FFCP PHASE1:Hg19::chr3:110688681..110688685,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:110688681..110688685,- | |||
|description=CAGE_peak_at_chr3:110688681..110688685,- | |description=CAGE_peak_at_chr3:110688681..110688685,- | ||
|id=chr3:110688681..110688685,- | |id=chr3:110688681..110688685,- | ||
|ontology_enrichment_celltype=CL:0000222!2.67e-16!119;CL:0002321!6.20e-16!248;CL:0000220!9.57e-16!246;CL:0000213!2.09e-10!57;CL:0000215!2.09e-10!57;CL:0000066!4.07e-09!254;CL:1000413!9.28e-09!9;CL:0000071!1.14e-08!18;CL:0002546!1.14e-08!18;CL:0002078!1.40e-08!44;CL:0000115!2.66e-08!35;CL:0002139!3.53e-08!24;CL:0000393!1.23e-07!60;CL:0000211!1.23e-07!60;CL:1000497!1.40e-07!18;CL:0002518!1.40e-07!18;CL:1000449!1.59e-07!16;CL:0000183!8.16e-07!59;CL:0000187!8.58e-07!54 | |ontology_enrichment_celltype=CL:0000222!2.67e-16!119;CL:0002321!6.20e-16!248;CL:0000220!9.57e-16!246;CL:0000213!2.09e-10!57;CL:0000215!2.09e-10!57;CL:0000066!4.07e-09!254;CL:1000413!9.28e-09!9;CL:0000071!1.14e-08!18;CL:0002546!1.14e-08!18;CL:0002078!1.40e-08!44;CL:0000115!2.66e-08!35;CL:0002139!3.53e-08!24;CL:0000393!1.23e-07!60;CL:0000211!1.23e-07!60;CL:1000497!1.40e-07!18;CL:0002518!1.40e-07!18;CL:1000449!1.59e-07!16;CL:0000183!8.16e-07!59;CL:0000187!8.58e-07!54 | ||
|ontology_enrichment_celltype_v019=CL:1000497;7.83e-12;17!CL:0002518;7.83e-12;17!CL:1000413;2.43e-11;9!CL:1000507;2.90e-11;10!CL:1000494;2.90e-11;10!CL:1000449;3.13e-11;15!CL:0000071;1.09e-10;18!CL:0000306;1.55e-09;4!CL:0002222;1.55e-09;4!CL:0002224;1.55e-09;4!CL:0002544;3.36e-09;6!CL:0000064;1.68e-08;3!CL:0000067;1.68e-08;3!CL:0005012;1.68e-08;3!CL:0002304;1.68e-08;3!CL:0002139;1.71e-07;24!CL:0002590;2.60e-07;3!CL:0002504;8.36e-07;3!CL:1000279;8.36e-07;3!CL:0000346;8.36e-07;3!CL:1000428;8.36e-07;3!CL:1000280;8.36e-07;3!CL:0000075;9.39e-07;27 | |||
|ontology_enrichment_celltype_v019_2=CL:1000497,6.62e-12,17;CL:0002518,6.62e-12,17;CL:1000449,2.99e-11,15;CL:1000507,3.42e-11,10;CL:1000494,3.42e-11,10;CL:1000413,4.09e-11,9;CL:0000066,1.16e-10,253;CL:0000071,1.61e-10,18;CL:0002546,1.61e-10,18;CL:0002321,1.41e-09,250;CL:0000306,1.65e-09,4;CL:0002222,1.65e-09,4;CL:0002224,1.65e-09,4;CL:0000213,2.05e-09,58;CL:0000215,2.05e-09,58;CL:0002544,4.47e-09,6;CL:0000222,8.43e-09,121;CL:0000064,1.65e-08,3;CL:0000067,1.65e-08,3;CL:0005012,1.65e-08,3;CL:0002304,1.65e-08,3;CL:0002078,8.02e-08,45;CL:0000115,1.49e-07,36;CL:0002139,2.26e-07,24;CL:0002590,2.64e-07,3;CL:0000346,5.57e-07,3;CL:1000428,5.57e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002546;1.09e-10;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!4.95e-12!79;UBERON:0007798!4.95e-12!79;UBERON:0000490!1.27e-11!138;UBERON:0007625!2.82e-11!11;UBERON:0003914!3.23e-11!118;UBERON:0000119!4.13e-10!312;UBERON:0000483!3.47e-09!309;UBERON:0003915!9.28e-09!9;UBERON:0004700!9.28e-09!9;UBERON:0001917!9.28e-09!9;UBERON:0001986!1.14e-08!18;UBERON:0004638!1.14e-08!18;UBERON:0004852!1.14e-08!18;UBERON:0000487!1.53e-08!22;UBERON:0005256!4.47e-08!143;UBERON:0000055!1.31e-07!69;UBERON:0004211!1.59e-07!16;UBERON:0001285!1.59e-07!16;UBERON:0007684!1.59e-07!16;UBERON:0003220!1.59e-07!16;UBERON:0004208!1.59e-07!16;UBERON:0001981!1.79e-07!60;UBERON:0007500!1.79e-07!60;UBERON:0004537!1.79e-07!60;UBERON:0006965!1.79e-07!60;UBERON:0001637!2.06e-07!42;UBERON:0003509!2.06e-07!42;UBERON:0004572!2.06e-07!42;UBERON