FFCP PHASE1:Hg19::chr14:92361339..92361353,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr14:92361339..92361353,-
|short_description=p@chr14:92361339..92361353,-
|description=CAGE_peak_at_chr14:92361339..92361353,-
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr14:92361339..92361353,- | |||
|coexpression_cluster_id=C470 | |||
|description=CAGE_peak_at_chr14:92361339..92361353,- | |||
|id=chr14:92361339..92361353,- | |||
|ontology_enrichment_celltype=CL:0000057!1.06e-30!75;CL:0000055!2.18e-25!180;CL:0002620!1.48e-16!23;CL:0002334!1.50e-11!12;CL:0000048!2.62e-08!430;CL:0000680!8.11e-08!57;CL:0000056!8.11e-08!57;CL:0000355!8.11e-08!57;CL:0000723!1.04e-07!436;CL:0000136!4.37e-07!15;CL:0000034!5.85e-07!444 | |||
|ontology_enrichment_celltype_v019=CL:0002334;9.34e-19;12!CL:0002620;1.68e-13;23!CL:0000057;1.04e-12;73!CL:0000136;8.07e-12;13!CL:0002551;1.77e-09;6!CL:0002615;6.01e-09;3!CL:0002579;1.14e-08;3!CL:0002580;3.57e-08;3!CL:0002504;8.36e-08;3!CL:1000279;8.36e-08;3!CL:1000280;8.36e-08;3!CL:0002559;1.69e-07;5!CL:0002622;1.81e-07;3!CL:0000346;3.83e-07;3!CL:1000428;3.83e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.12e-29,76;CL:0002334,1.27e-18,12;CL:0002620,6.30e-14,23;CL:0000136,4.12e-12,15;CL:0002551,1.24e-09,6;CL:0000048,1.28e-09,427;CL:0000723,2.95e-09,433;CL:0002615,6.18e-09,3;CL:0000034,8.57e-09,441;CL:0002579,1.13e-08,3;CL:0002580,2.08e-08,3;CL:0002504,5.18e-08,3;CL:1000279,5.18e-08,3;CL:1000280,5.18e-08,3;CL:0002559,7.60e-08,5;CL:0000346,1.41e-07,3;CL:1000428,1.41e-07,3;CL:0002622,1.69e-07,3;CL:0000134,2.34e-07,354;CL:0002320,5.78e-07,361 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060084;2.26e-08;3!DOID:127;2.26e-08;3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,2.19e-08,3;DOID:127,2.19e-08,3 | |||
|ontology_enrichment_uberon=UBERON:0003102!2.89e-17!95;UBERON:0002199!6.92e-16!45;UBERON:0002416!6.92e-16!45;UBERON:0000914!6.49e-14!83;UBERON:0002329!6.49e-14!83;UBERON:0003077!6.49e-14!83;UBERON:0003059!6.49e-14!83;UBERON:0007282!6.49e-14!83;UBERON:0009618!6.49e-14!83;UBERON:0007285!6.49e-14!83;UBERON:0002097!1.63e-12!40;UBERON:0004290!2.57e-12!70;UBERON:0000486!1.27e-10!82;UBERON:0000475!1.79e-10!365;UBERON:0002067!4.18e-09!9;UBERON:0004016!4.18e-09!9;UBERON:0010083!4.18e-09!9;UBERON:0002100!1.97e-08!216;UBERON:0004923!2.66e-08!57;UBERON:0005256!3.41e-08!143;UBERON:0002385!4.09e-08!63;UBERON:0001015!4.09e-08!63;UBERON:0000383!4.09e-08!63;UBERON:0003688!7.04e-08!6;UBERON:0002358!7.04e-08!6;UBERON:0003684!7.04e-08!6;UBERON:0001178!7.04e-08!6;UBERON:0004457!1.50e-07!12;UBERON:0000042!1.50e-07!12;UBERON:0001134!1.98e-07!61;UBERON:0002036!1.98e-07!61;UBERON:0003082!1.98e-07!61;UBERON:0000468!5.48e-07!659 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;6.33e-16;6!UBERON:0002358;6.33e-16;6!UBERON:0003684;6.33e-16;6!UBERON:0001178;6.33e-16;6!UBERON:0002067;7.09e-15;9!UBERON:0004457;1.77e-13;9!UBERON:0000042;1.77e-13;9!UBERON:0002199;5.76e-12;46!UBERON:0002416;5.76e-12;46!UBERON:0003102;2.37e-11;50!UBERON:0002097;1.90e-10;41!UBERON:0004923;4.56e-08;55!UBERON:0002072;1.28e-07;5!UBERON:0002073;1.69e-07;5!UBERON:0000412;3.83e-07;3!UBERON:0001992;3.83e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002199,3.54e-18,46;UBERON:0002416,3.54e-18,46;UBERON:0003102,3.47e-17,99;UBERON:0003688,6.45e-16,6;UBERON:0002358,6.45e-16,6;UBERON:0003684,6.45e-16,6;UBERON:0001178,6.45e-16,6;UBERON:0002067,2.03e-15,9;UBERON:0004016,2.03e-15,9;UBERON:0010083,2.03e-15,9;UBERON:0002097,1.40e-13,41;UBERON:0004923,1.71e-11,66;UBERON:0004457,9.38e-10,12;UBERON:0000042,9.38e-10,12;UBERON:0007524,2.18e-09,73;UBERON:0002100,5.13e-09,199;UBERON:0002329,9.86e-09,71;UBERON:0003059,9.86e-09,71;UBERON:0007282,9.86e-09,71;UBERON:0004290,9.86e-09,71;UBERON:0009618,9.86e-09,71;UBERON:0003077,1.53e-08,72;UBERON:0007285,1.53e-08,72;UBERON:0002073,7.60e-08,5;UBERON:0005086,7.60e-08,5;UBERON:0000412,1.41e-07,3;UBERON:0001992,1.41e-07,3;UBERON:0000486,1.43e-07,83;UBERON:0007503,1.68e-07,78;UBERON:0002072,2.50e-07,5;UBERON:0005256,2.87e-07,122;UBERON:0002384,7.22e-07,371 | |||
