FFCP PHASE1:Hg19::chr16:50609021..50609023,+: Difference between revisions
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|id=chr16:50609021..50609023,+
|short_description=p@chr16:50609021..50609023,+
|description=CAGE_peak_at_chr16:50609021..50609023,+
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr16:50609021..50609023,+ | |||
|coexpression_cluster_id=C101 | |||
|description=CAGE_peak_at_chr16:50609021..50609023,+ | |||
|id=chr16:50609021..50609023,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000182;5.93e-13;12!CL:0002253;1.51e-09;2!CL:0000322;8.86e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,6.31e-13,12;CL:0002253,1.22e-09,2;CL:0000223,3.92e-07,58;CL:0000322,8.15e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0004161;4.52e-14;11!UBERON:0001041;8.08e-14;30!UBERON:0009497;5.25e-12;13!UBERON:0003104;1.00e-08;31!UBERON:0006238;5.72e-07;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0050619;3.74e-18;1!DOID:1357;3.74e-18;1!DOID:1325;1.72e-10;7!DOID:3904;1.72e-10;7!DOID:0050615;4.98e-10;16!DOID:3910;1.51e-09;2!DOID:3905;2.33e-08;9 | |||
|ontology_enrichment_disease_v019_2=DOID:0050619,3.75e-18,1;DOID:1357,3.75e-18,1;DOID:1325,1.61e-10,7;DOID:3904,1.61e-10,7;DOID:0050615,4.76e-10,16;DOID:3910,1.33e-09,2;DOID:3905,2.20e-08,9;DOID:305,2.93e-07,106 | |||
|ontology_enrichment_uberon=UBERON:0007023!7.40e-14!115;UBERON:0001049!1.41e-11!57;UBERON:0005068!1.41e-11!57;UBERON:0006241!1.41e-11!57;UBERON:0007135!1.41e-11!57;UBERON:0005743!4.45e-09!86;UBERON:0001017!6.36e-09!82;UBERON:0002780!1.14e-07!41;UBERON:0001890!1.14e-07!41;UBERON:0006240!1.14e-07!41;UBERON:0000073!1.24e-07!94;UBERON:0001016!1.24e-07!94;UBERON:0002616!1.27e-07!59;UBERON:0000955!1.43e-07!69;UBERON:0006238!1.43e-07!69;UBERON:0003080!2.09e-07!42;UBERON:0003075!2.30e-07!86;UBERON:0007284!2.30e-07!86;UBERON:0001893!2.91e-07!34;UBERON:0002240!2.94e-07!3;UBERON:0002346!8.65e-07!90 | |||
|ontology_enrichment_uberon_v019=UBERON:0001764;3.74e-18;1!UBERON:0001825;3.74e-18;1!UBERON:0004903;1.51e-09;2!UBERON:0002173;1.51e-09;2!UBERON:0002186;1.51e-09;2!UBERON:0002107;2.11e-08;19!UBERON:0006925;2.11e-08;19!UBERON:0004821;8.86e-07;3!UBERON:0007499;8.86e-07;3!UBERON:0003215;8.86e-07;3!UBERON:0010368;8.86e-07;3!UBERON:0009911;8.86e-07;3!UBERON:0002299;8.86e-07;3!UBERON:0002114;8.86e-07;2!UBERON:0006524;8.86e-07;3!UBERON:0008874;8.86e-07;3!UBERON:0002169;8.86e-07;3!UBERON:0004894;8.86e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001764,3.75e-18,1;UBERON:0001825,3.75e-18,1;UBERON:0007499,7.69e-11,25;UBERON:0009856,1.95e-10,26;UBERON:0004903,1.33e-09,2;UBERON:0002173,1.33e-09,2;UBERON:0002186,1.33e-09,2;UBERON:0002107,2.20e-08,19;UBERON:0006925,2.20e-08,19;UBERON:0008836,2.20e-08,19;UBERON:0008835,2.58e-07,22;UBERON:0003894,2.58e-07,22;UBERON:0005911,4.70e-07,82;UBERON:0009854,5.09e-07,23;UBERON:0004821,8.15e-07,3;UBERON:0003215,8.15e-07,3;UBERON:0010368,8.15e-07,3;UBERON:0009911,8.15e-07,3;UBERON:0002299,8.15e-07,3;UBERON:0006524,8.15e-07,3;UBERON:0008874,8.15e-07,3;UBERON:0002169,8.15e-07,3;UBERON:0004894,8.15e-07,3 | |||
