FFCP PHASE1:Hg19::chr14:94847233..94847268,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr14:94847233..94847268,-
|short_description=p20@SERPINA1
|description=CAGE_peak_20_at_SERPINA1_5end
|association_with_transcript=0bp_to_X02920_5end
|EntrezGe...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5265 | |EntrezGene=5265 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=8941 | |HGNC=8941 | ||
|TSSclassifier=strong | |||
|UniProt=P01009 | |UniProt=P01009 | ||
|association_with_transcript=0bp_to_X02920_5end | |||
|cluster_id=chr14:94847233..94847268,- | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_20_at_SERPINA1_5end | |||
|id=chr14:94847233..94847268,- | |||
|ontology_enrichment_celltype=CL:0002057!7.57e-61!42;CL:0000860!6.69e-56!45;CL:0000766!1.06e-46!76;CL:0002194!5.14e-44!63;CL:0000576!5.14e-44!63;CL:0000040!5.14e-44!63;CL:0000559!5.14e-44!63;CL:0002009!2.98e-42!65;CL:0000839!2.75e-38!70;CL:0000557!1.47e-37!71;CL:0000763!6.93e-27!112;CL:0000049!6.93e-27!112;CL:0000738!3.16e-25!140;CL:0002087!4.96e-24!119;CL:0002031!3.66e-20!124;CL:0000037!1.31e-17!172;CL:0000566!1.31e-17!172;CL:0002032!4.05e-17!165;CL:0000837!4.05e-17!165;CL:0000988!8.30e-16!182;CL:0002393!1.14e-11!9;CL:0002397!1.14e-11!9;CL:0000181!7.04e-10!12;CL:0000417!7.04e-10!12;CL:0000668!7.04e-10!12;CL:0000414!7.04e-10!12;CL:0000412!7.04e-10!12;CL:0000182!7.04e-10!12;CL:0000094!4.75e-08!8;CL:0000775!3.99e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.30e-25;33!CL:0002057;1.30e-25;33!CL:0000182;6.60e-20;12!CL:0000473;7.21e-20;39!CL:0000234;7.21e-20;39!CL:0000775;1.96e-15;3!CL:0000576;7.28e-15;48!CL:0000766;1.42e-11;69!CL:0000763;9.32e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.71e-28,42;CL:0002057,3.71e-28,42;CL:0000473,2.39e-27,48;CL:0000234,2.39e-27,48;CL:0000766,1.47e-23,72;CL:0002194,4.58e-21,59;CL:0000576,4.58e-21,59;CL:0000040,4.58e-21,59;CL:0000559,4.58e-21,59;CL:0002009,2.96e-20,61;CL:0000182,7.51e-20,12;CL:0000839,1.92e-18,66;CL:0000557,4.11e-18,67;CL:0000775,1.53e-15,3;CL:0000763,3.27e-14,108;CL:0000049,3.27e-14,108;CL:0000738,1.27e-11,136;CL:0002087,3.00e-10,115;CL:0002031,1.17e-09,120;CL:0002032,4.31e-09,161;CL:0000837,4.31e-09,161;CL:0000037,1.61e-08,168;CL:0000988,7.44e-08,177 | |||
|ontology_enrichment_development_v019=CL:0002057;5.37e-20;42!UBERON:0004161;5.18e-16;11!UBERON:0009497;1.88e-13;13!UBERON:0001041;2.22e-09;30!UBERON:0003104;3.16e-09;31 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.17e-38!102;UBERON:0003061!1.17e-38!102;UBERON:0002405!1.92e-38!115;UBERON:0002193!2.62e-35!112;UBERON:0002371!7.57e-32!80;UBERON:0001474!1.04e-28!86;UBERON:0004765!1.59e-22!101;UBERON:0001434!1.59e-22!101;UBERON:0003081!6.93e-13!216;UBERON:0009497!5.10e-12!25;UBERON:0000015!5.10e-12!25;UBERON:0002423!5.10e-12!25;UBERON:0006235!5.10e-12!25;UBERON:0004161!5.10e-12!25;UBERON:0008835!1.90e-10!22;UBERON:0003894!1.90e-10!22;UBERON:0002204!3.11e-10!167;UBERON:0009854!7.43e-10!23;UBERON:0005057!1.16e-09!26;UBERON:0002107!4.81e-09!19;UBERON:0006925!4.81e-09!19;UBERON:0008836!4.81e-09!19;UBERON:0007499!8.10e-09!25;UBERON:0009856!2.32e-08!26;UBERON:0000926!3.03e-08!448;UBERON:0004120!3.03e-08!448;UBERON:0006603!3.03e-08!448;UBERON:0005172!2.27e-07!55;UBERON:0005173!2.27e-07!55 