FFCP PHASE1:Hg19::chr6:12311473..12311497,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:12311473..12311497,- | |||
|description=CAGE_peak_at_chr6:12311473..12311497,- | |description=CAGE_peak_at_chr6:12311473..12311497,- | ||
|id=chr6:12311473..12311497,- | |id=chr6:12311473..12311497,- | ||
|ontology_enrichment_celltype=CL:0000066!1.10e-30!254;CL:0002368!1.05e-13!13;CL:0002159!3.56e-12!13;CL:0002077!5.01e-11!33;CL:0000244!1.00e-10!4;CL:0000731!1.00e-10!4;CL:0002076!2.31e-07!43;CL:0000220!5.18e-07!246;CL:0002321!7.13e-07!248;CL:0000064!7.28e-07!3;CL:0005012!7.28e-07!3;CL:0000067!7.28e-07!3;CL:0002304!7.28e-07!3;CL:0002166!7.60e-07!3 | |ontology_enrichment_celltype=CL:0000066!1.10e-30!254;CL:0002368!1.05e-13!13;CL:0002159!3.56e-12!13;CL:0002077!5.01e-11!33;CL:0000244!1.00e-10!4;CL:0000731!1.00e-10!4;CL:0002076!2.31e-07!43;CL:0000220!5.18e-07!246;CL:0002321!7.13e-07!248;CL:0000064!7.28e-07!3;CL:0005012!7.28e-07!3;CL:0000067!7.28e-07!3;CL:0002304!7.28e-07!3;CL:0002166!7.60e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000244;4.51e-23;4!CL:0000731;4.51e-23;4!CL:0002368;9.92e-20;13!CL:0000575;1.04e-11;2!CL:0002202;6.98e-10;9!CL:0002632;6.98e-10;9!CL:0000307;2.84e-08;3!CL:0000082;4.91e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000244,5.05e-23,4;CL:0000731,5.05e-23,4;CL:0002368,6.46e-20,13;CL:0000066,1.88e-13,253;CL:0000575,1.26e-11,2;CL:0002202,5.66e-10,9;CL:0002632,5.66e-10,9;CL:0000068,2.74e-08,3;CL:0000069,2.74e-08,3;CL:0000307,2.74e-08,3;CL:0000377,2.74e-08,3;CL:0002076,3.41e-07,42;CL:0000082,3.97e-07,19 | |||
|ontology_enrichment_development_v019=CL:0000377;2.84e-08;3 | |||
|ontology_enrichment_disease=DOID:305!1.21e-09!106 | |||
|ontology_enrichment_disease_v019=DOID:4929;4.42e-12;2!DOID:3111;5.26e-07;1!DOID:3603;5.26e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4929,5.53e-12,2;DOID:3111,4.97e-07,1;DOID:3603,4.97e-07,1 | |||
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| ||
|short_description=p@chr6:12311473..12311497,- | |short_description=p@chr6:12311473..12311497,- | ||
}} | }} |
Latest revision as of 18:58, 30 July 2015
Short description: | p@chr6:12311473..12311497, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:12311473..12311497, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
transitional epithelial cell | 5.05e-23 | 4 |
urothelial cell | 5.05e-23 | 4 |
respiratory epithelial cell | 6.46e-20 | 13 |
epithelial cell | 1.88e-13 | 253 |
corneal epithelial cell | 1.26e-11 | 2 |
epithelial cell of tracheobronchial tree | 5.66e-10 | 9 |
epithelial cell of lower respiratory tract | 5.66e-10 | 9 |
duct epithelial cell | 2.74e-08 | 3 |
branched duct epithelial cell | 2.74e-08 | 3 |
tracheal epithelial cell | 2.74e-08 | 3 |
tracheoblast | 2.74e-08 | 3 |
endo-epithelial cell | 3.41e-07 | 42 |
epithelial cell of lung | 3.97e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
urothelium | 1.87e-18 | 5 |
transitional epithelium | 2.10e-15 | 6 |
biliary system | 7.86e-10 | 9 |
biliary tree | 7.86e-10 | 9 |
biliary bud | 7.86e-10 | 9 |
endo-epithelium | 9.56e-09 | 82 |
bile duct | 1.09e-08 | 6 |
digestive system duct | 1.09e-08 | 6 |
respiratory tract | 1.98e-08 | 54 |
endoderm-derived structure | 2.90e-08 | 160 |
endoderm | 2.90e-08 | 160 |
presumptive endoderm | 2.90e-08 | 160 |
hepatopancreatic ampulla | 3.52e-07 | 1 |
extrahepatic bile duct | 3.52e-07 | 1 |
common bile duct | 3.52e-07 | 1 |
duodenal papilla | 3.52e-07 | 1 |
respiratory tract epithelium | 3.97e-07 | 19 |
lung epithelium | 3.97e-07 | 19 |
thoracic cavity element | 4.11e-07 | 34 |
thoracic cavity | 4.11e-07 | 34 |
thoracic segment of trunk | 4.57e-07 | 52 |
thoracic segment organ | 6.96e-07 | 35 |
Ontology term | p-value | n |
---|---|---|
tubular adenocarcinoma | 5.53e-12 | 2 |
cystadenocarcinoma | 4.97e-07 | 1 |
mucinous cystadenocarcinoma | 4.97e-07 | 1 |