|phase1_expression=0.181678379270557,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0,0,0,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242584061187816,0,0.411167888021826,0,0,0,0,0,0,0,0,0,0,0,0,0,0.659702600373432,0,0,0,0.56738522469114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0.786021525498329,0.616804496998528,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07016331235885,0,0,0,0.68725489096526,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0.486634870302636,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0.621984346622316,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215627574859517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0.426910231213777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.362578348774867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.41254749960294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223676107892416,0,0,0,0,0,0,0,0,0.439524537815682,0,0,1.42068073403207,0,0,0,0,0,0,0,0.211125408127993,0.597743964753209,0,0,0,0,0,0,0,0,0,0,0,1.93866549219044,0,3.99227596002388,0,0.262379999988587,0,0,0,0,0,0,0,0,0.241192877250816,0,0,0,0,0,0.139423744278603,0.461701551022782,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.51472047819464,0,0.0884575645033392,0,0,0,0.104421949505455,0.134802265961354,0,0.234264445725339,0,0,0,0.394584402849391,0,0,0.252746318513952,0,0.207376382794494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126621591911757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.273810757783986,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,1.18174773460835,1.2362378757175,1.41547442093788,0,0,0,0.272406812223151,0,0,0,0,0.77380195455795,0.121499113316049,0,0.0788057072991982,0.262272940674991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,5.0257310800075,0,0,0,0,0.221858103073705,0.434674820589684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0.159633859057151,0.205116364240755,0,0.0691572524642179,0,0,0,0,0,0,0,0,0.397832444232549,0,0,0,0,0.163771917510097,0,0.0675375846183947,0,0,0.126831620387814,0,0,0,0,0,0,0,0,0,0,0,0,0.271878931907327,0,0,0,0.078493092850514,0,0,0.913158720509496,0,0,0.214429632529969,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0.971421986118279,0,13.7276034861344,0,6.55087275825968,0.109940516745429,0,0.0771741581079447,0.218559560503957,0,0,0,0.392616934229891,0.594092800654172,0.4226557275834,0,0,0.257831551894309,0,0,0,0,0,0,0.573358332605805,0.157771562193185,0,0.436350690340377,1.0580536810308,0,0,0,0,0,0,0,0,0,0.250707539292375,0,0,0,0.413731983447581,0,0.23806443146374,0.0645889098360061,0,0,0,0,0,0,0.134704106029175,0.215166616178029,0.665320713092027,0,0,0,0.0898252021065869,0,0.488965776731466,0.406896178315738,0,0,0 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|phase1_expression=0.181678379270557,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0,0,0,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242584061187816,0,0.411167888021826,0,0,0,0,0,0,0,0,0,0,0,0,0,0.659702600373432,0,0,0,0.56738522469114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0.786021525498329,0.616804496998528,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07016331235885,0,0,0,0.68725489096526,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0.486634870302636,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0.621984346622316,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215627574859517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0.426910231213777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.362578348774867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.41254749960294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223676107892416,0,0,0,0,0,0,0,0,0.439524537815682,0,0,1.42068073403207,0,0,0,