|phase1_expression=10.3556676184217,11.5614282901131,10.007762690814,23.01685862122,24.1358990990735,16.574431957907,15.1979926900986,0.631719873426831,1.04474251279935,0,0,0,0,0,0.662794751455832,1.34465029290355,0,0,0,0,0,0.313454721478088,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272906150057846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383587685530591,0,1.50401373190767,0.434539556882471,0,0.973269740605272,0,0,0,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.62028389576352,0,0,0,0,0,0,0,0,0,0,0.759783069987479,0,3.15520282823695,1.06400514659507,1.12135520028461,0,0,0,0.134710672069688,0.163461903113459,0.454072282934794,0,0.70296429550139,0.624320153660641,1.1409436430889,1.64393548606981,1.52664848236894,2.5899671098901,2.66856532734272,0.204154171254893,0.61417158655884,0.619954687054593,1.18800285728205,2.71993622206413,0,1.43723628363248,1.5150250255866,1.7516592782075,0.277064115484183,0,2.45190236639216,1.05166641234618,0.113432183160021,0.717558542755448,1.49490172172997,1.90738711043606,1.20036438433761,0.721367704669072,0.772921620136887,1.48893485065272,0.843881661206331,1.85130309806277,1.26216887122057,1.47279837827679,2.26304479546337,0.355009592516614,0.503760491138201,0.67824236924195,0.193260853163297,0,0,0,0,0,0,0,0,1.56449532329816,1.92972281457866,1.38134921352481,3.71494342425583,0.721879481669586,0.236613600079688,0,0,0.110293972732394,0,0.237270619111097,0,0,0,0,0,0,4.41026134156626,0,0,0,0,0,0.343135620597051,0,0,0,0,0.325808305310325,0,0,0,0.117408694235822,0,0.462985512576611,0.190254152234598,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205654985406647,0,0,0,0,0.1466765716419,0.646358578788889,0,0.845302752556,0.797814349754612,0,0,0,0.266422179016099,1.28680194292333,0,0.823240336780769,0.325736184293735,0.710783897485092,0,0,1.74306691720059,0.199945982364114,0,0,0,0.239624855491583,0,0,1.88215698667853,0.821905290201534,0.537182889719687,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0.500170521059677,0,1.45579603071565,3.92543775353756,1.26161932027148,0.234282829985426,0.300946099727719,0,1.03473071292505,0,0,1.21637060255316,0.195801157462741,0,0,0,0,0,0,0,6.69891081110698,1.84154367945675,6.45518217196069,5.25370511948374,7.16390148693385,4.82561763430822,20.7785293022987,1.3878872442239,1.06537035187876,0.164254312027618,1.03850885836724,0.697262270759755,0,0,0,1.37777337797528,1.45672934405374,2.09799063935079,0,0,0,0,0,0,0,0,0,0,0,0,0.831076008928724,0,0,0,0,0.328014645699706,0,0.103041011647722,0,0,0,0,0,0.096670718292122,0.308097234229289,0.307007349452259,1.10269257987624,0.966782203814463,1.45016693914229,0.255679882248303,0.178064071293475,0,0.192190067365106,0,0,0.929691098594572,3.1481234683064,0,0,0,0,0.74129687641568,0,0.372158369359667,0,0.38126038784765,1.02359116524534,0,0,0.78494864019923,2.33834194858309,2.74537029736055,1.64937363283961,0,0,0,4.8763373908959,0.487426979262569,0,0.272999822815972,1.83827061539827,0,0.551365343546124,1.32687795048244,0.876901770507525,0,0.655894752046633,0,0.30982349809975,0,0,0.0982490410131212,0,0,1.26664581178598,0.987884678879706,0,1.04980416073495,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,4.78195171802567,0.276283915531148,0,0,0,0.311039587661807,0,0,0,0.295930216910801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0.230850775511391,0,0,0,0.217294743844016,0,1.19076871422421,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.789168