:0004535!2.70e-07!110;UBERON:0001009!3.13e-07!113;UBERON:0002200!5.35e-07!11;UBERON:0006876!5.35e-07!11;UBERON:0006914!6.55e-07!25;UBERON:0000019!7.27e-07!19;UBERON:0000047!7.27e-07!19;UBERON:0004088!7.27e-07!19;UBERON:0003072!7.27e-07!19;UBERON:0003071!7.27e-07!19;UBERON:0004128!7.27e-07!19;UBERON:0006555!7.33e-07!17;UBERON:0005103!7.33e-07!17;UBERON:0000083!7.33e-07!17;UBERON:0009201!7.33e-07!17;UBERON:0004819!7.33e-07!17;UBERON:0006553!7.33e-07!17;UBERON:0003074!7.33e-07!17;UBERON:0003060!7.33e-07!17;UBERON:0004872!8.14e-07!84 | |||
|ontology_enrichment_uberon_v019=UBERON:0007625;1.16e-19;11!UBERON:0003915;2.43e-11;9!UBERON:0004700;2.43e-11;9!UBERON:0001917;2.43e-11;9!UBERON:0004211;2.90e-11;10!UBERON:0009773;2.90e-11;10!UBERON:0001231;2.90e-11;10!UBERON:0004810;2.90e-11;10!UBERON:0006555;3.13e-11;15!UBERON:0004819;3.13e-11;15!UBERON:0001285;3.13e-11;15!UBERON:0007684;3.13e-11;15!UBERON:0000490;3.86e-11;33!UBERON:0004638;1.09e-10;18!UBERON:0001986;1.09e-10;18!UBERON:0004852;1.09e-10;18!UBERON:0000019;2.02e-10;19!UBERON:0000047;2.02e-10;19!UBERON:0004088;2.02e-10;19!UBERON:0010230;2.02e-10;19!UBERON:0000487;2.74e-10;22!UBERON:0000488;3.44e-10;4!UBERON:0000970;8.66e-10;20!UBERON:0006876;1.26e-09;11!UBERON:0001801;1.28e-09;14!UBERON:0010077;1.55e-09;4!UBERON:0005389;1.55e-09;4!UBERON:0000484;1.55e-09;4!UBERON:0000965;1.55e-09;4!UBERON:0001803;1.55e-09;4!UBERON:0002104;3.22e-09;21!UBERON:0001456;3.22e-09;21!UBERON:0010371;6.30e-09;31!UBERON:0000353;8.32e-09;15!UBERON:0006914;9.24e-09;25!UBERON:0001778;1.68e-08;3!UBERON:0001775;1.68e-08;3!UBERON:0000020;3.14e-08;23!UBERON:0001032;8.46e-08;24!UBERON:0004456;8.46e-08;24!UBERON:0002113;9.50e-08;24!UBERON:0011143;9.50e-08;24!UBERON:0000412;8.36e-07;3!UBERON:0001992;8.36e-07;3!UBERON:0002203;9.37e-07;6!UBERON:0001768;9.37e-07;6!UBERON:0002200;9.37e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007625,8.82e-20,11;UBERON:0004211,2.99e-11,15;UBERON:0009773,2.99e-11,15;UBERON:0001231,2.99e-11,15;UBERON:0001285,2.99e-11,15;UBERON:0007684,2.99e-11,15;UBERON:0004208,2.99e-11,15;UBERON:0004810,3.42e-11,10;UBERON:0003915,4.09e-11,9;UBERON:0004700,4.09e-11,9;UBERON:0001917,4.09e-11,9;UBERON:0004638,1.61e-10,18;UBERON:0001986,1.61e-10,18;UBERON:0004852,1.61e-10,18;UBERON:0006555,1.99e-10,16;UBERON:0004819,1.99e-10,16;UBERON:0000488,2.37e-10,4;UBERON:0000487,3.91e-10,22;UBERON:0000019,7.54e-10,20;UBERON:0000047,7.54e-10,20;UBERON:0010312,7.54e-10,20;UBERON:0004088,7.54e-10,20;UBERON:0010230,7.54e-10,20;UBERON:0003072,7.54e-10,20;UBERON:0004128,7.54e-10,20;UBERON:0003071,7.54e-10,20;UBERON:0006876,1.03e-09,11;UBERON:0001801,1.09e-09,14;UBERON:0005085,1.49e-09,31;UBERON:0010077,1.65e-09,4;UBERON:0005389,1.65e-09,4;UBERON:0000484,1.65e-09,4;UBERON:0002546,1.65e-09,4;UBERON:0000965,1.65e-09,4;UBERON:0001803,1.65e-09,4;UBERON:0003073,1.65e-09,4;UBERON:0005426,1.65e-09,4;UBERON:0000970,2.82e-09,21;UBERON:0002104,2.82e-09,21;UBERON:0000353,8.37e-09,15;UBERON:0001456,9.36e-09,22;UBERON:0006914,1.25e-08,25;UBERON:0001778,1.65e-08,3;UBERON:0001775,1.65e-08,3;UBERON:0000490,2.43e-08,148;UBERON:0000119,4.35e-08,309;UBERON:0000020,7.57e-08,24;UBERON:0001032,7.57e-08,24;UBERON:0004456,7.57e-08,24;UBERON:0003914,7.67e-08,117;UBERON:0000483,9.55e-08,306;UBERON:0005172,3.08e-07,54;UBERON:0005173,3.08e-07,54;UBERON:0002113,4.89e-07,26;UBERON:0003918,4.89e-07,26;UBERON:0011143,4.89e-07,26;UBERON:0005095,4.89e-07,26;UBERON:0007687,4.89e-07,26;UBERON:0002417,5.51e-07,60;UBERON:0000916,5.51e-07,60;UBERON:0000412,5.57e-07,3;UBERON:0001992,5.57e-07,3;UBERON:0002203,7.39e-07,6;UBERON:0001768,7.39e-07,6;UBERON:0002200,7.39e-07,6 | |||
