733,0,0.557052284425868,0,0.443067789167242,0.270803863765016,0.512365278902701,0.260118695119756,0.328875809207352,0.829050053357545,0.289803085735052,0.444859689486181,0,0,0.793165398882963,0,0,0.506039384039006,0,0.651083453856419,0,0.150575119077773,0.127986611154418,0,0,1.64225599384209,0.403213486449465,0.534880391567015,0.579297615531196,0,0.670700859703636,0,0.361439152384566,0,0,0,0,0.0945348171640679,0,0.087834785693126,0.261958150995425,0,0,0,0,0.132957960518865,0.715471872916026,0,0,0.198762407366705,0,0,0,0,0.825354125820202,0,0.516833518338658,0,0.33472061276467,0,0,0,0,0,0.17859945656816,0.22452937262617,0.112611480483322,0,0,0.366403487860815,0,0,0,0,0,0,0,0,0.560677600142307,0,0.49333509683432,0,0.269421344139376,0,0,0,0,0,0,0.149448680551801,0,0,0,0.408308342509787,0.122834317311768,0,0,0,0,0,0,0,0,0.438977620880838,0,0,0.226864366320042,0,0,0,0.300091096084402,0,0,0.18611685633159,0,0,0,0,0,0.355009592516614,0.201504196455281,0.339121184620975,0.386521706326594,0,0,0.487894824518382,0,0.232387885739037,0.10366105501537,0,0,0,0,0,0,0,0.236613600079688,0.674338760312407,0,0.110293972732394,0.435758888184812,0.237270619111097,0.134831308160164,0,0.38474715694639,0,0,0,0,0,0,0,2.6487785964879,0.245976877086227,0,0.109750285408626,0,0.100528972411631,0.0925884451585296,0.325808305310325,0,1.44331342025273,0.115930404975077,0,0,0,0,0.790204397959275,0.858486162094873,0.246217006087397,0.234004265139238,0.297262324577456,0.93733833986777,0,0.141775097242386,0,0,0,0.985326475791887,0.616339038092582,0.414656231081544,0,0,0.126995788584338,0,0,0,0.102827492703324,0.600686115687835,0,0,0,0,0.129271715757778,0,0.845302752556,0,0,0,0,0,0,0,0,0,0,0.791951872933429,0,0,0,0,0,0,0,0,0,0,0,0,0.224170287987055,0.591092280605782,0.431255149719035,0.385029108839245,0.508189248444927,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0,0,0,0,0,0.664225598535437,0,0,0,0,0.413536052245775,0.215714200818617,0.853820462427555,0,0,0,0,0,0,0.384417447767103,0,0.160853921143607,0,0.154209693802656,0,0.164254312027618,0,0.116210378459959,0.362578348774867,0.200506470303285,0,0.114814448164607,0,0.131124414959424,0,0,0,0,0,0,0.170093705276516,0.431831832204279,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0.27470839445503,0,0.574265537996172,0,0,0.096670718292122,0,0,0,0,0.145016693914229,0.170453254832202,0,0.330569830721956,0,0.382838137483752,0.2023155617111,0.464845549297286,0,0,0.308033580176089,0.532306030317022,0,0,0,0.372158369359667,0,0,0,0,0,0,0.359744915166629,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0.371606350251437,0.865615277858669,0.569134746787313,1.11598390910176,1.1974762285969,4.0216127727797,3.38677732358213,0.649243880549111,1.40398589056729,1.36940807419915,1.72347885350326,2.50634477090067,1.69291777801603,2.24823305145179,0.80719882876419,0.425846237690326,0.343505344755765,0.307240764308458,1.56573275524691,0.834245708559542,0.586164286206121,0.278406173895242,0,0,1.33228787199128,2.81974010175699,0.18714054040822,0,0.121360521749513,0.334330152832435,0,0,0.296964680832639,0,0,0,0.111308705022906,1.31843099381408,0,0.19924798825107,0,0,0,0.984678443688556,0,0.0898683511473268,0,1.53471711068062,0.197286811273867,0,0,0,0,0,0.260427761085233,0.874599999961957,0,0,0.254253650292766,0.472775363535873,0,0.291604613383254,0,0,0.361789315876224,0,0.331737779793674,0.295547618953547,0,0.10893846351899,0.41827123283581,0.0769502585037971,0,0,0,0.108647371922008,0,0,0,10.2193298195736,0.784901281975124,0.831058409500782,0.676786981851542,0.19606253431774,0.335643173951685,0.37950746544837,0.635746315921515,0,0,0.282706142867882,0,0,0.353830258013357,0,0,0,0.104421949505455,0,0,0,0.91227394607833,0,0,0,0,0,0.189559738885464,0.901940516486955,0,0,0,0.313932918407225,0,0,0,0.173559738335131,0.293977192243133,0.609414446062818,0.17472666824203,0.171986032471617,0.387025325156341,0.219267951258557,0.164230914106418,0.193978032976839,0,0.451961481561065,0.548167698587004,0.19871461170299,0.126621591911757,0,0,0,0.39961921916426,0,0,0,0,0.124252535565433,0.235694034616795,0.135904206073614,0,0,0,0.600420288709789,0.27381075778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| ||
|short_description=p4@EXOSC3 | |short_description=p4@EXOSC3 | ||
}} | }} |
Latest revision as of 11:19, 17 September 2015
Short description: | p4@EXOSC3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_EXOSC3_5end |
Coexpression cluster: | NA |
Association with transcript: | -151bp_to_ENST00000465860, ENST00000496910_5end |
EntrezGene: | EXOSC3 |
HGNC: | 17944 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 1.17e-17 | 168 |
hematopoietic cell | 1.64e-16 | 177 |
hematopoietic oligopotent progenitor cell | 3.27e-15 | 161 |
hematopoietic multipotent progenitor cell | 3.27e-15 | 161 |
myeloid cell | 1.46e-12 | 108 |
common myeloid progenitor | 1.46e-12 | 108 |
CD34-positive, CD38-negative hematopoietic stem cell | 8.00e-08 | 1 |
crystallin accumulating cell | 7.27e-07 | 4 |
vertebrate lens cell | 7.27e-07 | 4 |
lens epithelial cell | 7.27e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
cuboidal epithelium | 7.27e-07 | 4 |
transparent eye structure | 7.27e-07 | 4 |
simple cuboidal epithelium | 7.27e-07 | 4 |
cranial placode | 7.27e-07 | 4 |
lens of camera-type eye | 7.27e-07 | 4 |
epithelium of lens | 7.27e-07 | 4 |
lens placode | 7.27e-07 | 4 |
lens vesicle | 7.27e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 2.18e-35 | 51 |
immune system cancer | 2.18e-35 | 51 |
leukemia | 1.94e-32 | 39 |
myeloid leukemia | 4.85e-31 | 31 |
organ system cancer | 1.04e-10 | 137 |
acute myeloid leukemia | 2.66e-07 | 1 |