805698781,1.20990716048664,0,0.252746318513952,0,0,0,0,0,0,0,0,0.694238953340524,0,0,0,0,0,0,0,0.0969890164884194,0,0.90392296312213,0,0,0,0,0,2.13452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11712960508902,0.458320848023367,0.717873024576814,0.199679000498991,0.429226048136571,0.223171457441873,0.0671834724867263,1.08089965062721,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0.236417121897595,0.314727528809989,0,0,0,0,0,0,2.71499800876856,4.32110745600634,3.91904832131291,0,0,1.02232813071253,0,0.146552233678082,0,0.129282956361551,0,0,0,0.427149650270779,0,0.414239055347196,0,0,0,0,0,0.2506898940227,0,0,0,0,0.366078794705889,0,0,0,0,0,0,0,0,0,0,0,0.298509605773748,0.701139929541673,0,0.378806010550178,0.251567901752575,0.889811221596536,0.457680136793847,0.453692771289717,0.310874401165561,0,0.159296767163702,0,0,0.829412415681711,0.265841714557995,0,0,0.380805212168795,0,0,0,0.464033759878494,0.796191777397232,0,0,1.01024846629776,0,0,0,0,0,0,0,0,0.617602894321944,0,0.176689145945881,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0.552317850755522,0,0,0,0,0,0,0,0.850299680406731,0,0,0.318004350653419,0,0,1.76337971845342,3.062454773532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0,0,0.413373593002368,0,0,0,0.496211178389294,0,0,0,0,0,0,0.088702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| ||
|short_description=p@chr14:92361339..92361353,- | |||
}} | }} |
Latest revision as of 23:38, 24 July 2015
Short description: | p@chr14:92361339..92361353, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr14:92361339..92361353, - |
Coexpression cluster: | C470_Adipocyte_Preadipocyte_Smooth_Fibroblast_aorta_normal_Mesenchymal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.12e-29 | 76 |
preadipocyte | 1.27e-18 | 12 |
skin fibroblast | 6.30e-14 | 23 |
fat cell | 4.12e-12 | 15 |
fibroblast of dermis | 1.24e-09 | 6 |
multi fate stem cell | 1.28e-09 | 427 |
somatic stem cell | 2.95e-09 | 433 |
adipocyte of omentum tissue | 6.18e-09 | 3 |
stem cell | 8.57e-09 | 441 |
omentum preadipocyte | 1.13e-08 | 3 |
preadipocyte of the breast | 2.08e-08 | 3 |
enteric smooth muscle cell | 5.18e-08 | 3 |
smooth muscle cell of large intestine | 5.18e-08 | 3 |
smooth muscle cell of colon | 5.18e-08 | 3 |
hair follicle cell | 7.60e-08 | 5 |
hair follicle dermal papilla cell | 1.41e-07 | 3 |
stem cell of epidermis | 1.41e-07 | 3 |
prostate stromal cell | 1.69e-07 | 3 |
mesenchymal cell | 2.34e-07 | 354 |
connective tissue cell | 5.78e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
integument | 3.54e-18 | 46 |
integumental system | 3.54e-18 | 46 |
surface structure | 3.47e-17 | 99 |
omentum | 6.45e-16 | 6 |
peritoneum | 6.45e-16 | 6 |
abdominal cavity | 6.45e-16 | 6 |
visceral peritoneum | 6.45e-16 | 6 |
dermis | 2.03e-15 | 9 |
dermatome | 2.03e-15 | 9 |
future dermis | 2.03e-15 | 9 |
skin of body | 1.40e-13 | 41 |
organ component layer | 1.71e-11 | 66 |
cavity lining | 9.38e-10 | 12 |
serous membrane | 9.38e-10 | 12 |
dense mesenchyme tissue | 2.18e-09 | 73 |
trunk | 5.13e-09 | 199 |
somite | 9.86e-09 | 71 |
presomitic mesoderm | 9.86e-09 | 71 |
presumptive segmental plate | 9.86e-09 | 71 |
dermomyotome | 9.86e-09 | 71 |
trunk paraxial mesoderm | 9.86e-09 | 71 |
paraxial mesoderm | 1.53e-08 | 72 |
presumptive paraxial mesoderm | 1.53e-08 | 72 |
hair follicle | 7.60e-08 | 5 |
hair follicle placode | 7.60e-08 | 5 |
dermal papilla | 1.41e-07 | 3 |
papillary layer of dermis | 1.41e-07 | 3 |
multilaminar epithelium | 1.43e-07 | 83 |
epithelial vesicle | 1.68e-07 | 78 |
hypodermis | 2.50e-07 | 5 |
trunk mesenchyme | 2.87e-07 | 122 |
connective tissue | 7.22e-07 | 371 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 2.19e-08 | 3 |
leiomyoma | 2.19e-08 | 3 |