FFCP PHASE1:Hg19::chr6:68598272..68598298,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:68598272..68598298,- | |||
|coexpression_cluster_id=C93 | |||
|description=CAGE_peak_at_chr6:68598272..68598298,- | |description=CAGE_peak_at_chr6:68598272..68598298,- | ||
|id=chr6:68598272..68598298,- | |id=chr6:68598272..68598298,- | ||
|ontology_enrichment_celltype=CL:0000763!4.45e-20!112;CL:0000049!4.45e-20!112;CL:0002032!3.22e-15!165;CL:0000837!3.22e-15!165;CL:0000988!2.44e-14!182;CL:0000037!2.51e-14!172;CL:0000566!2.51e-14!172;CL:0000054!1.33e-09!2;CL:0000137!1.33e-09!2;CL:0000092!1.33e-09!2 | |ontology_enrichment_celltype=CL:0000763!4.45e-20!112;CL:0000049!4.45e-20!112;CL:0002032!3.22e-15!165;CL:0000837!3.22e-15!165;CL:0000988!2.44e-14!182;CL:0000037!2.51e-14!172;CL:0000566!2.51e-14!172;CL:0000054!1.33e-09!2;CL:0000137!1.33e-09!2;CL:0000092!1.33e-09!2 | ||
|ontology_enrichment_celltype_v019=CL:0000763;1.24e-14;100!CL:0000988;7.60e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,1.04e-33,108;CL:0000049,1.04e-33,108;CL:0002032,1.44e-21,161;CL:0000837,1.44e-21,161;CL:0000037,1.57e-20,168;CL:0000988,2.56e-19,177;CL:0000134,7.00e-09,354;CL:0000219,9.21e-09,386;CL:0002320,1.23e-08,361 | |||
|ontology_enrichment_development_v019=CL:0000049;7.37e-13;108 | |||
|ontology_enrichment_disease=DOID:8692!2.71e-70!31;DOID:1240!1.22e-64!39;DOID:2531!1.98e-56!51;DOID:0060083!1.98e-56!51;DOID:1036!3.80e-27!8;DOID:0050686!6.28e-25!137;DOID:14566!2.02e-16!239;DOID:162!8.99e-16!235;DOID:200!1.33e-09!2;DOID:4305!1.33e-09!2 | |||
|ontology_enrichment_disease_v019=DOID:8692;2.32e-111;31!DOID:1240;7.82e-77;39!DOID:1036;2.49e-51;8!DOID:2531;7.18e-47;51!DOID:0060083;7.18e-47;51!DOID:0050686;4.15e-10;137!DOID:0060085;1.83e-09;1!DOID:3165;1.83e-09;1!DOID:0060121;1.83e-09;1!DOID:2438;1.83e-09;1!DOID:4418;1.83e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,2.45e-115,31;DOID:1240,4.68e-91,39;DOID:2531,9.40e-76,51;DOID:0060083,9.40e-76,51;DOID:1036,2.58e-51,8;DOID:0050686,1.51e-28,137;DOID:162,7.59e-17,235;DOID:14566,2.01e-16,239;DOID:0060085,1.76e-09,1;DOID:3165,1.76e-09,1;DOID:0060121,1.76e-09,1;DOID:2438,1.76e-09,1;DOID:4418,1.76e-09,1 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0001282;2.56e-09;1!UBERON:0009842;2.56e-09;1!UBERON:0003704;2.56e-09;1!UBERON:0001171;2.56e-09;1!UBERON:0001172;2.56e-09;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001282,2.67e-09,1;UBERON:0009842,2.67e-09,1;UBERON:0003704,2.67e-09,1;UBERON:0001171,2.67e-09,1;UBERON:0001172,2.67e-09,1;UBERON:0002384,2.66e-08,371 | |||
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| ||
|short_description=p@chr6:68598272..68598298,- | |short_description=p@chr6:68598272..68598298,- | ||
}} | }} |
Latest revision as of 02:48, 31 July 2015
Short description: | p@chr6:68598272..68598298, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:68598272..68598298, - |
Coexpression cluster: | C93_chronic_acute_leukemia_acantholytic_medulloblastoma_testis_papillotubular |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 1.04e-33 | 108 |
common myeloid progenitor | 1.04e-33 | 108 |
hematopoietic oligopotent progenitor cell | 1.44e-21 | 161 |
hematopoietic multipotent progenitor cell | 1.44e-21 | 161 |
hematopoietic stem cell | 1.57e-20 | 168 |
hematopoietic cell | 2.56e-19 | 177 |
mesenchymal cell | 7.00e-09 | 354 |
motile cell | 9.21e-09 | 386 |
connective tissue cell | 1.23e-08 | 361 |
Ontology term | p-value | n |
---|---|---|
intralobular bile duct | 2.67e-09 | 1 |
acinus | 2.67e-09 | 1 |
intrahepatic bile duct | 2.67e-09 | 1 |
portal lobule | 2.67e-09 | 1 |
hepatic acinus | 2.67e-09 | 1 |
connective tissue | 2.66e-08 | 371 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 2.45e-115 | 31 |
leukemia | 4.68e-91 | 39 |
hematologic cancer | 9.40e-76 | 51 |
immune system cancer | 9.40e-76 | 51 |
chronic leukemia | 2.58e-51 | 8 |
organ system cancer | 1.51e-28 | 137 |
cancer | 7.59e-17 | 235 |
disease of cellular proliferation | 2.01e-16 | 239 |
organ system benign neoplasm | 1.76e-09 | 1 |
skin benign neoplasm | 1.76e-09 | 1 |
integumentary system benign neoplasm | 1.76e-09 | 1 |
dermis tumor | 1.76e-09 | 1 |
cutaneous fibrous histiocytoma | 1.76e-09 | 1 |