FFCP PHASE1:Hg19::chr5:61213166..61213177,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:61213166..61213177,- | |||
|coexpression_cluster_id=C515 | |||
|description=CAGE_peak_at_chr5:61213166..61213177,- | |description=CAGE_peak_at_chr5:61213166..61213177,- | ||
|id=chr5:61213166..61213177,- | |id=chr5:61213166..61213177,- | ||
|ontology_enrichment_celltype=CL:0002076!1.29e-35!43;CL:0002368!1.60e-35!13;CL:0000223!9.62e-25!59;CL:0002202!1.17e-18!9;CL:0002632!1.17e-18!9;CL:0000066!3.67e-18!254;CL:0002621!1.73e-15!3;CL:0002328!4.98e-15!3;CL:0000244!7.88e-12!4;CL:0000731!7.88e-12!4;CL:0002327!8.17e-12!4;CL:0002251!4.40e-10!21;CL:0000220!1.30e-09!246;CL:0002321!1.74e-09!248;CL:0002159!4.78e-09!13;CL:0000240!9.25e-08!6;CL:0000311!9.25e-08!6;CL:0000079!9.25e-08!6;CL:0000237!9.25e-08!6;CL:0000036!9.25e-08!6;CL:0000357!9.25e-08!6;CL:0000114!9.25e-08!6;CL:0000068!1.63e-07!3;CL:0000069!1.63e-07!3;CL:0000307!1.63e-07!3;CL:0000377!1.63e-07!3;CL:0002166!2.25e-07!3;CL:0002231!3.38e-07!3 | |ontology_enrichment_celltype=CL:0002076!1.29e-35!43;CL:0002368!1.60e-35!13;CL:0000223!9.62e-25!59;CL:0002202!1.17e-18!9;CL:0002632!1.17e-18!9;CL:0000066!3.67e-18!254;CL:0002621!1.73e-15!3;CL:0002328!4.98e-15!3;CL:0000244!7.88e-12!4;CL:0000731!7.88e-12!4;CL:0002327!8.17e-12!4;CL:0002251!4.40e-10!21;CL:0000220!1.30e-09!246;CL:0002321!1.74e-09!248;CL:0002159!4.78e-09!13;CL:0000240!9.25e-08!6;CL:0000311!9.25e-08!6;CL:0000079!9.25e-08!6;CL:0000237!9.25e-08!6;CL:0000036!9.25e-08!6;CL:0000357!9.25e-08!6;CL:0000114!9.25e-08!6;CL:0000068!1.63e-07!3;CL:0000069!1.63e-07!3;CL:0000307!1.63e-07!3;CL:0000377!1.63e-07!3;CL:0002166!2.25e-07!3;CL:0002231!3.38e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002368;7.17e-39;13!CL:0002621;7.15e-20;3!CL:0000307;1.15e-19;3!CL:0002076;1.43e-17;42!CL:0000244;1.92e-15;4!CL:0000731;1.92e-15;4!CL:0002327;3.29e-15;4!CL:0002202;1.18e-14;9!CL:0002632;1.18e-14;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002368,6.94e-39,13;CL:0002076,7.23e-21,42;CL:0002621,9.53e-20,3;CL:0000068,1.69e-19,3;CL:0000069,1.69e-19,3;CL:0000307,1.69e-19,3;CL:0000377,1.69e-19,3;CL:0000244,1.79e-15,4;CL:0000731,1.79e-15,4;CL:0002327,2.76e-15,4;CL:0000223,6.18e-15,58;CL:0002202,1.21e-14,9;CL:0002632,1.21e-14,9;CL:0000066,1.15e-09,253 | |||
|ontology_enrichment_development_v019=CL:0000377;1.15e-19;3!CL:0000223;1.25e-08;58 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007196!1.20e-15!14;UBERON:0001558!1.20e-15!14;UBERON:0001949!1.73e-15!3;UBERON:0004815!4.98e-15!3;UBERON:0002031!4.98e-15!3;UBERON:0001004!2.59e-13!72;UBERON:0001911!8.17e-12!4;UBERON:0005333!8.17e-12!4;UBERON:0008425!8.17e-12!4;UBERON:0005311!8.17e-12!4;UBERON:0002185!2.15e-11!4;UBERON:0004119!1.39e-10!169;UBERON:0000925!1.39e-10!169;UBERON:0006595!1.39e-10!169;UBERON:0000076!7.34e-10!8;UBERON:0000365!1.50e-09!5;UBERON:0005153!6.35e-09!37;UBERON:0000065!8.98e-09!53;UBERON:0003729!1.24e-08!5;UBERON:0005910!5.04e-08!6;UBERON:0005178!1.21e-07!34;UBERON:0002224!1.21e-07!34;UBERON:0004807!1.65e-07!28;UBERON:0005157!1.77e-07!51;UBERON:0005181!2.17e-07!35;UBERON:0005911!4.12e-07!82 | |ontology_enrichment_uberon=UBERON:0007196!1.20e-15!14;UBERON:0001558!1.20e-15!14;UBERON:0001949!1.73e-15!3;UBERON:0004815!4.98e-15!3;UBERON:0002031!4.98e-15!3;UBERON:0001004!2.59e-13!72;UBERON:0001911!8.17e-12!4;UBERON:0005333!8.17e-12!4;UBERON:0008425!8.17e-12!4;UBERON:0005311!8.17e-12!4;UBERON:0002185!2.15e-11!4;UBERON:0004119!1.39e-10!169;UBERON:0000925!1.39e-10!169;UBERON:0006595!1.39e-10!169;UBERON:0000076!7.34e-10!8;UBERON:0000365!1.50e-09!5;UBERON:0005153!6.35e-09!37;UBERON:0000065!8.98e-09!53;UBERON:0003729!1.24e-08!5;UBERON:0005910!5.04e-08!6;UBERON:0005178!1.21e-07!34;UBERON:0002224!1.21e-07!34;UBERON:0004807!1.65e-07!28;UBERON:0005157!1.77e-07!51;UBERON:0005181!2.17e-07!35;UBERON:0005911!4.12e-07!82 | ||
|ontology_enrichment_uberon_v019=UBERON:0001949;7.15e-20;3!UBERON:0000486;2.22e-19;12!UBERON:0001911;3.29e-15;4!UBERON:0000365;1.50e-12;5!UBERON:0005910;1.30e-10;6!UBERON:0003929;4.57e-09;7!UBERON:0007196;4.94e-09;15!UBERON:0001558;4.94e-09;15!UBERON:0003126;5.59e-09;7!UBERON:0001005;5.59e-09;7!UBERON:0000065;3.06e-08;44!UBERON:0003350;4.83e-08;8!UBERON:0001828;4.83e-08;8!UBERON:0005911;1.89e-07;36 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001949,9.53e-20,3;UBERON:0001911,2.76e-15,4;UBERON:0005333,2.76e-15,4;UBERON:0008425,2.76e-15,4;UBERON:0005311,2.76e-15,4;UBERON:0000365,1.42e-12,5;UBERON:0001004,1.48e-11,74;UBERON:0005910,1.24e-10,6;UBERON:0000065,3.30e-09,54;UBERON:0007196,5.01e-09,15;UBERON:0001558,5.01e-09,15;UBERON:0003126,6.56e-09,7;UBERON:0001005,6.56e-09,7;UBERON:0000076,4.19e-08,8;UBERON:0003350,5.37e-08,8;UBERON:0001828,5.37e-08,8;UBERON:0004119,8.75e-08,160;UBERON:0000925,8.75e-08,160;UBERON:0006595,8.75e-08,160 | |||
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|short_description=p@chr5:61213166..61213177,- | |short_description=p@chr5:61213166..61213177,- | ||
}} | }} |
Latest revision as of 15:38, 30 July 2015
Short description: | p@chr5:61213166..61213177, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:61213166..61213177, - |
Coexpression cluster: | C515_Small_Urothelial_Sebocyte_Prostate_Bronchial_Mallassezderived_Esophageal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
respiratory epithelial cell | 6.94e-39 | 13 |
endo-epithelial cell | 7.23e-21 | 42 |
gingival epithelial cell | 9.53e-20 | 3 |
duct epithelial cell | 1.69e-19 | 3 |
branched duct epithelial cell | 1.69e-19 | 3 |
tracheal epithelial cell | 1.69e-19 | 3 |
tracheoblast | 1.69e-19 | 3 |
transitional epithelial cell | 1.79e-15 | 4 |
urothelial cell | 1.79e-15 | 4 |
mammary gland epithelial cell | 2.76e-15 | 4 |
endodermal cell | 6.18e-15 | 58 |
epithelial cell of tracheobronchial tree | 1.21e-14 | 9 |
epithelial cell of lower respiratory tract | 1.21e-14 | 9 |
epithelial cell | 1.15e-09 | 253 |
Ontology term | p-value | n |
---|---|---|
gingival epithelium | 9.53e-20 | 3 |
mammary gland | 2.76e-15 | 4 |
mammary bud | 2.76e-15 | 4 |
mammary ridge | 2.76e-15 | 4 |
mammary placode | 2.76e-15 | 4 |
urothelium | 1.42e-12 | 5 |
respiratory system | 1.48e-11 | 74 |
transitional epithelium | 1.24e-10 | 6 |
respiratory tract | 3.30e-09 | 54 |
tracheobronchial tree | 5.01e-09 | 15 |
lower respiratory tract | 5.01e-09 | 15 |
trachea | 6.56e-09 | 7 |
respiratory airway | 6.56e-09 | 7 |
external ectoderm | 4.19e-08 | 8 |
epithelium of mucosa | 5.37e-08 | 8 |
gingiva | 5.37e-08 | 8 |
endoderm-derived structure | 8.75e-08 | 160 |
endoderm | 8.75e-08 | 160 |
presumptive endoderm | 8.75e-08 | 160 |