FFCP PHASE1:Hg19::chr3:127872625..127872632,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8607 | |EntrezGene=8607 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10474 | |HGNC=10474 | ||
|TSSclassifier=strong | |||
|UniProt=E7ETR0 | |UniProt=E7ETR0 | ||
|association_with_transcript=124bp_to_ENST00000464873,uc003ekf.2_5end | |association_with_transcript=124bp_to_ENST00000464873,uc003ekf.2_5end | ||
|cluster_id=chr3:127872625..127872632,- | |||
|description=CAGE_peak_3_at_RUVBL1_5end | |description=CAGE_peak_3_at_RUVBL1_5end | ||
|id=chr3:127872625..127872632,- | |id=chr3:127872625..127872632,- | ||
|ontology_enrichment_celltype=CL:0000557!3.33e-17!71;CL:0002031!1.95e-16!124;CL:0000860!1.09e-15!45;CL:0002057!1.50e-15!42;CL:0000839!2.99e-15!70;CL:0002032!1.93e-14!165;CL:0000837!1.93e-14!165;CL:0000738!2.47e-14!140;CL:0000037!3.66e-14!172;CL:0000566!3.66e-14!172;CL:0000766!5.05e-14!76;CL:0002009!5.39e-14!65;CL:0002087!4.87e-13!119;CL:0000988!8.37e-13!182;CL:0000763!1.39e-12!112;CL:0000049!1.39e-12!112;CL:0002194!1.46e-12!63;CL:0000576!1.46e-12!63;CL:0000040!1.46e-12!63;CL:0000559!1.46e-12!63;CL:0000134!3.14e-08!358;CL:0002320!7.91e-08!365;CL:0002393!9.17e-08!9;CL:0002397!9.17e-08!9;CL:0000219!9.66e-07!390 | |ontology_enrichment_celltype=CL:0000557!3.33e-17!71;CL:0002031!1.95e-16!124;CL:0000860!1.09e-15!45;CL:0002057!1.50e-15!42;CL:0000839!2.99e-15!70;CL:0002032!1.93e-14!165;CL:0000837!1.93e-14!165;CL:0000738!2.47e-14!140;CL:0000037!3.66e-14!172;CL:0000566!3.66e-14!172;CL:0000766!5.05e-14!76;CL:0002009!5.39e-14!65;CL:0002087!4.87e-13!119;CL:0000988!8.37e-13!182;CL:0000763!1.39e-12!112;CL:0000049!1.39e-12!112;CL:0002194!1.46e-12!63;CL:0000576!1.46e-12!63;CL:0000040!1.46e-12!63;CL:0000559!1.46e-12!63;CL:0000134!3.14e-08!358;CL:0002320!7.91e-08!365;CL:0002393!9.17e-08!9;CL:0002397!9.17e-08!9;CL:0000219!9.66e-07!390 | ||
|ontology_enrichment_celltype_v019=CL:0000097;1.61e-14;5!CL:0002393;5.67e-12;6!CL:0002397;5.67e-12;6!CL:0000766;2.94e-11;69!CL:0000163;1.77e-08;9!CL:0000576;8.59e-08;48!CL:0000763;2.85e-07;100!CL:0000875;8.38e-07;3!CL:0000767;8.38e-07;3!CL:0002396;8.38e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.22e-17,72;CL:0002393,5.20e-17,9;CL:0002397,5.20e-17,9;CL:0000839,3.31e-15,66;CL:0000557,5.64e-15,67;CL:0000097,1.61e-14,5;CL:0002028,1.61e-14,5;CL:0000763,2.28e-14,108;CL:0000049,2.28e-14,108;CL:0000860,7.47e-14,42;CL:0002057,7.47e-14,42;CL:0000473,4.22e-12,48;CL:0000234,4.22e-12,48;CL:0002032,1.68e-11,161;CL:0000837,1.68e-11,161;CL:0000738,2.75e-11,136;CL:0000037,5.50e-11,168;CL:0000988,2.20e-10,177;CL:0002031,2.27e-10,120;CL:0002194,1.21e-09,59;CL:0000576,1.21e-09,59;CL:0000040,1.21e-09,59;CL:0000559,1.21e-09,59;CL:0002009,2.52e-09,61;CL:0000163,1.77e-08,9;CL:0000767,6.88e-07,3;CL:0000875,7.28e-07,3;CL:0002396,7.28e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;2.55e-11;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!4.08e-17!80;UBERON:0001474!1.01e-16!86;UBERON:0002405!6.83e-14!115;UBERON:0004765!9.08e-14!101;UBERON:0001434!9.08e-14!101;UBERON:0002390!2.11e-13!102;UBERON:0003061!2.11e-13!102;UBERON:0002193!1.63e-11!112;UBERON:0002384!3.39e-08!375 | |ontology_enrichment_uberon=UBERON:0002371!4.08e-17!80;UBERON:0001474!1.01e-16!86;UBERON:0002405!6.83e-14!115;UBERON:0004765!9.08e-14!101;UBERON:0001434!9.08e-14!101;UBERON:0002390!2.11e-13!102;UBERON:0003061!2.11e-13!102;UBERON:0002193!1.63e-11!112;UBERON:0002384!3.39e-08!375 