|phase1_expression=0,0,0.140954404095971,1.0007329835313,0.446961094427288,0,0,0,0,4.42321085702716,0.697801167972428,0,0,0,0,0.672325146451775,0.602694528023977,0.730310090387373,0.975865597581014,2.83178433576612,0.612002073732759,2.5076377718247,0.572471974262113,0.684372125364421,1.12988375635323,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,10.1152254365553,15.742787219842,8.69564378361948,0.785874452986276,0,0,0,0,0,0,0,0,1.19257444420023,2.58070378531837,1.04142150482278,2.26123176769604,0.838998872419812,3.30141650328081,1.04497483268405,0,0.35576626268671,0,3.22263453687318,2.28081631715554,0.24406205754817,0.735326160691737,3.24056779152704,0,0,0,3.06633274931766,0,0.916008719652036,0,0,0,0,0,0.264818361626438,0,0,0,1.06748995729705,0,0.311211035399766,0,0,0.454072282934794,0,0.468642863667593,0,0,0,0,0,0.140450806702248,0,0,0,0,0.494533858557114,0,0.718618141816238,0,0,0,0,0,0.150238058906597,0.567160915800105,0,0,0.211931901159562,0,0,0.772921620136887,0.744467425326359,0.337552664482532,0.292311015483596,0.252433774244115,0,0,0,0.201504196455281,0.339121184620975,0,0,0,0.609868530647977,0,0.464775771478074,1.14027160516907,0,4.37972830890996,1.56449532329816,1.28648187638577,1.38134921352481,0,0,0.118306800039844,0,0.241011029883482,0.110293972732394,0,0.237270619111097,0.134831308160164,0,0,0,7.01208869017229,0,0,0,0,0,0,0,1.71567810298526,0,0,0,0,0,0,10.1031939417691,1.27523445472584,5.63561732331944,0.866198686566443,0,0.190254152234598,0,0.858486162094873,0,0,0,0,0.335964256397719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.784917590417525,1.74384027533312,0.51336800074665,0,0,0,0.26593811658487,1.04007436911366,0,0,0,0,0,0,0.65147236858747,0.355391948742546,0,2.1100756394171,1.74306691720059,12.7965428713033,0,0,0,0.958499421966331,1.14861935834114,0,0,0,0,0,0,0,0,0.508189248444927,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,2.27407504055985,0,0,0.368738337083406,0,0,0,0,0,0,0,1.66435439510497,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0.232420756919918,0.241718899183244,0,0.0920809889358963,0.34444334449382,0,0.131124414959424,2.25599806453706,7.62451837333706,3.92174884588428,56.9942976147717,61.958806160118,0,0,1.29549549661284,1.54227252690289,1.08378575017541,0.501689773854853,0.254876273045038,0,16.7906066041634,0,0,1.28225062558195,0.328014645699706,4.55529752530024,0.103041011647722,9.88950220038109,5.61064599459998,0,0,0,0,0.924291702687866,0.307007349452259,0.137836572484531,0.214840489736547,0.290033387828457,0.852266274161009,0.534192213880424,0,0.192190067365106,0,0.10115778085555,0,0,0,0,2.12922412126809,0,0.55597265731176,0.286249773483982,1.116475108079,8.22586504268687,1.5250415513906,0,0,0,0,1.43897966066652,1.09814811894422,1.17812402345686,0.808729926293264,0,0.842516912477962,1.46290121726877,0,0,0,0,0,0,1.99031692572366,0,0,0,0.405820753925408,0.30982349809975,0.281695602532241,0,0.392996164052485,0.7133421029625,0,0,0,0,0.699869440489966,0,0,0,0,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.35227839237992,0,0