FFCP PHASE1:Hg19::chr2:88991220..88991257,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=22934 | |EntrezGene=22934 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10297 | |HGNC=10297 | ||
|TSSclassifier=strong | |||
|UniProt=P49247 | |UniProt=P49247 | ||
|association_with_transcript=16bp_to_BC015529_5end | |association_with_transcript=16bp_to_BC015529_5end | ||
|cluster_id=chr2:88991220..88991257,+ | |||
|coexpression_cluster_id=C14 | |||
|description=CAGE_peak_3_at_RPIA_5end | |description=CAGE_peak_3_at_RPIA_5end | ||
|id=chr2:88991220..88991257,+ | |id=chr2:88991220..88991257,+ | ||
|ontology_enrichment_celltype=CL:0000542!1.63e-23!53;CL:0000051!1.63e-23!53;CL:0000838!2.66e-23!52;CL:0000037!2.92e-20!172;CL:0000566!2.92e-20!172;CL:0000988!5.54e-19!182;CL:0002032!7.16e-19!165;CL:0000837!7.16e-19!165;CL:0002087!1.35e-15!119;CL:0002031!2.24e-14!124;CL:0000084!1.05e-12!25;CL:0000827!1.05e-12!25;CL:0000738!4.84e-12!140;CL:0000945!4.58e-10!24;CL:0000826!4.58e-10!24;CL:0000791!8.12e-10!18;CL:0000789!8.12e-10!18;CL:0002420!8.12e-10!18;CL:0002419!8.12e-10!18;CL:0000790!8.12e-10!18 | |ontology_enrichment_celltype=CL:0000542!1.63e-23!53;CL:0000051!1.63e-23!53;CL:0000838!2.66e-23!52;CL:0000037!2.92e-20!172;CL:0000566!2.92e-20!172;CL:0000988!5.54e-19!182;CL:0002032!7.16e-19!165;CL:0000837!7.16e-19!165;CL:0002087!1.35e-15!119;CL:0002031!2.24e-14!124;CL:0000084!1.05e-12!25;CL:0000827!1.05e-12!25;CL:0000738!4.84e-12!140;CL:0000945!4.58e-10!24;CL:0000826!4.58e-10!24;CL:0000791!8.12e-10!18;CL:0000789!8.12e-10!18;CL:0002420!8.12e-10!18;CL:0002419!8.12e-10!18;CL:0000790!8.12e-10!18 | ||
|ontology_enrichment_celltype_v019=CL:0000542;3.46e-15;53!CL:0000084;8.71e-14;25!CL:0000945;1.06e-10;24!CL:0000791;1.41e-10;18!CL:0000789;1.41e-10;18!CL:0002419;1.41e-10;18!CL:0000625;8.78e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,4.16e-25,53;CL:0000051,4.16e-25,53;CL:0000838,7.09e-25,52;CL:0000037,7.39e-23,168;CL:0002032,2.99e-21,161;CL:0000837,2.99e-21,161;CL:0000988,4.88e-21,177;CL:0002087,8.72e-17,115;CL:0002031,8.26e-16,120;CL:0000738,7.13e-14,136;CL:0000084,1.23e-13,25;CL:0000827,1.23e-13,25;CL:0000945,1.50e-10,24;CL:0000826,1.50e-10,24;CL:0000791,1.65e-10,18;CL:0000789,1.65e-10,18;CL:0002420,1.65e-10,18;CL:0002419,1.65e-10,18;CL:0000790,1.65e-10,18;CL:0000625,9.92e-07,11 | |||
|ontology_enrichment_development_v019=CL:0000051;3.46e-15;53!CL:0000790;1.41e-10;18 | |||
|ontology_enrichment_disease=DOID:2531!1.91e-14!51;DOID:0060083!1.91e-14!51;DOID:1240!5.69e-12!39;DOID:8692!5.87e-09!31;DOID:162!9.22e-09!235;DOID:14566!1.35e-08!239;DOID:0050686!9.54e-08!137 | |ontology_enrichment_disease=DOID:2531!1.91e-14!51;DOID:0060083!1.91e-14!51;DOID:1240!5.69e-12!39;DOID:8692!5.87e-09!31;DOID:162!9.22e-09!235;DOID:14566!1.35e-08!239;DOID:0050686!9.54e-08!137 | ||
|ontology_enrichment_disease_v019=DOID:1240;2.92e-10;39!DOID:2531;3.99e-10;51!DOID:0060083;3.99e-10;51!DOID:8692;3.62e-09;31 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,1.34e-15,51;DOID:0060083,1.34e-15,51;DOID:1240,1.32e-12,39;DOID:8692,2.35e-09,31;DOID:162,1.18e-07,235;DOID:14566,1.27e-07,239;DOID:0050686,1.49e-07,137 | |||
|ontology_enrichment_uberon=UBERON:0000178!2.01e-08!15;UBERON:0000179!2.01e-08!15;UBERON:0000463!2.01e-08!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;6.73e-09;15!UBERON:0000179;6.73e-09;15!UBERON:0000463;6.73e-09;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,5.34e-09,15;UBERON:0000179,5.34e-09,15;UBERON:0000463,5.34e-09,15 | |||
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| ||
|short_description=p3@RPIA | |short_description=p3@RPIA | ||
}} | }} |
Latest revision as of 20:59, 18 September 2015
Short description: | p3@RPIA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_RPIA_5end |
Coexpression cluster: | C14_Whole_blood_Reticulocytes_liver_Neutrophils_Eosinophils_spleen |
Association with transcript: | 16bp_to_BC015529_5end |
EntrezGene: | RPIA |
HGNC: | 10297 |
UniProt: | P49247 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 4.16e-25 | 53 |
common lymphoid progenitor | 4.16e-25 | 53 |
lymphoid lineage restricted progenitor cell | 7.09e-25 | 52 |
hematopoietic stem cell | 7.39e-23 | 168 |
hematopoietic oligopotent progenitor cell | 2.99e-21 | 161 |
hematopoietic multipotent progenitor cell | 2.99e-21 | 161 |
hematopoietic cell | 4.88e-21 | 177 |
nongranular leukocyte | 8.72e-17 | 115 |
hematopoietic lineage restricted progenitor cell | 8.26e-16 | 120 |
leukocyte | 7.13e-14 | 136 |
T cell | 1.23e-13 | 25 |
pro-T cell | 1.23e-13 | 25 |
lymphocyte of B lineage | 1.50e-10 | 24 |
pro-B cell | 1.50e-10 | 24 |
mature alpha-beta T cell | 1.65e-10 | 18 |
alpha-beta T cell | 1.65e-10 | 18 |
immature T cell | 1.65e-10 | 18 |
mature T cell | 1.65e-10 | 18 |
immature alpha-beta T cell | 1.65e-10 | 18 |
CD8-positive, alpha-beta T cell | 9.92e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
blood | 5.34e-09 | 15 |
haemolymphatic fluid | 5.34e-09 | 15 |
organism substance | 5.34e-09 | 15 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 1.34e-15 | 51 |
immune system cancer | 1.34e-15 | 51 |
leukemia | 1.32e-12 | 39 |
myeloid leukemia | 2.35e-09 | 31 |
cancer | 1.18e-07 | 235 |
disease of cellular proliferation | 1.27e-07 | 239 |
organ system cancer | 1.49e-07 | 137 |