FFCP PHASE1:Hg19::chr5:17302742..17302760,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:17302742..17302760,- | |||
|coexpression_cluster_id=C39 | |||
|description=CAGE_peak_at_chr5:17302742..17302760,- | |description=CAGE_peak_at_chr5:17302742..17302760,- | ||
|id=chr5:17302742..17302760,- | |id=chr5:17302742..17302760,- | ||
|ontology_enrichment_celltype=CL:0002150!1.52e-17!3;CL:0000861!1.52e-17!3;CL:0000594!5.61e-08!3 | |ontology_enrichment_celltype=CL:0002150!1.52e-17!3;CL:0000861!1.52e-17!3;CL:0000594!5.61e-08!3 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0007297;3.61e-34;2 | |||
|ontology_enrichment_disease=DOID:305!7.33e-09!106;DOID:0050687!8.89e-08!143;DOID:5662!3.17e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:4556;3.27e-23;3!DOID:3908;1.60e-14;5!DOID:3905;1.12e-08;9 | |||
|ontology_enrichment_disease_v019_2=DOID:4556,3.27e-23,3;DOID:3908,1.60e-14,5;DOID:3905,1.12e-08,9 | |||
|ontology_enrichment_uberon=UBERON:0001737!3.92e-30!9;UBERON:0001557!8.10e-14!19;UBERON:0008947!1.14e-10!38;UBERON:0003258!1.14e-10!38;UBERON:0000072!1.50e-08!46;UBERON:0001301!2.09e-07!1;UBERON:0007195!2.36e-07!1;UBERON:0000065!3.17e-07!53 | |ontology_enrichment_uberon=UBERON:0001737!3.92e-30!9;UBERON:0001557!8.10e-14!19;UBERON:0008947!1.14e-10!38;UBERON:0003258!1.14e-10!38;UBERON:0000072!1.50e-08!46;UBERON:0001301!2.09e-07!1;UBERON:0007195!2.36e-07!1;UBERON:0000065!3.17e-07!53 | ||
|ontology_enrichment_uberon_v019=UBERON:0001301;1.23e-66;1!UBERON:0007195;4.66e-66;1!UBERON:0006947;2.62e-23;3!UBERON:0004054;2.62e-23;3!UBERON:0005904;7.35e-18;4!UBERON:0000058;5.73e-08;10!UBERON:0003135;2.32e-07;11!UBERON:0002371;8.38e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001301,1.23e-66,1;UBERON:0007195,4.66e-66,1;UBERON:0006947,2.62e-23,3;UBERON:0004054,2.62e-23,3;UBERON:0005904,7.35e-18,4;UBERON:0005103,1.24e-09,8;UBERON:0000083,1.24e-09,8;UBERON:0009201,1.24e-09,8;UBERON:0006553,1.24e-09,8;UBERON:0003074,1.24e-09,8;UBERON:0003060,1.24e-09,8;UBERON:0000080,1.04e-08,9;UBERON:0002120,1.04e-08,9;UBERON:0004875,1.04e-08,9;UBERON:0005721,1.04e-08,9;UBERON:0005754,1.04e-08,9;UBERON:0007297,1.04e-08,9;UBERON:0003135,2.32e-07,11;UBERON:0004876,2.32e-07,11;UBERON:0003887,7.48e-07,12 | |||
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|short_description=p@chr5:17302742..17302760,- | |short_description=p@chr5:17302742..17302760,- | ||
}} | }} |
Latest revision as of 13:18, 30 July 2015
Short description: | p@chr5:17302742..17302760, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:17302742..17302760, - |
Coexpression cluster: | C39_epididymis_ductus_seminal_testis_acute_thyroid_CD133 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epididymis | 1.23e-66 | 1 |
stroma of bone marrow | 4.66e-66 | 1 |
male genital duct | 2.62e-23 | 3 |
internal male genitalia | 2.62e-23 | 3 |
duct of male reproductive system | 7.35e-18 | 4 |
mesonephric epithelium | 1.24e-09 | 8 |
mesonephric tubule | 1.24e-09 | 8 |
nephric duct | 1.24e-09 | 8 |
renal duct | 1.24e-09 | 8 |
mesonephric duct | 1.24e-09 | 8 |
pronephric duct | 1.24e-09 | 8 |
mesonephros | 1.04e-08 | 9 |
pronephros | 1.04e-08 | 9 |
nephrogenic cord | 1.04e-08 | 9 |
pronephric mesoderm | 1.04e-08 | 9 |
rostral part of nephrogenic cord | 1.04e-08 | 9 |
presumptive pronephric mesoderm | 1.04e-08 | 9 |
male reproductive organ | 2.32e-07 | 11 |
urogenital ridge | 2.32e-07 | 11 |
intraembryonic coelom | 7.48e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
lung large cell carcinoma | 3.27e-23 | 3 |
non-small cell lung carcinoma | 1.60e-14 | 5 |
lung carcinoma | 1.12e-08 | 9 |