FFCP PHASE1:Hg19::chr15:62149711..62149734,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr15:62149711..62149734,-
|short_description=p@chr15:62149711..62149734,-
|description=CAGE_peak_at_chr15:62149711..62149734,-
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr15:62149711..62149734,- | |||
|coexpression_cluster_id=C103 | |||
|description=CAGE_peak_at_chr15:62149711..62149734,- | |||
|id=chr15:62149711..62149734,- | |||
|ontology_enrichment_celltype=CL:0000084!6.82e-18!25;CL:0000827!6.82e-18!25;CL:0000542!7.93e-18!53;CL:0000051!7.93e-18!53;CL:0000791!2.71e-17!18;CL:0000789!2.71e-17!18;CL:0002420!2.71e-17!18;CL:0002419!2.71e-17!18;CL:0000790!2.71e-17!18;CL:0000838!4.64e-17!52;CL:0000738!3.10e-16!140;CL:0002087!8.14e-15!119;CL:0002031!7.19e-13!124;CL:0000037!1.08e-12!172;CL:0000566!1.08e-12!172;CL:0000625!2.43e-12!11;CL:0002032!2.35e-11!165;CL:0000837!2.35e-11!165;CL:0000988!2.75e-11!182;CL:0000624!5.38e-08!6 | |||
|ontology_enrichment_celltype_v019=CL:0000791;9.22e-30;18!CL:0000789;9.22e-30;18!CL:0002419;9.22e-30;18!CL:0000084;8.33e-21;25!CL:0000624;5.82e-20;6!CL:0000898;1.17e-15;3!CL:0000623;1.17e-15;3!CL:0000625;6.47e-15;11!CL:0000815;3.63e-11;2!CL:0000792;3.63e-11;2!CL:0002677;3.63e-11;2!CL:0000542;4.56e-10;53!CL:0000767;2.98e-07;3!CL:0000226;5.21e-07;3!CL:0000842;5.21e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,6.72e-30,18;CL:0000789,6.72e-30,18;CL:0002420,6.72e-30,18;CL:0002419,6.72e-30,18;CL:0000790,6.72e-30,18;CL:0000084,6.67e-21,25;CL:0000827,6.67e-21,25;CL:0000624,6.86e-20,6;CL:0000838,2.00e-17,52;CL:0000542,4.95e-17,53;CL:0000051,4.95e-17,53;CL:0000898,1.06e-15,3;CL:0000623,1.12e-15,3;CL:0000825,1.12e-15,3;CL:0000625,4.41e-15,11;CL:0000738,1.17e-11,136;CL:0000815,3.14e-11,2;CL:0000792,3.14e-11,2;CL:0002677,3.14e-11,2;CL:0002087,2.19e-10,115;CL:0000037,1.57e-08,168;CL:0000988,7.36e-08,177;CL:0002031,1.55e-07,120;CL:0000767,3.38e-07,3;CL:0002032,3.51e-07,161;CL:0000837,3.51e-07,161;CL:0000226,3.95e-07,3;CL:0000842,3.95e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000790;9.22e-30;18!CL:0000051;4.56e-10;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.33e-15!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000007;1.01e-10;2!UBERON:0002106;5.21e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000007,9.67e-11,2;UBERON:0002106,8.76e-07,3;UBERON:0004854,8.76e-07,3;UBERON:0009034,8.76e-07,3;UBERON:0002095,8.76e-07,3;UBERON:0004782,8.76e-07,3;UBERON:0003281,8.76e-07,3;UBERON:0009664,8.76e-07,3;UBERON:0002296,8.76e-07,3;UBERON:0005602,8.76e-07,3;UBERON:0001179,8.76e-07,3;UBERON:0006293,8.76e-07,3 | |||
|phase1_expression=0,0,0,1.0007329835313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,1.18009283054671,3.0706351847777,0.77408061658038,0,0,0,0.0774672005803016,0,0,0,1.20326668482085,0.868043482863407,0,0,0.257575567634187,0.145398238779565,0.377875943688809,0.485168122375632,0.232429036905685,0,0,0.28769239232215,0.256160706529101,0,1.03423704220986,0,0,0,0.272906150057846,0,0,0,0,0,0.199463657621632,0,0.290209238628584,0,0,0,0,0,0.605399502633369,0.368277635987565,0.632924774881769,0,0,0.209658645508376,0,0,0,0.285012743