FFCP PHASE1:Hg19::chr16:50727479..50727546,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr16:50727479..50727546,+
|short_description=p1@NOD2
|description=CAGE_peak_1_at_NOD2_5end
|association_with_transcript=0bp_to_ENST00000526417,ENST00000531674,...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=64127 | |EntrezGene=64127 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5331 | |HGNC=5331 | ||
|TSSclassifier=strong | |||
|UniProt=E9PK30,Q9HC29 | |UniProt=E9PK30,Q9HC29 | ||
|association_with_transcript=0bp_to_ENST00000526417,ENST00000531674,uc010cbj.1,uc010cbk.1_5end | |||
|cluster_id=chr16:50727479..50727546,+ | |||
|coexpression_cluster_id=C26 | |||
|description=CAGE_peak_1_at_NOD2_5end | |||
|id=chr16:50727479..50727546,+ | |||
|ontology_enrichment_celltype=CL:0000738!4.30e-47!140;CL:0000766!5.44e-40!76;CL:0000037!8.66e-38!172;CL:0000566!8.66e-38!172;CL:0002031!1.96e-36!124;CL:0002087!2.03e-36!119;CL:0000557!4.33e-36!71;CL:0002032!2.36e-35!165;CL:0000837!2.36e-35!165;CL:0000988!9.79e-34!182;CL:0002009!1.02e-33!65;CL:0002057!1.54e-33!42;CL:0000839!2.02e-32!70;CL:0002194!2.70e-32!63;CL:0000576!2.70e-32!63;CL:0000040!2.70e-32!63;CL:0000559!2.70e-32!63;CL:0000860!1.25e-29!45;CL:0000763!1.65e-29!112;CL:0000049!1.65e-29!112;CL:0002393!1.10e-07!9;CL:0002397!1.10e-07!9;CL:0000791!6.20e-07!18;CL:0000789!6.20e-07!18;CL:0002420!6.20e-07!18;CL:0002419!6.20e-07!18;CL:0000790!6.20e-07!18;CL:0000094!7.52e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000860;9.06e-37;33!CL:0002057;9.06e-37;33!CL:0000473;2.02e-34;39!CL:0000234;2.02e-34;39!CL:0000576;7.57e-32;48!CL:0000766;3.67e-27;69!CL:0002087;5.26e-16;104!CL:0000738;2.92e-14;136!CL:0000763;1.25e-13;100!CL:0000094;1.40e-09;8!CL:0000988;2.99e-09;177!CL:0002393;6.02e-08;6!CL:0002397;6.02e-08;6!CL:0000219;2.10e-07;193 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,3.12e-67,136;CL:0000766,5.45e-61,72;CL:0000037,3.39e-56,168;CL:0000557,5.19e-55,67;CL:0000473,2.52e-54,48;CL:0000234,2.52e-54,48;CL:0002031,2.12e-53,120;CL:0002032,6.17e-53,161;CL:0000837,6.17e-53,161;CL:0002009,1.11e-52,61;CL:0002087,1.17e-52,115;CL:0000988,2.01e-51,177;CL:0002194,1.71e-50,59;CL:0000576,1.71e-50,59;CL:0000040,1.71e-50,59;CL:0000559,1.71e-50,59;CL:0000839,4.59e-50,66;CL:0000860,5.28e-50,42;CL:0002057,5.28e-50,42;CL:0000763,4.61e-47,108;CL:0000049,4.61e-47,108;CL:0000134,5.38e-13,354;CL:0002320,3.91e-12,361;CL:0002393,8.05e-11,9;CL:0002397,8.05e-11,9;CL:0000094,1.46e-09,8;CL:0000219,3.37e-09,386;CL:0000838,1.50e-07,52;CL:0000542,2.84e-07,53;CL:0000051,2.84e-07,53 | |||
|ontology_enrichment_development_v019=CL:0002057;6.33e-36;42!CL:0000049;1.11e-12;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.53e-36!102;UBERON:0003061!1.53e-36!102;UBERON:0002193!1.99e-35!112;UBERON:0002371!4.51e-29!80;UBERON:0001474!1.20e-25!86;UBERON:0002405!1.58e-24!115;UBERON:0004765!4.14e-21!101;UBERON:0001434!4.14e-21!101;UBERON:0003081!4.23e-10!216;UBERON:0007023!5.10e-09!