FFCP PHASE1:Hg19::chr4:85791667..85791699,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:85791667..85791699,- | |||
|coexpression_cluster_id=C4437 | |||
|description=CAGE_peak_at_chr4:85791667..85791699,- | |description=CAGE_peak_at_chr4:85791667..85791699,- | ||
|id=chr4:85791667..85791699,- | |id=chr4:85791667..85791699,- | ||
|ontology_enrichment_celltype=CL:0002139!3.53e-33!24;CL:0000213!1.68e-30!57;CL:0000215!1.68e-30!57;CL:0000115!1.93e-29!35;CL:0002078!2.57e-25!44;CL:0000071!5.88e-24!18;CL:0002546!5.88e-24!18;CL:0002321!3.33e-20!248;CL:0000220!7.78e-19!246;CL:1000413!1.81e-16!9;CL:0000222!2.49e-16!119;CL:0000076!8.21e-13!62;CL:0000066!5.56e-12!254;CL:0002543!1.53e-11!6;CL:0002544!1.61e-11!6;CL:0005020!8.10e-11!6;CL:0002138!8.10e-11!6;CL:0005022!8.10e-11!6;CL:0002322!4.41e-08!5 | |ontology_enrichment_celltype=CL:0002139!3.53e-33!24;CL:0000213!1.68e-30!57;CL:0000215!1.68e-30!57;CL:0000115!1.93e-29!35;CL:0002078!2.57e-25!44;CL:0000071!5.88e-24!18;CL:0002546!5.88e-24!18;CL:0002321!3.33e-20!248;CL:0000220!7.78e-19!246;CL:1000413!1.81e-16!9;CL:0000222!2.49e-16!119;CL:0000076!8.21e-13!62;CL:0000066!5.56e-12!254;CL:0002543!1.53e-11!6;CL:0002544!1.61e-11!6;CL:0005020!8.10e-11!6;CL:0002138!8.10e-11!6;CL:0005022!8.10e-11!6;CL:0002322!4.41e-08!5 | ||
|ontology_enrichment_celltype_v019=CL:0002139;9.23e-80;24!CL:0000071;4.31e-67;18!CL:0000115;8.85e-61;36!CL:1000413;3.39e-49;9!CL:0002078;4.26e-38;45!CL:0002543;2.14e-33;6!CL:0002544;2.90e-33;6!CL:0000213;3.40e-31;58!CL:0000215;3.40e-31;58!CL:0002618;2.57e-17;3!CL:0000076;3.83e-15;63!CL:0002138;9.29e-15;6!CL:0002545;1.61e-12;2!CL:0002188;4.46e-10;5!CL:0000540;2.28e-08;6!CL:0000404;2.28e-08;6!CL:0000039;6.90e-08;7!CL:0000586;6.90e-08;7!CL:1000746;2.49e-07;7!CL:1000612;2.49e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,8.13e-80,24;CL:0000115,1.33e-69,36;CL:0000071,3.60e-67,18;CL:0002546,3.60e-67,18;CL:0002078,5.98e-60,45;CL:0000213,6.33e-54,58;CL:0000215,6.33e-54,58;CL:1000413,2.88e-49,9;CL:0002543,2.03e-33,6;CL:0002544,2.39e-33,6;CL:0000222,2.28e-27,121;CL:0000076,1.26e-24,63;CL:0002618,2.24e-17,3;CL:0005020,9.64e-15,6;CL:0002138,9.64e-15,6;CL:0005022,9.64e-15,6;CL:0002321,1.03e-14,250;CL:0002545,1.53e-12,2;CL:0000066,2.21e-12,253;CL:0002188,4.98e-10,5;CL:0000540,1.95e-08,6;CL:0000031,1.95e-08,6;CL:0000404,1.95e-08,6;CL:0000039,7.75e-08,7;CL:0000586,7.75e-08,7;CL:1000746,2.70e-07,7;CL:1000612,2.70e-07,7 | |||