741249,0,0.182664153764634,0,0,0.889509253863555,0.426730222566507,0,0.574752439954483,0,0,0,0,1.91136614062614,0,0.560508562981536,0,0.983548850569165,1.17903228824749,1.23360899399706,1.83905144929746,4.88883399950386,4.73447805734733,5.84480185223734,0.445641827540694,15.3195071886915,13.0704997804336,18.6854665997861,1.28091319725675,1.43065282315866,0.164437904603676,0,0,0.14828656316206,0,0,0.113309342697566,2.29932296161153,2.06176467289578,4.04831507231205,0.318565414324097,1.30216690771284,0.950452044448374,0.602300476311091,0.76791966692651,1.24930726552346,1.4206635122641,0.821127996921047,5.64498881029251,4.54648332831962,1.88271725047639,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0.132957960518865,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22452937262617,0,0,0,0,0,0,0,0,0,0,0.573673241497627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0.257640540045629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,1.18157981336281,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176096868026452,0.207328115540772,0.288239906833923,0,0.063497894292169,0,0,0,0.102827492703324,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.3346767244424,4.74380664690938,4.74869234235069,0,0,0,0.167516265334349,0.637938751653163,0,2.99161459204025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44737618286021,0.862856803274467,1.38745825144478,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082509499920588,0,0,0,0,0,0,0.137836572484531,0,0,0,0,0,0,0.127612712494584,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0.238231775457789,0.411362273086194,0,0,1.58625035258854,0,0,0,0.743212700502875,0,0,0.159426272728822,0.199579371432817,0,0.423347165447766,0.324621940274555,0,0.228234679033192,0,0,0,0,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,0,0.879049075631364,0,0.222886768554957,0,0,0,0,0.994147647766298,0.140669416410513,0,0.494411622680279,0,0,0.276283915531148,0,0,0,0,0,0,0,0.295930216910801,0,0,0,0.0927680981618513,0,0,0,0,0,0.254253650292766,0,0,0,0,0,0.120596438625408,0,0.331737779793674,0,0,0,0.139423744278603,0.0769502585037971,0.113942055847001,0,0,0,0,0,0,0,0,0.166211681900156,0,0,0,0,0,0,0,0,0.216388639742091,0,0.265372693510018,0,0,0,0.104421949505455,0.067401132980677,0.802577647298789,0,0,0,0,0.394584402849391,0,0,0.063186579628488,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0.698906672968121,0,0,0,0,0.0969890164884194,0,0,0,0,0.0633107959558787,0.391102765469606,0,0,0,0,0,0,0,0,0,0.135904206073614,0,0,0,0.600420288709789,0.136905378891993,0,0,0.262887354279314,0,0.229160424011684,0.717873024576814,0.199679000498991,0,0,0.201550417460179,0,0,0,0,0,0.0984274815147488,0,0.795229689809303,0.136203406111576,0.160753148465019,0.137539436597234,0,0.2249738915515,0,0.182248669974074,0.335434687599266,0.157611414598396,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0.129282956361551,0.26446520348538,0,0,0.427149650270779,0.314408610199332,1.65695622138878,0,0,0.487170393523584,0,0,0,0,0.327872630709804,0,0,0,0.1251909307065,0.573409195690071,0.110929051536852,0.0620964029413835,0,0,0,0.285465333544967,0,