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.66e-13,76;UBERON:0001474,3.59e-12,82;UBERON:0004765,4.74e-11,90;UBERON:0002405,1.12e-10,93;UBERON:0002390,4.14e-10,98;UBERON:0003061,4.14e-10,98;UBERON:0001434,6.75e-10,100;UBERON:0002193,3.99e-09,108 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,1.57345710739562,0,0,0,0,0,0.0774672005803016,0,0.293600439334847,0,0.200544447470142,0.434021741431704,0,0,0,0,0.377875943688809,0,0.929716147622738,0.822335776043652,0.619412741790207,0,0,0.709446689665756,1.37898272294647,0,1.35426486594342,0.188242339542605,0.272906150057846,0.224723484445085,0,0,0.639337125799041,0,0.398927315243264,0.852449501065388,0.290209238628584,0,0,0.251248665256743,0.521482918420201,0.434377689410233,0,1.10483290796269,0,1.05627643155971,0.425208599930087,1.25795187305026,0.898629049171961,0.750884464207532,0.32145117339416,1.42506371870624,0.59675003159727,0.730656615058536,0,0.546138611262131,0,0.853460445133014,0.800791974072025,1.72425731986345,0,0.954053754535364,0,0.587237189370939,0,0,0,0,0,0,0.205601498999509,0,0.32592226663359,0,0,0,0,0.221533894583621,0,0,0.130059347559878,0.164437904603676,0,0,0.14828656316206,0,0,0,0,0,0.253019692019503,0,0,0,0.150575119077773,0.127986611154418,0,0,0,0.201606743224732,0,0.144824403882799,0,0,0,0,0,0.144846518960824,0,0,0.0945348171640679,0,0,0.130979075497713,0,0,0,0.174129737299267,0,0,0,0,0,0,0,0.56530794192401,0,0.275118041940067,0,0,0,0,0,0,0.732186172644509,0,0,0.267899184852239,0,0.225222960966644,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0.298897361103602,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0.358779271377724,0,0,0,0,0.257640540045629,0,0,0,0.252433774244115,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0.10366105501537,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0.237270619111097,0.134831308160164,0.196221465125346,0,0.738155454624648,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0.462985512576611,0,0,0.858486162094873,0.246217006087397,0.234004265139238,0.148631162288728,0,0.16798212819886,0,0,0,0,0.492663237895943,0.44024217006613,3.52457796419313,0.576479813667846,4.03975786964416,0,0,0,0,0.102827492703324,0,0,0,0,0.1466765716419,0.129271715757778,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0.167516265334349,0.637938751653163,0,0,0,0,0,0,0.415941723061614,0,0,0,0,0,0,0,0.368738337083406,0.0868836144680828,0,0,0,0.215714200818617,0,0.303127571446259,0,0,0,0,0,0,0,0.321707842287215,0,0,0,0,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0.309123034943167,0,0.330037999682352,0,0,0,0,0,0,0.137836572484531,0,0,0.0852266274161009,0.0890320356467374,0,0,0.127612712494584,0,0,0,0,0,0,0.869932992075073,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0,0,0.245040215981032,0.185803175125719,0,0,0,0,0.191505370132367,0.211673582723883,0,0.280797178113459,0,0,0,0,0,0,0.425846237690326,0,0,0,0,0,0,0,0,0.33307196799782,1.4098700508785,0,0.146508179271894,0,0.222886768554957,0,0.71623345421307,0,0.307160702099232,0,0,0,0,0,0,0,0,0.102268682502155,0.615424027305347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.347249989866585,0,0.120596438625408,0,0,0,0,0,0.139423744278603,0.0769502585037971,0,0,0,0,0,0.0915975934018623,0,0,0.31396051279005,0.166211681900156,0.225595660617181,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0.593042257361244,0,0,0,0,0,0,0,0,0,0,0,0,0.901940516486955,0,0,0.661983911750998,0,0,0,0,0.173559738335131,0.293977192243133,0,0.34945333648406,0,0,0.146178634172371,0.0821