,0,0,0,0,0,0,0.296964680832639,0,0,0,0,0,0,0,5.52567831062295,0,0,0,0.933118762985422,0,0,0,0,0,0,0,0.0927680981618513,0,3.1251331330228,0.174919999992391,0,0,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0.10893846351899,0,0.0769502585037971,150.517455773889,0,21.4520770139355,0,0.957003479195758,0.274792780205587,0,0,0.784901281975124,0,0,0,0,0,0,0,0,0,0.216388639742091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,9.15252841886715,0,0,0,0,3.78369271437556,0,0,0,0,0,0,2.32971271899477,0,0,0,0.160317640503067,0,0.39961921916426,0,0,0,0,0,0,0.135904206073614,0.104602846312333,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0.429226048136571,0,0,0,0,1.18174773460835,0.906574442192831,1.3480708770837,0,0,0,0,1.44677833618517,0.137539436597234,0.415440338029185,0,0,0,0,0.0788057072991982,0,70.3298241219247,0,0,0,0.662091970365432,0.76280561296425,0,0,0.326587360109409,1.19730191562487,0.082092520749339,0,0.566560457600628,0.146552233678082,0,0,0,0,0,0,0.314408610199332,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0.573409195690071,0,0.0620964029413835,0,0,0,0,0.235265819698172,0,0,0,0.233713309847224,0,0,0,0,0,0,0,0.147855149989634,0,0,0,0,0,0.521745061811734,0,1.14241563650639,0,0,0.214821114084977,0,0.796191777397232,0.400027764663154,0.343395705182793,0.336749488765919,6.30924491143255,99.7770721509831,0.857766365499703,2.87093721161733,0,0.926089897295336,97.6499450980806,0.71635536432595,0,0,0,0.38582807654183,0,0,0,0.911579868532147,0,0,0,0,0.327609848846413,19.9076056090513,0,0,0,0,0,0,1.11903606175556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196295437002051,0.11796972334774,0,0,1.90691047733584,0,0,0,1.41193548092464,0,0,0,0,0,0,0,0,0,0,0,0,0.255524855279191,0,0,0,0,0.0887023701626388,0,4.80166426424772,0,0,0,0,0.078493092850514,0,0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| ||
|short_description=p@chr3:110688681..110688685,- | |short_description=p@chr3:110688681..110688685,- | ||
}} | }} |
Latest revision as of 14:08, 29 July 2015
Short description: | p@chr3:110688681..110688685, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:110688681..110688685, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney cell | 6.62e-12 | 17 |
kidney epithelial cell | 6.62e-12 | 17 |
epithelial cell of nephron | 2.99e-11 | 15 |
kidney tubule cell | 3.42e-11 | 10 |
nephron tubule epithelial cell | 3.42e-11 | 10 |
endothelial cell of artery | 4.09e-11 | 9 |
epithelial cell | 1.16e-10 | 253 |
blood vessel endothelial cell | 1.61e-10 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.61e-10 | 18 |
embryonic cell | 1.41e-09 | 250 |
crystallin accumulating cell | 1.65e-09 | 4 |
vertebrate lens cell | 1.65e-09 | 4 |
lens epithelial cell | 1.65e-09 | 4 |
lining cell | 2.05e-09 | 58 |
barrier cell | 2.05e-09 | 58 |
aortic endothelial cell | 4.47e-09 | 6 |
mesodermal cell | 8.43e-09 | 121 |
ciliated cell | 1.65e-08 | 3 |
ciliated epithelial cell | 1.65e-08 | 3 |
multi-ciliated epithelial cell | 1.65e-08 | 3 |
non-pigmented ciliary epithelial cell | 1.65e-08 | 3 |
meso-epithelial cell | 8.02e-08 | 45 |
endothelial cell | 1.49e-07 | 36 |
endothelial cell of vascular tree | 2.26e-07 | 24 |
smooth muscle cell of the brain vasculature | 2.64e-07 | 3 |
hair follicle dermal papilla cell | 5.57e-07 | 3 |
stem cell of epidermis | 5.57e-07 | 3 |