|ontology_enrichment_development_v019=CL:0002546;4.31e-67;18!CL:0005022;9.29e-15;6!UBERON:0009117;4.10e-09;10!UBERON:0005564;4.10e-09;10!CL:0000222;6.47e-09;121!CL:0000031;2.28e-08;6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001986!5.88e-24!18;UBERON:0004638!5.88e-24!18;UBERON:0004852!5.88e-24!18;UBERON:0000487!1.57e-23!22;UBERON:0002049!3.80e-20!79;UBERON:0007798!3.80e-20!79;UBERON:0006914!5.76e-20!25;UBERON:0000055!1.70e-19!69;UBERON:0003915!1.81e-16!9;UBERON:0004700!1.81e-16!9;UBERON:0001917!1.81e-16!9;UBERON:0001981!1.15e-14!60;UBERON:0007500!1.15e-14!60;UBERON:0004537!1.15e-14!60;UBERON:0006965!1.15e-14!60;UBERON:0004535!6.04e-13!110;UBERON:0001009!2.67e-12!113;UBERON:0004872!1.14e-10!84;UBERON:0003914!2.04e-10!118;UBERON:0001637!1.32e-09!42;UBERON:0003509!1.32e-09!42;UBERON:0004572!1.32e-09!42;UBERON:0001638!2.46e-09!9;UBERON:0003920!2.46e-09!9;UBERON:0004582!2.46e-09!9;UBERON:0001473!7.85e-08!8;UBERON:0004536!7.85e-08!8;UBERON:0006558!7.85e-08!8;UBERON:0000947!1.22e-07!21;UBERON:0010191!1.22e-07!21 | |ontology_enrichment_uberon=UBERON:0001986!5.88e-24!18;UBERON:0004638!5.88e-24!18;UBERON:0004852!5.88e-24!18;UBERON:0000487!1.57e-23!22;UBERON:0002049!3.80e-20!79;UBERON:0007798!3.80e-20!79;UBERON:0006914!5.76e-20!25;UBERON:0000055!1.70e-19!69;UBERON:0003915!1.81e-16!9;UBERON:0004700!1.81e-16!9;UBERON:0001917!1.81e-16!9;UBERON:0001981!1.15e-14!60;UBERON:0007500!1.15e-14!60;UBERON:0004537!1.15e-14!60;UBERON:0006965!1.15e-14!60;UBERON:0004535!6.04e-13!110;UBERON:0001009!2.67e-12!113;UBERON:0004872!1.14e-10!84;UBERON:0003914!2.04e-10!118;UBERON:0001637!1.32e-09!42;UBERON:0003509!1.32e-09!42;UBERON:0004572!1.32e-09!42;UBERON:0001638!2.46e-09!9;UBERON:0003920!2.46e-09!9;UBERON:0004582!2.46e-09!9;UBERON:0001473!7.85e-08!8;UBERON:0004536!7.85e-08!8;UBERON:0006558!7.85e-08!8;UBERON:0000947!1.22e-07!21;UBERON:0010191!1.22e-07!21 | ||
|ontology_enrichment_uberon_v019=UBERON:0004638;4.31e-67;18!UBERON:0001986;4.31e-67;18!UBERON:0004852;4.31e-67;18!UBERON:0000487;2.64e-54;22!UBERON:0003915;3.39e-49;9!UBERON:0004700;3.39e-49;9!UBERON:0001917;3.39e-49;9!UBERON:0006914;2.13e-47;25!UBERON:0000490;2.01e-32;33!UBERON:0001638;4.29e-22;9!UBERON:0003920;4.29e-22;9!UBERON:0004582;4.29e-22;9!UBERON:0000055;3.42e-15;65!UBERON:0007500;6.07e-14;56!UBERON:0001981;6.07e-14;56!UBERON:0004537;6.07e-14;56!UBERON:0005800;1.61e-12;2!UBERON:0001515;1.61e-12;2!UBERON:0002049;2.59e-11;75!UBERON:0007798;2.59e-11;75!UBERON:0001637;3.69e-11;42!UBERON:0003509;3.69e-11;42!UBERON:0004572;3.69e-11;42!UBERON:0001473;4.19e-11;8!UBERON:0004536;4.19e-11;8!UBERON:0006558;4.19e-11;8!UBERON:0002066;1.36e-10;5!UBERON:0003914;3.28e-10;74!UBERON:0000947;4.26e-09;21!UBERON:0010191;4.26e-09;21!UBERON:0002465;6.65e-09;10!UBERON:0000025;8.71e-08;93!UBERON:0004573;2.23e-07;33!UBERON:0004571;2.23e-07;33!UBERON:0000074;2.49e-07;7!UBERON:0001229;2.49e-07;7!UBERON:0001009;3.29e-07;112!UBERON:0000473;5.97e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,3.60e-67,18;UBERON:0001986,3.60e-67,18;UBERON:0004852,3.60e-67,18;UBERON:0000487,2.28e-54,22;UBERON:0003915,2.88e-49,9;UBERON:0004700,2.88e-49,9;UBERON:0001917,2.88e-49,9;UBERON:0006914,1.87e-47,25;UBERON:0000055,2.52e-28,68;UBERON:0002049,4.01e-24,78;UBERON:0007798,4.01e-24,78;UBERON:0001638,4.14e-22,9;UBERON:0003920,4.14e-22,9;UBERON:0004582,4.14e-22,9;UBERON:0007500,8.20e-21,59;UBERON:0001981,8.20e-21,59;UBERON:0004537,8.20e-21,59;UBERON:0006965,8.20e-21,59;UBERON:0004535,5.27e-16,109;UBERON:0001009,1.85e-15,112;UBERON:0004872,8.74e-14,83;UBERON:0003914,6.56e-13,117;UBERON:0005800,1.53e-12,2;UBERON:0001515,1.53e-12,2;UBERON:0001637,1.72e-11,42;UBERON:0003509,1.72e-11,42;UBERON:0004572,1.72e-11,42;UBERON:0001473,4.31e-11,8;UBERON:0004536,4.31e-11,8;UBERON:0006558,4.31e-11,8;UBERON:0002066,1.25e-10,5;UBERON:0000947,4.05e-09,21;UBERON:0010191,4.05e-09,21;UBERON:0002465,6.80e-09,10;UBERON:0004573,2.14e-07,33;UBERON:0004571,2.14e-07,33;UBERON:0010532,2.70e-07,7;UBERON:0000074,2.70e-07,7;UBERON:0001229,2.70e-07,7;UBERON:0001230,2.70e-07,7;UBERON:0003220,2.70e-07,7;UBERON:0005749,2.70e-07,7;UBERON:0004199,2.70e-07,7;UBERON:0004209,2.70e-07,7;UBERON:0004198,2.70e-07,7;UBERON:0000490,3.34e-07,148;UBERON:0004111,3.69e-07,240;UBERON:0000473,6.60e-07,8 | |||
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|short_description=p@chr4:85791667..85791699,- | |short_description=p@chr4:85791667..85791699,- | ||
}} | }} |
Latest revision as of 07:37, 30 July 2015
Short description: | p@chr4:85791667..85791699, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:85791667..85791699, - |
Coexpression cluster: | C4437_astrocytoma_Endothelial_testicular_mesothelioma_Renal_teratocarcinoma_iPS |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 8.13e-80 | 24 |
endothelial cell | 1.33e-69 | 36 |
blood vessel endothelial cell | 3.60e-67 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.60e-67 | 18 |
meso-epithelial cell | 5.98e-60 | 45 |
lining cell | 6.33e-54 | 58 |
barrier cell | 6.33e-54 | 58 |
endothelial cell of artery | 2.88e-49 | 9 |
vein endothelial cell | 2.03e-33 | 6 |
aortic endothelial cell | 2.39e-33 | 6 |
mesodermal cell | 2.28e-27 | 121 |
squamous epithelial cell | 1.26e-24 | 63 |
endothelial cell of umbilical vein | 2.24e-17 | 3 |
lymphangioblast | 9.64e-15 | 6 |
endothelial cell of lymphatic vessel | 9.64e-15 | 6 |
vascular lymphangioblast | 9.64e-15 | 6 |
embryonic cell | 1.03e-14 | 250 |
thoracic aorta endothelial cell | 1.53e-12 | 2 |
epithelial cell | 2.21e-12 | 253 |
glomerular endothelial cell | 4.98e-10 | 5 |
neuron | 1.95e-08 | 6 |
neuroblast | 1.95e-08 | 6 |
electrically signaling cell | 1.95e-08 | 6 |
germ line cell | 7.75e-08 | 7 |
germ cell | 7.75e-08 | 7 |
glomerular cell | 2.70e-07 | 7 |
kidney corpuscule cell | 2.70e-07 | 7 |