0,0,0,0,0,0,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0.521745061811734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414775308455192,0,0,0,0,0,0,0.19998739585493,0,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0.371807292777007,0,0,0.157723490002507,0,0,0,0.128458450192919,0,0.159633859057151,0.205116364240755,0,0,0,0,0,0,0,0,0.381382095467167,0,0,0.676892955143315,0,0,0,0,0,0.135075169236789,0,0,0,1.09394961803644,0,1.48863353516788,1.05522746615772,0.255524855279191,0.535701835878287,0,2.42786241694653,2.95960848756687,0,0.460935950223117,0,0,0.0657727735628491,0,0,0.235479278551542,0,0,0,0,0.47775168788705,0.0714765441766563,0.158013611732727,0.116241425368125,0,0,0,0.17071847709395,0,0,0,0,0.423387050190929,0,0,0,0.223710863595585,0.098150233615243,0,0.647428837187895,0.205325613712494,0,0.485710993059139,0,0.198950775161368,0,0,0,0.301925687133347,0,0.437119121007915,0,0,0,0,0,0.4226557275834,0,1.12780701575824,1.03132620757723,0.0999411559249289,0,0,0.160482733378337,0,0.458729283404541,0.286679166302903,0,0,0,1.0580536810308,0,0,0.432626562123789,0,0,0,0.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| ||
|short_description=p@chr15:62149711..62149734,- | |||
}} | }} |
Latest revision as of 03:07, 25 July 2015
Short description: | p@chr15:62149711..62149734, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:62149711..62149734, - |
Coexpression cluster: | C103_CD4_CD8_Natural_Peripheral_Whole_Neutrophils_Basophils |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 6.72e-30 | 18 |
alpha-beta T cell | 6.72e-30 | 18 |
immature T cell | 6.72e-30 | 18 |
mature T cell | 6.72e-30 | 18 |
immature alpha-beta T cell | 6.72e-30 | 18 |
T cell | 6.67e-21 | 25 |
pro-T cell | 6.67e-21 | 25 |
CD4-positive, alpha-beta T cell | 6.86e-20 | 6 |
lymphoid lineage restricted progenitor cell | 2.00e-17 | 52 |
lymphocyte | 4.95e-17 | 53 |
common lymphoid progenitor | 4.95e-17 | 53 |
naive T cell | 1.06e-15 | 3 |
natural killer cell | 1.12e-15 | 3 |
pro-NK cell | 1.12e-15 | 3 |
CD8-positive, alpha-beta T cell | 4.41e-15 | 11 |
leukocyte | 1.17e-11 | 136 |
regulatory T cell | 3.14e-11 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 3.14e-11 | 2 |
naive regulatory T cell | 3.14e-11 | 2 |
nongranular leukocyte | 2.19e-10 | 115 |
hematopoietic stem cell | 1.57e-08 | 168 |
hematopoietic cell | 7.36e-08 | 177 |
hematopoietic lineage restricted progenitor cell | 1.55e-07 | 120 |
basophil | 3.38e-07 | 3 |
hematopoietic oligopotent progenitor cell | 3.51e-07 | 161 |
hematopoietic multipotent progenitor cell | 3.51e-07 | 161 |
single nucleate cell | 3.95e-07 | 3 |
mononuclear cell | 3.95e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
pituitary gland | 9.67e-11 | 2 |
spleen | 8.76e-07 | 3 |
gastrointestinal system mesentery | 8.76e-07 | 3 |
stomach region | 8.76e-07 | 3 |
mesentery | 8.76e-07 | 3 |
gastrointestinal system serosa | 8.76e-07 | 3 |
mesentery of stomach | 8.76e-07 | 3 |
gut mesentery | 8.76e-07 | 3 |
dorsal mesentery | 8.76e-07 | 3 |
dorsal mesogastrium | 8.76e-07 | 3 |
peritoneal cavity | 8.76e-07 | 3 |
spleen primordium | 8.76e-07 | 3 |