154570532092,0,0,0,0,0.19871461170299,0,0.195551382734803,0.0801588202515337,0,0.19980960958213,0.288180834308212,0,0,0,0,0.235694034616795,0,0,0,0,0.600420288709789,0.273810757783986,0,0,0.788662062837943,0,0.229160424011684,0,0,0,0.223171457441873,0,0,0,0,0.329663433524666,0.26961417541674,0.196854963029498,0.169346664131569,0,0,0,0,0,0.899895566206002,0.77380195455795,0,0,0.472834243795189,0,0,0,0,0,0,0.25426853765475,0,0,0.326587360109409,0,0.082092520749339,0,0.226624183040251,0,0,0,0,0,0,0.106787412567695,0,0.414239055347196,0,0,0.121792598380896,0,0.544017803369474,0.2506898940227,0,0,0,0,0,0.1251909307065,0,0,0.0620964029413835,0,0.249960815924213,0,0.285465333544967,0.235265819698172,0,0,0.149254802886874,0.233713309847224,0,0.189403005275089,0,0,0,0,0.15543720058278,0.147855149989634,0.159296767163702,0,0,0.414706207840855,0.265841714557995,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0.260994291965212,0.226705925512272,0,0,0,0,0.219284049578707,0,0,0,0,0.345430341731199,0,0.138258436151731,0,0,0,0,0,0,0,0.106691729694141,0.172214979660816,0,0.184105950251841,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0.23658523500376,0,0.352675943690684,0,0,1.41696576325585,0,0.205116364240755,0,0,0,0,0,0,0,0.231051332300676,0.381382095467167,0,0,0,0,0,0.261906694481422,0,0.443568258651136,0,0,0,0,0,0,0,0,0.383287282918786,0,0,0,0,0.0887023701626388,0,0.514464028312255,0,0,0.118193840883968,0,0.078493092850514,0,0,0,0,0,0.0714765441766563,0,0.116241425368125,0,0.801711364730253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| ||
|short_description=p3@RUVBL1 | |short_description=p3@RUVBL1 | ||
}} | }} |
Latest revision as of 06:35, 20 September 2015
Short description: | p3@RUVBL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_RUVBL1_5end |
Coexpression cluster: | NA |
Association with transcript: | 124bp_to_ENST00000464873, uc003ekf.2_5end |
EntrezGene: | RUVBL1 |
HGNC: | 10474 |
UniProt: | E7ETR0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 1.22e-17 | 72 |
intermediate monocyte | 5.20e-17 | 9 |
CD14-positive, CD16-positive monocyte | 5.20e-17 | 9 |
myeloid lineage restricted progenitor cell | 3.31e-15 | 66 |
granulocyte monocyte progenitor cell | 5.64e-15 | 67 |
mast cell | 1.61e-14 | 5 |
basophil mast progenitor cell | 1.61e-14 | 5 |
myeloid cell | 2.28e-14 | 108 |
common myeloid progenitor | 2.28e-14 | 108 |
classical monocyte | 7.47e-14 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.47e-14 | 42 |
defensive cell | 4.22e-12 | 48 |
phagocyte | 4.22e-12 | 48 |
hematopoietic oligopotent progenitor cell | 1.68e-11 | 161 |
hematopoietic multipotent progenitor cell | 1.68e-11 | 161 |
leukocyte | 2.75e-11 | 136 |
hematopoietic stem cell | 5.50e-11 | 168 |
hematopoietic cell | 2.20e-10 | 177 |
hematopoietic lineage restricted progenitor cell | 2.27e-10 | 120 |
monopoietic cell | 1.21e-09 | 59 |
monocyte | 1.21e-09 | 59 |
monoblast | 1.21e-09 | 59 |
promonocyte | 1.21e-09 | 59 |
macrophage dendritic cell progenitor | 2.52e-09 | 61 |
endocrine cell | 1.77e-08 | 9 |
basophil | 6.88e-07 | 3 |
non-classical monocyte | 7.28e-07 | 3 |
CD14-low, CD16-positive monocyte | 7.28e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.66e-13 | 76 |
bone element | 3.59e-12 | 82 |
skeletal element | 4.74e-11 | 90 |
immune system | 1.12e-10 | 93 |
hematopoietic system | 4.14e-10 | 98 |
blood island | 4.14e-10 | 98 |
skeletal system | 6.75e-10 | 100 |
hemolymphoid system | 3.99e-09 | 108 |