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;3.21e-20;19!UBERON:0006925;3.21e-20;19!UBERON:0002423;5.71e-15;25!UBERON:0002365;1.99e-11;31!UBERON:0002330;1.99e-11;31!UBERON:0002368;5.02e-10;33!UBERON:0000949;3.21e-07;43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,3.56e-20,19;UBERON:0006925,3.56e-20,19;UBERON:0008836,3.56e-20,19;UBERON:0008835,3.38e-17,22;UBERON:0003894,3.38e-17,22;UBERON:0009854,2.23e-16,23;UBERON:0002371,1.58e-15,76;UBERON:0007499,6.18e-15,25;UBERON:0009497,6.18e-15,25;UBERON:0000015,6.18e-15,25;UBERON:0002423,6.18e-15,25;UBERON:0006235,6.18e-15,25;UBERON:0004161,6.18e-15,25;UBERON:0009856,2.68e-14,26;UBERON:0002390,3.16e-14,98;UBERON:0003061,3.16e-14,98;UBERON:0001474,4.06e-14,82;UBERON:0004765,1.57e-12,90;UBERON:0002193,1.62e-12,108;UBERON:0002405,5.26e-12,93;UBERON:0002365,1.00e-11,31;UBERON:0002330,1.00e-11,31;UBERON:0001434,6.64e-11,100;UBERON:0002368,3.36e-10,35;UBERON:0005172,4.12e-09,54;UBERON:0005173,4.12e-09,54;UBERON:0002417,5.51e-08,60;UBERON:0000916,5.51e-08,60;UBERON:0000949,1.41e-07,45;UBERON:0003929,1.75e-07,54 | |||
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| ||
|short_description=p20@SERPINA1 | |||
}} | }} |
Latest revision as of 17:54, 16 September 2015
Short description: | p20@SERPINA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_20_at_SERPINA1_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 0bp_to_X02920_5end |
EntrezGene: | SERPINA1 |
HGNC: | 8941 |
UniProt: | P01009 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.71e-28 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.71e-28 | 42 |
defensive cell | 2.39e-27 | 48 |
phagocyte | 2.39e-27 | 48 |
myeloid leukocyte | 1.47e-23 | 72 |
monopoietic cell | 4.58e-21 | 59 |
monocyte | 4.58e-21 | 59 |
monoblast | 4.58e-21 | 59 |
promonocyte | 4.58e-21 | 59 |
macrophage dendritic cell progenitor | 2.96e-20 | 61 |
hepatocyte | 7.51e-20 | 12 |
myeloid lineage restricted progenitor cell | 1.92e-18 | 66 |
granulocyte monocyte progenitor cell | 4.11e-18 | 67 |
neutrophil | 1.53e-15 | 3 |
myeloid cell | 3.27e-14 | 108 |
common myeloid progenitor | 3.27e-14 | 108 |
leukocyte | 1.27e-11 | 136 |
nongranular leukocyte | 3.00e-10 | 115 |
hematopoietic lineage restricted progenitor cell | 1.17e-09 | 120 |
hematopoietic oligopotent progenitor cell | 4.31e-09 | 161 |
hematopoietic multipotent progenitor cell | 4.31e-09 | 161 |
hematopoietic stem cell | 1.61e-08 | 168 |
hematopoietic cell | 7.44e-08 | 177 |
Ontology term | p-value | n |
---|---|---|
liver | 3.56e-20 | 19 |
digestive gland | 3.56e-20 | 19 |
liver bud | 3.56e-20 | 19 |
hepatic diverticulum | 3.38e-17 | 22 |
liver primordium | 3.38e-17 | 22 |
digestive tract diverticulum | 2.23e-16 | 23 |
bone marrow | 1.58e-15 | 76 |
epithelial sac | 6.18e-15 | 25 |
epithelium of foregut-midgut junction | 6.18e-15 | 25 |
anatomical boundary | 6.18e-15 | 25 |
hepatobiliary system | 6.18e-15 | 25 |
foregut-midgut junction | 6.18e-15 | 25 |
septum transversum | 6.18e-15 | 25 |
sac | 2.68e-14 | 26 |
hematopoietic system | 3.16e-14 | 98 |
blood island | 3.16e-14 | 98 |
bone element | 4.06e-14 | 82 |
skeletal element | 1.57e-12 | 90 |
hemolymphoid system | 1.62e-12 | 108 |
immune system | 5.26e-12 | 93 |
exocrine gland | 1.00e-11 | 31 |
exocrine system | 1.00e-11 | 31 |
skeletal system | 6.64e-11 | 100 |
endocrine gland | 3.36e-10 | 35 |
abdomen element | 4.12e-09 | 54 |
abdominal segment element | 4.12e-09 | 54 |
abdominal segment of trunk | 5.51e-08 | 60 |
abdomen | 5.51e-08 | 60 |
endocrine system | 1.41e-07 | 45 |
gut epithelium | 1.75e-07 | 54 |