0,0,0,0,0.211125408127993,0.597743964753209,0,0,0,0,0,0,0,0,0,0,0,1.93866549219044,0,3.99227596002388,0,0.262379999988587,0,0,0,0,0,0,0,0,0.241192877250816,0,0,0,0,0,0.139423744278603,0.461701551022782,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.51472047819464,0,0.0884575645033392,0,0,0,0.104421949505455,0.134802265961354,0,0.234264445725339,0,0,0,0.394584402849391,0,0,0.252746318513952,0,0.207376382794494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126621591911757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.273810757783986,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,1.18174773460835,1.2362378757175,1.41547442093788,0,0,0,0.272406812223151,0,0,0,0,0.77380195455795,0.121499113316049,0,0.0788057072991982,0.262272940674991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,5.0257310800075,0,0,0,0,0.221858103073705,0.434674820589684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0.159633859057151,0.205116364240755,0,0.0691572524642179,0,0,0,0,0,0,0,0,0.397832444232549,0,0,0,0,0.163771917510097,0,0.0675375846183947,0,0,0.126831620387814,0,0,0,0,0,0,0,0,0,0,0,0,0.271878931907327,0,0,0,0.078493092850514,0,0,0.913158720509496,0,0,0.214429632529969,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0.971421986118279,0,13.7276034861344,0,6.55087275825968,0.109940516745429,0,0.0771741581079447,0.218559560503957,0,0,0,0.392616934229891,0.594092800654172,0.4226557275834,0,0,0.257831551894309,0,0,0,0,0,0,0.573358332605805,0.157771562193185,0,0.436350690340377,1.0580536810308,0,0,0,0,0,0,0,0,0,0.250707539292375,0,0,0,0.413731983447581,0,0.23806443146374,0.0645889098360061,0,0,0,0,0,0,0.134704106029175,0.215166616178029,0.665320713092027,0,0,0,0.0898252021065869,0,0.488965776731466,0.406896178315738,0,0,0 | ||
|short_description=p@chr16:50609021..50609023,+ | |||
}} | }} |
Latest revision as of 09:31, 25 July 2015
Short description: | p@chr16:50609021..50609023, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:50609021..50609023, + |
Coexpression cluster: | C101_small_cerebellum_maxillary_colon_parietal_epididymis_merkel |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 6.31e-13 | 12 |
epithelial cell of large intestine | 1.22e-09 | 2 |
endodermal cell | 3.92e-07 | 58 |
pneumocyte | 8.15e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
maxillary sinus | 3.75e-18 | 1 |
paranasal sinus | 3.75e-18 | 1 |
epithelial sac | 7.69e-11 | 25 |
sac | 1.95e-10 | 26 |
bronchoalveolar duct junction | 1.33e-09 | 2 |
alveolar duct | 1.33e-09 | 2 |
bronchiole | 1.33e-09 | 2 |
liver | 2.20e-08 | 19 |
digestive gland | 2.20e-08 | 19 |
liver bud | 2.20e-08 | 19 |
hepatic diverticulum | 2.58e-07 | 22 |
liver primordium | 2.58e-07 | 22 |
endo-epithelium | 4.70e-07 | 82 |
digestive tract diverticulum | 5.09e-07 | 23 |
pulmonary alveolus epithelium | 8.15e-07 | 3 |
alveolus | 8.15e-07 | 3 |
pulmonary lobule | 8.15e-07 | 3 |
lobule | 8.15e-07 | 3 |
alveolus of lung | 8.15e-07 | 3 |
alveolar system | 8.15e-07 | 3 |
pulmonary acinus | 8.15e-07 | 3 |
alveolar sac | 8.15e-07 | 3 |
alveolar wall | 8.15e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
paranasal sinus cancer | 3.75e-18 | 1 |
maxillary sinus cancer | 3.75e-18 | 1 |
bronchus cancer | 1.61e-10 | 7 |
bronchogenic carcinoma | 1.61e-10 | 7 |
respiratory system cancer | 4.76e-10 | 16 |
lung adenocarcinoma | 1.33e-09 | 2 |
lung carcinoma | 2.20e-08 | 9 |
carcinoma | 2.93e-07 | 106 |