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.39e-10;15!UBERON:0000179;3.39e-10;15!UBERON:0000463;3.39e-10;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.70e-57,98;UBERON:0003061,1.70e-57,98;UBERON:0002193,4.10e-55,108;UBERON:0002371,1.01e-45,76;UBERON:0002405,3.93e-45,93;UBERON:0001474,1.11e-40,82;UBERON:0004765,4.86e-35,90;UBERON:0001434,2.64e-29,100;UBERON:0003081,4.20e-24,203;UBERON:0002384,9.89e-12,371;UBERON:0000178,3.51e-10,15;UBERON:0000179,3.51e-10,15;UBERON:0000463,3.51e-10,15;UBERON:0002204,4.03e-10,167;UBERON:0000926,9.86e-09,315;UBERON:0004120,9.86e-09,315;UBERON:0006603,9.86e-09,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,4.36882744260345,4.22027165165526,0,0,0,0,0,0,0,0.204000691244253,0,0,0,0,10.6978768047132,9.35946719729382,9.91755844552359,28.71559220997,10.3633937486247,24.7705797305722,0,0.30120591877825,0,0,0,0.293600439334847,40.9956602313589,46.1252229181326,39.9300002117167,4.25439401055856,3.2389366601898,5.92423805558629,59.467879660842,52.9026321164333,50.7000687882536,60.1991205585723,50.9848181147064,50.791844826797,80.5538698502021,82.4837475023704,70.9446689665756,36.8877878388182,21.3009945582663,50.1078000399065,86.5914761895982,59.7664468626682,37.9782688712193,75.9088053079838,44.9300637906531,60.0976898251099,110.170334262363,88.1629366687613,104.42506388051,72.8425188957746,48.2277440987469,46.7116686746681,87.6857841746034,80.8298523551312,76.4504733362011,60.5399502633369,50.8223137662839,50.9504443779824,18.167954622827,21.8982428963995,19.498254032279,40.5506358438847,26.5813100329466,22.6623077242883,17.3857773682162,10.3436672143527,13.8824756861122,0,2.18455444504853,0.889509253863555,1.70692089026603,0,2.87376219977242,1.32208974556972,0,0,1.76171156811282,0.382273228125229,0,8.40762844472304,0.790152254325231,3.14735632182133,1.96505381374582,2.2616164889946,0.501559486172034,0.651844533267181,0.946895611469467,0,0.445641827540694,3.24066498222321,2.43687284041983,0.812411591295047,0.896639238079726,0.390178042679635,2.30213066445147,4.14525026678773,2.60822777161547,0.444859689486181,0,0,1.24640276967323,2.68254345521345,3.77990190030893,2.27717722817553,2.54852331459277,0.651083453856419,0.950452044448374,2.40920190524436,1.53583933385302,4.99722906209383,4.02521328474829,4.10563998460523,0.403213486449465,2.13952156626806,1.44824403882799,0,0,0,0,0,0,0,7.78615792484217,0,0,0,1.44076983047484,0.728590576585084,1.48313777113772,0,0.174129737299267,1.19662164466979,4.05434061319081,2.85997455390064,2.97166001063652,0,0,0.347140501607594,0,0,0,0,0.258416759169329,0,0.33472061276467,0,0,0.24406205754817,0,0,0,0.44905874525234,0.450445921933289,0,0,0,13.1780417436063,38.7780264148325,1.3082821564276,0,0,0.132409180813219,0,0.709336764396714,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.494533858557114,0,0,0,0,0,0,0,0.150238058906597,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0,0,0.57978255948989,1.36373060295417,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.73150970389327,1.1240175325762,0.603173834469785,0.0925884451585296,0,0,0,0,0,1.15493158208859,0,1.14152491340759,0,0,6.89407617044712,1.17002132569619,8.9178697373237,0.93733833986777,0.335964256397719,0.425325291727159,0.179117045405697,0.871901815541886,0,1.97065295158377,9.33313400540196,1.65862492432618,0.432359860250884,3.91351543621778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0.355391948742546,0,0.602878754119172,0,0,3.64871341923571,4.01805673145701,2.10833939483032,0,0,0,0,