FFCP PHASE1:Hg19::chr3:100211412..100211501,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55076 | |EntrezGene=55076 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25480 | |HGNC=25480 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NWC5 | |UniProt=Q9NWC5 | ||
|association_with_transcript=0bp_to_ENST00000323523,ENST00000403410,NM_018004,uc003dtz.1_5end | |association_with_transcript=0bp_to_ENST00000323523,ENST00000403410,NM_018004,uc003dtz.1_5end | ||
|cluster_id=chr3:100211412..100211501,+ | |||
|coexpression_cluster_id=C4255 | |||
|description=CAGE_peak_1_at_TMEM45A_5end | |description=CAGE_peak_1_at_TMEM45A_5end | ||
|id=chr3:100211412..100211501,+ | |id=chr3:100211412..100211501,+ | ||
|ontology_enrichment_celltype=CL:0000055!1.90e-23!180;CL:0000057!3.16e-14!75;CL:0000680!7.31e-12!57;CL:0000056!7.31e-12!57;CL:0000355!7.31e-12!57;CL:0000187!3.66e-11!54;CL:0000183!7.81e-11!59;CL:0000393!1.01e-09!60;CL:0000211!1.01e-09!60;CL:0000192!1.18e-09!42;CL:0000514!1.18e-09!42;CL:0000359!2.86e-08!32 | |ontology_enrichment_celltype=CL:0000055!1.90e-23!180;CL:0000057!3.16e-14!75;CL:0000680!7.31e-12!57;CL:0000056!7.31e-12!57;CL:0000355!7.31e-12!57;CL:0000187!3.66e-11!54;CL:0000183!7.81e-11!59;CL:0000393!1.01e-09!60;CL:0000211!1.01e-09!60;CL:0000192!1.18e-09!42;CL:0000514!1.18e-09!42;CL:0000359!2.86e-08!32 | ||
|ontology_enrichment_celltype_v019=CL:0000349;7.57e-11;19!CL:0000134;3.53e-10;55!CL:0000048;1.03e-08;58!CL:0000723;1.48e-08;61!CL:0000359;7.94e-08;32!CL:0000192;2.02e-07;43!CL:0000034;6.75e-07;69!CL:0000187;6.97e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,6.28e-15,76;CL:0000680,3.32e-12,58;CL:0000056,3.32e-12,58;CL:0000355,3.32e-12,58;CL:0000187,1.70e-11,55;CL:0000349,8.31e-11,19;CL:0000393,3.95e-10,61;CL:0000211,3.95e-10,61;CL:0000192,5.68e-10,43;CL:0000514,5.68e-10,43;CL:0000359,2.48e-08,32 | |||
|ontology_enrichment_development_v019=CL:0000514;2.02e-07;43!CL:0000355;7.94e-07;58 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!7.48e-15!83;UBERON:0002329!7.48e-15!83;UBERON:0003077!7.48e-15!83;UBERON:0003059!7.48e-15!83;UBERON:0007282!7.48e-15!83;UBERON:0009618!7.48e-15!83;UBERON:0007285!7.48e-15!83;UBERON:0005256!7.96e-15!143;UBERON:0000475!1.43e-13!365;UBERON:0002100!1.54e-13!216;UBERON:0000486!2.32e-13!82;UBERON:0004290!1.22e-12!70;UBERON:0000468!2.42e-12!659;UBERON:0003104!9.58e-12!238;UBERON:0009142!9.58e-12!238;UBERON:0001134!1.87e-11!61;UBERON:0002036!1.87e-11!61;UBERON:0003082!1.87e-11!61;UBERON:0000481!6.26e-11!347;UBERON:0002385!7.19e-11!63;UBERON:0001015!7.19e-11!63;UBERON:0000383!7.19e-11!63;UBERON:0003102!5.13e-09!95;UBERON:0000478!5.19e-09!24;UBERON:0005631!9.29e-09!14;UBERON:0000158!9.29e-09!14;UBERON:0000490!1.07e-08!138;UBERON:0004923!1.55e-08!57;UBERON:0000480!5.10e-08!626;UBERON:0000467!7.39e-08!625;UBERON:0004872!8.26e-08!84;UBERON:0002199!3.01e-07!45;UBERON:0002416!3.01e-07!45;UBERON:0000477!3.36e-07!286;UBERON:0000119!5.11e-07!312;UBERON:0003914!6.43e-07!118;UBERON:0000483!8.24e-07!309 | |ontology_enrichment_uberon=UBERON:0000914!7.48e-15!83;UBERON:0002329!7.48e-15!83;UBERON:0003077!7.48e-15!83;UBERON:0003059!7.48e-15!83;UBERON:0007282!7.48e-15!83;UBERON:0009618!7.48e-15!83;UBERON:0007285!7.48e-15!83;UBERON:0005256!7.96e-15!143;UBERON:0000475!1.43e-13!365;UBERON:0002100!1.54e-13!216;UBERON:0000486!2.32e-13!82;UBERON:0004290!1.22e-12!70;UBERON:0000468!2.42e-12!659;UBERON:0003104!9.58e-12!238;UBERON:0009142!9.58e-12!238;UBERON:0001134!1.87e-11!61;UBERON:0002036!1.87e-11!61;UBERON:0003082!1.87e-11!61;UBERON:0000481!6.26e-11!347;UBERON:0002385!7.19e-11!63;UBERON:0001015!7.19e-11!63;UBERON:0000383!7.19e-11!63;UBERON:0003102!5.13e-09!95;UBERON:0000478!5.19e-09!24;UBERON:0005631!9.29e-09!14;UBERON:0000158!9.29e-09!14;UBERON:0000490!1.07e-08!138;UBERON:0004923!1.55e-08!57;UBERON:0000480!5.10e-08!626;UBERON:0000467!7.39e-08!625;UBERON:0004872!8.26e-08!84;UBERON:0002199!3.01e-07!45;UBERON:0002416!3.01e-07!45;UBERON:0000477!3.36e-07!286;UBERON:0000119!5.11e-07!312;UBERON:0003914!6.43e-07!118;UBERON:0000483!8.24e-07!309 | ||
|ontology_enrichment_uberon_v019=UBERON:0000478;4.18e-09;24!UBERON:0005631;1.31e-07;10!UBERON:0000158;1.31e-07;10 | |||
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| ||
|short_description=p1@TMEM45A | |short_description=p1@TMEM45A | ||
}} | }} |
Latest revision as of 05:10, 19 September 2015
Short description: | p1@TMEM45A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TMEM45A_5end |
Coexpression cluster: | C4255_Adipocyte_amniotic_Smooth_Chondrocyte_chorionic_Ewing_Preadipocyte |
Association with transcript: | 0bp_to_ENST00000323523, ENST00000403410, NM_018004, uc003dtz.1_5end |
EntrezGene: | TMEM45A |
HGNC: | 25480 |
UniProt: | Q9NWC5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 6.28e-15 | 76 |
muscle precursor cell | 3.32e-12 | 58 |
myoblast | 3.32e-12 | 58 |
multi-potent skeletal muscle stem cell | 3.32e-12 | 58 |
muscle cell | 1.70e-11 | 55 |
extraembryonic cell | 8.31e-11 | 19 |
electrically responsive cell | 3.95e-10 | 61 |
electrically active cell | 3.95e-10 | 61 |
smooth muscle cell | 5.68e-10 | 43 |
smooth muscle myoblast | 5.68e-10 | 43 |
vascular associated smooth muscle cell | 2.48e-08 | 32 |
Ontology term | p-value | n |
---|---|---|
mesenchyme | 1.31e-14 | 160 |
entire embryonic mesenchyme | 1.31e-14 | 160 |
trunk mesenchyme | 2.12e-14 | 122 |
multilaminar epithelium | 1.34e-13 | 83 |
dense mesenchyme tissue | 6.41e-13 | 73 |
somite | 7.26e-13 | 71 |
presomitic mesoderm | 7.26e-13 | 71 |
presumptive segmental plate | 7.26e-13 | 71 |
dermomyotome | 7.26e-13 | 71 |
trunk paraxial mesoderm | 7.26e-13 | 71 |
paraxial mesoderm | 1.88e-12 | 72 |
presumptive paraxial mesoderm | 1.88e-12 | 72 |
skeletal muscle tissue | 1.15e-11 | 62 |
striated muscle tissue | 1.15e-11 | 62 |
myotome | 1.15e-11 | 62 |
epithelial vesicle | 1.90e-11 | 78 |
muscle tissue | 4.46e-11 | 64 |
musculature | 4.46e-11 | 64 |
musculature of body | 4.46e-11 | 64 |
trunk | 1.15e-10 | 199 |
unilaminar epithelium | 8.28e-10 | 148 |
surface structure | 9.07e-10 | 99 |
extraembryonic structure | 4.43e-09 | 24 |
extraembryonic membrane | 7.96e-09 | 14 |
membranous layer | 7.96e-09 | 14 |
organ component layer | 1.03e-08 | 66 |
integument | 9.62e-08 | 46 |
integumental system | 9.62e-08 | 46 |
splanchnic layer of lateral plate mesoderm | 2.29e-07 | 83 |