FFCP PHASE1:Hg19::chrX:55620497..55620512,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|EntrezGene= | |DHSsupport=supported | ||
|DPIdataset=robust | |||
|EntrezGene=139628 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
| | |cluster_id=chrX:55620497..55620512,+ | ||
|coexpression_cluster_id=C2959 | |||
|description=CAGE_peak_1_at_FOXR2_5end | |||
|id=chrX:55620497..55620512,+ | |id=chrX:55620497..55620512,+ | ||
|ontology_enrichment_celltype=CL:0000054!5.74e-08!2;CL:0000137!5.74e-08!2;CL:0000092!5.74e-08!2;CL:1000415!7.03e-08!2 | |ontology_enrichment_celltype=CL:0000054!5.74e-08!2;CL:0000137!5.74e-08!2;CL:0000092!5.74e-08!2;CL:1000415!7.03e-08!2 | ||
|ontology_enrichment_celltype_v019=CL:0000054;3.43e-12;2!CL:0000137;3.43e-12;2!CL:0000092;3.43e-12;2!CL:0002178;8.96e-09;3!CL:0000322;1.12e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000054,3.24e-12,2;CL:0000137,3.24e-12,2;CL:0000092,3.24e-12,2;CL:0002178,8.96e-09,3;CL:0000322,1.12e-08,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0060085!1.23e-14!1;DOID:3165!1.23e-14!1;DOID:0060121!1.23e-14!1;DOID:2438!1.23e-14!1;DOID:4418!1.23e-14!1;DOID:1325!1.65e-08!7;DOID:3904!1.65e-08!7;DOID:3910!4.69e-08!2;DOID:200!5.74e-08!2;DOID:4305!5.74e-08!2;DOID:3905!8.34e-07!9 | |||
|ontology_enrichment_disease_v019=DOID:0060085;5.73e-23;1!DOID:3165;5.73e-23;1!DOID:0060121;5.73e-23;1!DOID:2438;5.73e-23;1!DOID:4418;5.73e-23;1!DOID:3910;2.32e-12;2!DOID:200;3.43e-12;2!DOID:4305;3.43e-12;2!DOID:0060072;9.90e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:0060085,5.13e-23,1;DOID:3165,5.13e-23,1;DOID:0060121,5.13e-23,1;DOID:2438,5.13e-23,1;DOID:4418,5.13e-23,1;DOID:3910,2.32e-12,2;DOID:200,3.24e-12,2;DOID:4305,3.24e-12,2;DOID:0060072,9.63e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0004903!4.69e-08!2;UBERON:0002173!4.69e-08!2;UBERON:0002186!4.69e-08!2 | |ontology_enrichment_uberon=UBERON:0004903!4.69e-08!2;UBERON:0002173!4.69e-08!2;UBERON:0002186!4.69e-08!2 | ||
|ontology_enrichment_uberon_v019=UBERON:0004903;2.32e-12;2!UBERON:0002173;2.32e-12;2!UBERON:0002186;2.32e-12;2!UBERON:0004821;1.12e-08;3!UBERON:0007499;1.12e-08;3!UBERON:0003215;1.12e-08;3!UBERON:0010368;1.12e-08;3!UBERON:0009911;1.12e-08;3!UBERON:0002299;1.12e-08;3!UBERON:0006524;1.12e-08;3!UBERON:0008874;1.12e-08;3!UBERON:0002169;1.12e-08;3!UBERON:0004894;1.12e-08;3!UBERON:0009856;8.14e-07;4!UBERON:0000014;9.90e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004903,2.32e-12,2;UBERON:0002173,2.32e-12,2;UBERON:0002186,2.32e-12,2;UBERON:0004821,1.12e-08,3;UBERON:0003215,1.12e-08,3;UBERON:0010368,1.12e-08,3;UBERON:0009911,1.12e-08,3;UBERON:0002299,1.12e-08,3;UBERON:0006524,1.12e-08,3;UBERON:0008874,1.12e-08,3;UBERON:0002169,1.12e-08,3;UBERON:0004894,1.12e-08,3;UBERON:0000014,9.63e-07,4 | |||
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|short_description= | |short_description=p1@FOXR2 | ||
}} | }} |
Latest revision as of 02:00, 16 September 2015
Short description: | p1@FOXR2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_FOXR2_5end |
Coexpression cluster: | C2959_fibrosarcoma_gastric_teratocarcinoma_thyroid_bronchioalveolar_pagetoid_adult |
Association with transcript: | NA |
EntrezGene: | FOXR2 |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone matrix secreting cell | 3.24e-12 | 2 |
osteocyte | 3.24e-12 | 2 |
osteoclast | 3.24e-12 | 2 |
epithelial cell of stomach | 8.96e-09 | 3 |
pneumocyte | 1.12e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
bronchoalveolar duct junction | 2.32e-12 | 2 |
alveolar duct | 2.32e-12 | 2 |
bronchiole | 2.32e-12 | 2 |
pulmonary alveolus epithelium | 1.12e-08 | 3 |
alveolus | 1.12e-08 | 3 |
pulmonary lobule | 1.12e-08 | 3 |
lobule | 1.12e-08 | 3 |
alveolus of lung | 1.12e-08 | 3 |
alveolar system | 1.12e-08 | 3 |
pulmonary acinus | 1.12e-08 | 3 |
alveolar sac | 1.12e-08 | 3 |
alveolar wall | 1.12e-08 | 3 |
zone of skin | 9.63e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
organ system benign neoplasm | 5.13e-23 | 1 |
skin benign neoplasm | 5.13e-23 | 1 |
integumentary system benign neoplasm | 5.13e-23 | 1 |
dermis tumor | 5.13e-23 | 1 |
cutaneous fibrous histiocytoma | 5.13e-23 | 1 |
lung adenocarcinoma | 2.32e-12 | 2 |
giant cell tumor | 3.24e-12 | 2 |
bone giant cell tumor | 3.24e-12 | 2 |
benign neoplasm | 9.63e-07 | 4 |