0,0.358121926479791,0,3.74358444383662,3.66566877261179,4.36366323351144,0,0,0,0,0,40.4463792931478,8.97484377612075,9.11714129559278,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0.184369168541703,0,0.195801157462741,0,10.3384013061444,15.0999940573032,18.5705950577993,5.45629628603267,1.66435439510497,13.3051729065059,0,0,0,0,0,0,0,0,0.177561725313127,0,0,0,0,0,1.01289087829486,0.114814448164607,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,1.64865618636356,0,0,3.44559322797703,3.25030123018261,0,0.48335359146061,0,0.15350367472613,0.275673144969061,0.107420244868274,0.145016693914229,0,0.0890320356467374,0.495854746082934,0.384380134730212,0.382838137483752,2.023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487426979262569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0.987884678879706,0,0,0.577332676353072,0,0,1.41215701165169,1.72202149068492,1.68471475667626,2.21715076768338,0.459446800413919,25.3723804616085,35.1733115285493,29.6216537330565,16.4379925065874,17.2772154696202,34.369085493214,22.1412889267627,37.2768832858307,0,0,0.245040215981032,0.557409525377156,0,0,0,0,2.8725805519855,0,0,0,0,0,0,0.50787533340481,3.37234957717769,4.03599414382095,2.55507742614196,0,0.921722292925374,2.01308497103174,0.667396566847634,1.75849285861836,0,0,0,0,0,0.18714054040822,1.17206543417515,0,0,0,4.05865624054073,3.26661148915902,6.45037474408387,0,0.281338832821026,0,5.10892010102955,0,1.9924798825107,0.828851746593443,0,0,2.46169610922139,0,0,0,2.55786185113436,1.7755813014648,14.3689855408164,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0.241192877250816,0,0.110579259931225,0.295547618953547,0,0,0.139423744278603,1.38510465306835,0,0.46112780877612,0,0,1.5950057986596,0.183195186803725,0.533034776018635,0,0,0.498635045700469,0,0,0,0,0,0,0,0.141353071433941,0.216388639742091,0,0.442287822516696,0.611030144933625,0,0,0,0.337005664903385,0,0,0,0,0,0,0,0,5.56041900730694,0,0.103688191397247,0,0,0,0,0,0,0,0.783939179315021,0,1.22308667769421,0,0,0,0,5.33439590686307,0,0,0,0.19871461170299,0.126621591911757,0,0,1.2807179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| ||
|short_description=p1@NOD2 | |||
}} | }} |
Latest revision as of 21:07, 16 September 2015
Short description: | p1@NOD2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_NOD2_5end |
Coexpression cluster: | C26_Eosinophils_Neutrophils_CD14_CD14CD16_Basophils_Monocytederived_Whole |
Association with transcript: | 0bp_to_ENST00000526417, ENST00000531674, uc010cbj.1, uc010cbk.1_5end |
EntrezGene: | NOD2 |
HGNC: | 5331 |
UniProt: | E9PK30Q9HC29 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.70e-57 | 98 |
blood island | 1.70e-57 | 98 |
hemolymphoid system | 4.10e-55 | 108 |
bone marrow | 1.01e-45 | 76 |
immune system | 3.93e-45 | 93 |
bone element | 1.11e-40 | 82 |
skeletal element | 4.86e-35 | 90 |
skeletal system | 2.64e-29 | 100 |
lateral plate mesoderm | 4.20e-24 | 203 |
connective tissue | 9.89e-12 | 371 |
blood | 3.51e-10 | 15 |
haemolymphatic fluid | 3.51e-10 | 15 |
organism substance | 3.51e-10 | 15 |
musculoskeletal system | 4.03e-10 | 167 |
mesoderm | 9.86e-09 | 315 |
mesoderm-derived structure | 9.86e-09 | 315 |
presumptive mesoderm | 9.86e-09 | 315 |