FFCP PHASE1:Hg19::chr6:19154273..19154282,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:19154273..19154282,- | |||
|coexpression_cluster_id=C161 | |||
|description=CAGE_peak_at_chr6:19154273..19154282,- | |description=CAGE_peak_at_chr6:19154273..19154282,- | ||
|id=chr6:19154273..19154282,- | |id=chr6:19154273..19154282,- | ||
|ontology_enrichment_celltype=CL:0000174!2.81e-11!3;CL:0002174!6.16e-09!1;CL:0000501!6.16e-09!1;CL:0000163!4.67e-08!9 | |ontology_enrichment_celltype=CL:0000174!2.81e-11!3;CL:0002174!6.16e-09!1;CL:0000501!6.16e-09!1;CL:0000163!4.67e-08!9 | ||
|ontology_enrichment_celltype_v019=CL:0002097;4.32e-26;2!CL:0000174;6.76e-18;3!CL:0000077;1.55e-11;19!CL:0000150;7.48e-07;9!CL:0000163;7.48e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002097,4.32e-26,2;CL:0000174,6.76e-18,3;CL:0000077,1.55e-11,19;CL:0000150,7.48e-07,9;CL:0000163,7.48e-07,9 | |||
|ontology_enrichment_development_v019=UBERON:0007297;8.10e-26;2 | |||
|ontology_enrichment_disease=DOID:5662!7.75e-09!1 | |||
|ontology_enrichment_disease_v019=DOID:170;1.22e-09;6 | |||
|ontology_enrichment_disease_v019_2=DOID:170,1.22e-09,6 | |||
|ontology_enrichment_uberon=UBERON:0001301!3.87e-09!1;UBERON:0001736!5.28e-09!1;UBERON:0006298!5.28e-09!1;UBERON:0001874!1.42e-08!1;UBERON:0002372!1.91e-08!1;UBERON:0001961!1.91e-08!1;UBERON:0001744!1.91e-08!1;UBERON:0001735!1.91e-08!1;UBERON:0000078!8.74e-07!18 | |ontology_enrichment_uberon=UBERON:0001301!3.87e-09!1;UBERON:0001736!5.28e-09!1;UBERON:0006298!5.28e-09!1;UBERON:0001874!1.42e-08!1;UBERON:0002372!1.91e-08!1;UBERON:0001961!1.91e-08!1;UBERON:0001744!1.91e-08!1;UBERON:0001735!1.91e-08!1;UBERON:0000078!8.74e-07!18 | ||
|ontology_enrichment_uberon_v019=UBERON:0001301;5.12e-50;1!UBERON:0000007;8.10e-26;2!UBERON:0002369;6.76e-18;3!UBERON:0001235;6.76e-18;3!UBERON:0006858;6.76e-18;3!UBERON:0006947;1.03e-17;3!UBERON:0004054;1.03e-17;3!UBERON:0003296;1.21e-13;4!UBERON:0010133;1.21e-13;4!UBERON:0005904;1.21e-13;4!UBERON:0001894;2.26e-08;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001301,6.58e-50,1;UBERON:0000007,7.14e-26,2;UBERON:0002369,6.76e-18,3;UBERON:0001235,6.76e-18,3;UBERON:0006858,6.76e-18,3;UBERON:0006947,1.12e-17,3;UBERON:0004054,1.12e-17,3;UBERON:0003296,1.13e-13,4;UBERON:0010133,1.13e-13,4;UBERON:0005904,1.29e-13,4;UBERON:0001894,2.18e-08,7;UBERON:0006222,2.18e-08,7;UBERON:0003064,3.92e-08,28;UBERON:0005103,1.80e-07,8;UBERON:0000083,1.80e-07,8;UBERON:0009201,1.80e-07,8;UBERON:0006553,1.80e-07,8;UBERON:0003074,1.80e-07,8;UBERON:0003060,1.80e-07,8;UBERON:0000080,8.85e-07,9;UBERON:0002120,8.85e-07,9;UBERON:0004875,8.85e-07,9;UBERON:0005721,8.85e-07,9;UBERON:0005754,8.85e-07,9;UBERON:0007297,8.85e-07,9 | |||
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|short_description=p@chr6:19154273..19154282,- | |short_description=p@chr6:19154273..19154282,- | ||
}} | }} |
Latest revision as of 22:32, 30 July 2015
Short description: | p@chr6:19154273..19154282, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:19154273..19154282, - |
Coexpression cluster: | C161_mesothelioma_Mesothelial_acute_mesenchymal_extraskeletal_renal_placenta |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cortical cell of adrenal gland | 4.32e-26 | 2 |
steroid hormone secreting cell | 6.76e-18 | 3 |
mesothelial cell | 1.55e-11 | 19 |
glandular epithelial cell | 7.48e-07 | 9 |
endocrine cell | 7.48e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
epididymis | 6.58e-50 | 1 |
pituitary gland | 7.14e-26 | 2 |
adrenal gland | 6.76e-18 | 3 |
adrenal cortex | 6.76e-18 | 3 |
adrenal/interrenal gland | 6.76e-18 | 3 |
male genital duct | 1.12e-17 | 3 |
internal male genitalia | 1.12e-17 | 3 |
gland of diencephalon | 1.13e-13 | 4 |
neuroendocrine gland | 1.13e-13 | 4 |
duct of male reproductive system | 1.29e-13 | 4 |
diencephalon | 2.18e-08 | 7 |
future diencephalon | 2.18e-08 | 7 |
intermediate mesoderm | 3.92e-08 | 28 |
mesonephric epithelium | 1.80e-07 | 8 |
mesonephric tubule | 1.80e-07 | 8 |
nephric duct | 1.80e-07 | 8 |
renal duct | 1.80e-07 | 8 |
mesonephric duct | 1.80e-07 | 8 |
pronephric duct | 1.80e-07 | 8 |
mesonephros | 8.85e-07 | 9 |
pronephros | 8.85e-07 | 9 |
nephrogenic cord | 8.85e-07 | 9 |
pronephric mesoderm | 8.85e-07 | 9 |
rostral part of nephrogenic cord | 8.85e-07 | 9 |
presumptive pronephric mesoderm | 8.85e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
endocrine gland cancer | 1.22e-09 | 6 |