FFCP PHASE1:Hg19::chr2:85938730..85938740,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:85938730..85938740,+ | |||
|coexpression_cluster_id=C95 | |||
|description=CAGE_peak_at_chr2:85938730..85938740,+ | |description=CAGE_peak_at_chr2:85938730..85938740,+ | ||
|id=chr2:85938730..85938740,+ | |id=chr2:85938730..85938740,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0007123;2.22e-27;5!UBERON:0008947;5.14e-11;29!UBERON:0001041;1.13e-10;30 | |||
|ontology_enrichment_disease=DOID:114!1.54e-07!2 | |ontology_enrichment_disease=DOID:114!1.54e-07!2 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002171!3.08e-14!1;UBERON:0006518!3.08e-14!1;UBERON:0008949!3.08e-14!1;UBERON:0000101!3.08e-14!1;UBERON:0002167!3.08e-14!1;UBERON:0002046!3.54e-11!5;UBERON:0004117!3.54e-11!5;UBERON:0007689!3.54e-11!5;UBERON:0007123!3.54e-11!5;UBERON:0003091!3.54e-11!5;UBERON:0007023!1.44e-09!115;UBERON:0000007!1.45e-07!2;UBERON:0002148!1.75e-07!2;UBERON:0009662!1.75e-07!2;UBERON:0002298!4.99e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0002171;1.84e-34;1!UBERON:0006518;1.84e-34;1!UBERON:0008949;1.84e-34;1!UBERON:0000101;1.84e-34;1!UBERON:0002167;1.84e-34;1!UBERON:0002046;2.22e-27;5!UBERON:0002048;2.85e-14;22!UBERON:0000117;2.85e-14;22!UBERON:0000171;2.85e-14;22!UBERON:0000170;2.85e-14;22!UBERON:0005178;1.50e-08;34!UBERON:0002224;1.50e-08;34!UBERON:0000065;5.83e-07;44!UBERON:0005181;7.47e-07;35 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002171,1.84e-34,1;UBERON:0006518,1.84e-34,1;UBERON:0008949,1.84e-34,1;UBERON:0000101,1.84e-34,1;UBERON:0002167,1.84e-34,1;UBERON:0002046,2.38e-27,5;UBERON:0004117,2.38e-27,5;UBERON:0007689,2.38e-27,5;UBERON:0007123,2.38e-27,5;UBERON:0003091,2.38e-27,5;UBERON:0002048,2.73e-14,22;UBERON:0000117,2.73e-14,22;UBERON:0000171,2.73e-14,22;UBERON:0000170,2.73e-14,22;UBERON:0005597,2.73e-14,22;UBERON:0000118,2.73e-14,22;UBERON:0009722,4.80e-13,11;UBERON:0007690,4.80e-13,11;UBERON:0005911,1.51e-10,82;UBERON:0005178,1.62e-09,34;UBERON:0002224,1.62e-09,34;UBERON:0005181,2.89e-09,35;UBERON:0005153,8.39e-09,37;UBERON:0008947,1.37e-08,38;UBERON:0003258,1.37e-08,38;UBERON:0008814,2.33e-08,18;UBERON:0005157,4.50e-07,47 | |||
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|short_description=p@chr2:85938730..85938740,+ | |short_description=p@chr2:85938730..85938740,+ | ||
}} | }} |
Latest revision as of 12:47, 29 July 2015
Short description: | p@chr2:85938730..85938740, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:85938730..85938740, + |
Coexpression cluster: | C95_lung_aorta_trachea_penis_Alveolar_throat_endometrioid |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lower lobe of right lung | 1.84e-34 | 1 |
right lung lobe | 1.84e-34 | 1 |
lower lobe of lung | 1.84e-34 | 1 |
lobe of lung | 1.84e-34 | 1 |
right lung | 1.84e-34 | 1 |
thyroid gland | 2.38e-27 | 5 |
pharyngeal pouch | 2.38e-27 | 5 |
thyroid diverticulum | 2.38e-27 | 5 |
pharyngeal pouch 2 | 2.38e-27 | 5 |
thyroid primordium | 2.38e-27 | 5 |
lung | 2.73e-14 | 22 |
respiratory tube | 2.73e-14 | 22 |
respiration organ | 2.73e-14 | 22 |
pair of lungs | 2.73e-14 | 22 |
lung primordium | 2.73e-14 | 22 |
lung bud | 2.73e-14 | 22 |
entire pharyngeal arch endoderm | 4.80e-13 | 11 |
early pharyngeal endoderm | 4.80e-13 | 11 |
endo-epithelium | 1.51e-10 | 82 |
thoracic cavity element | 1.62e-09 | 34 |
thoracic cavity | 1.62e-09 | 34 |
thoracic segment organ | 2.89e-09 | 35 |
epithelial bud | 8.39e-09 | 37 |
respiratory primordium | 1.37e-08 | 38 |
endoderm of foregut | 1.37e-08 | 38 |
pharyngeal arch system | 2.33e-08 | 18 |
epithelial fold | 4.50e-07 | 47 |