FFCP PHASE1:Hg19::chr9:101471393..101471402,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9568 | |EntrezGene=9568 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4507 | |HGNC=4507 | ||
|TSSclassifier=strong | |||
|UniProt=O75899 | |UniProt=O75899 | ||
|association_with_transcript=76bp_to_ENST00000259455,NM_005458_5end | |association_with_transcript=76bp_to_ENST00000259455,NM_005458_5end | ||
|cluster_id=chr9:101471393..101471402,- | |||
|description=CAGE_peak_9_at_GABBR2_5end | |description=CAGE_peak_9_at_GABBR2_5end | ||
|id=chr9:101471393..101471402,- | |id=chr9:101471393..101471402,- | ||
|ontology_enrichment_celltype=CL:0000071!5.89e-26!18;CL:0002546!5.89e-26!18;CL:0002139!2.44e-18!24;CL:1000413!1.07e-15!9;CL:0002543!1.06e-13!6;CL:0000115!9.14e-13!35;CL:0002544!1.25e-09!6;CL:0002078!2.91e-09!44;CL:0002620!4.94e-08!23;CL:0002618!3.30e-07!3;CL:0000213!3.37e-07!57;CL:0000215!3.37e-07!57 | |ontology_enrichment_celltype=CL:0000071!5.89e-26!18;CL:0002546!5.89e-26!18;CL:0002139!2.44e-18!24;CL:1000413!1.07e-15!9;CL:0002543!1.06e-13!6;CL:0000115!9.14e-13!35;CL:0002544!1.25e-09!6;CL:0002078!2.91e-09!44;CL:0002620!4.94e-08!23;CL:0002618!3.30e-07!3;CL:0000213!3.37e-07!57;CL:0000215!3.37e-07!57 | ||
|ontology_enrichment_celltype_v019=CL:0000071;6.62e-47;18!CL:0002139;7.88e-35;24!CL:1000413;3.28e-24;9!CL:0002543;1.19e-23;6!CL:0000115;1.17e-18;36!CL:0002544;1.28e-13;6!CL:0002078;1.61e-13;45!CL:0000076;8.81e-10;63!CL:0000213;9.20e-10;58!CL:0000215;9.20e-10;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0000071,3.41e-47,18;CL:0002546,3.41e-47,18;CL:0002139,4.81e-35,24;CL:1000413,2.19e-24,9;CL:0002543,1.10e-23,6;CL:0000115,7.08e-23,36;CL:0002078,5.32e-18,45;CL:0002544,1.18e-13,6;CL:0000213,1.27e-13,58;CL:0000215,1.27e-13,58;CL:0000076,2.02e-12,63;CL:0000222,5.33e-07,121 | |||
|ontology_enrichment_development_v019=CL:0002546;6.62e-47;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0004638;6.62e-47;18!UBERON:0001986;6.62e-47;18!UBERON:0004852;6.62e-47;18!UBERON:0000487;4.00e-38;22!UBERON:0006914;2.22e-33;25!UBERON:0003915;3.28e-24;9!UBERON:0004700;3.28e-24;9!UBERON:0001917;3.28e-24;9!UBERON:0000490;4.13e-22;33!UBERON:0001638;7.39e-16;9!UBERON:0003920;7.39e-16;9!UBERON:0004582;7.39e-16;9!UBERON:0002581;4.84e-10;1!UBERON:0002902;4.84e-10;1!UBERON:0003112;4.84e-10;1!UBERON:0011158;4.84e-10;1!UBERON:0009899;4.84e-10;1!UBERON:0007190;4.84e-10;1!UBERON:0003128;4.84e-10;1!UBERON:0001703;4.84e-10;1!UBERON:0002241;4.84e-10;1!UBERON:0007500;1.48e-08;56!UBERON:0001981;1.48e-08;56!UBERON:0004537;1.48e-08;56!UBERON:0002021;6.99e-08;5!UBERON:0000055;7.73e-08;65!UBERON:0002049;3.30e-07;75!UBERON:0007798;3.30e-07;75!UBERON:0003914;7.64e-07;74!UBERON:0001950;8.27e-07;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,3.41e-47,18;UBERON:0001986,3.41e-47,18;UBERON:0004852,3.41e-47,18;UBERON:0000487,2.33e-38,22;UBERON:0006914,1.38e-33,25;UBERON:0003915,2.19e-24,9;UBERON:0004700,2.19e-24,9;UBERON:0001917,2.19e-24,9;UBERON:0007500,3.19e-16,59;UBERON:0001981,3.19e-16,59;UBERON:0004537,3.19e-16,59;UBERON:0006965,3.19e-16,59;UBERON:0001638,7.02e-16,9;UBERON:0003920,7.02e-16,9;UBERON:0004582,7.02e-16,9;UBERON:0000055,7.67e-14,68;UBERON:0004872,3.45e-13,83;UBERON:0000025,3.54e-13,192;UBERON:0002049,7.71e-12,78;UBERON:0007798,7.71e-12,78;UBERON:0003914,1.96e-10,117;UBERON:0002902,2.16e-10,1;UBERON:0009899,2.16e-10,1;UBERON:0003112,4.44e-10,1;UBERON:0011158,4.44e-10,1;UBERON:0003128,4.44e-10,1;UBERON:0001703,4.44e-10,1;UBERON:0002241,4.44e-10,1;UBERON:0004761,4.44e-10,1;UBERON:0009617,4.44e-10,1;UBERON:0004111,6.50e-10,240;UBERON:0007190,8.24e-10,1;UBERON:0002581,9.82e-10,1;UBERON:0004535,1.45e-09,109;UBERON:0001009,2.96e-09,112;UBERON:0002021,5.49e-08,5;UBERON:0001637,4.39e-07,42;UBERON:0003509,4.39e-07,42;UBERON:0004572,4.39e-07,42;UBERON:0000483,4.46e-07,306;UBERON:0000119,5.62e-07,309;UBERON:0001950,8.82e-07,20 | |||
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|short_description=p9@GABBR2 | |short_description=p9@GABBR2 | ||
}} | }} |
Latest revision as of 19:09, 19 September 2015
Short description: | p9@GABBR2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_GABBR2_5end |
Coexpression cluster: | NA |
Association with transcript: | 76bp_to_ENST00000259455, NM_005458_5end |
EntrezGene: | GABBR2 |
HGNC: | 4507 |
UniProt: | O75899 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
blood vessel endothelial cell | 3.41e-47 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.41e-47 | 18 |
endothelial cell of vascular tree | 4.81e-35 | 24 |
endothelial cell of artery | 2.19e-24 | 9 |
vein endothelial cell | 1.10e-23 | 6 |
endothelial cell | 7.08e-23 | 36 |
meso-epithelial cell | 5.32e-18 | 45 |
aortic endothelial cell | 1.18e-13 | 6 |
lining cell | 1.27e-13 | 58 |
barrier cell | 1.27e-13 | 58 |
squamous epithelial cell | 2.02e-12 | 63 |
mesodermal cell | 5.33e-07 | 121 |