FFCP PHASE1:Hg19::chr7:127292209..127292226,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=27044 | |EntrezGene=27044 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30646 | |HGNC=30646 | ||
|TSSclassifier=strong | |||
|UniProt=Q7KZF4 | |UniProt=Q7KZF4 | ||
|association_with_transcript=-7bp_to_,7bp_to_ENST00000354725,NM_014390,uc003vmi.2_5end | |association_with_transcript=-7bp_to_,7bp_to_ENST00000354725,NM_014390,uc003vmi.2_5end | ||
|cluster_id=chr7:127292209..127292226,+ | |||
|description=CAGE_peak_2_at_SND1_5end | |description=CAGE_peak_2_at_SND1_5end | ||
|id=chr7:127292209..127292226,+ | |id=chr7:127292209..127292226,+ | ||
|ontology_enrichment_celltype=CL:0000183!3.72e-07!59 | |ontology_enrichment_celltype=CL:0000183!3.72e-07!59 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,6.82e-07,121;CL:0002321,7.30e-07,250 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003914!3.04e-11!118;UBERON:0000119!3.92e-11!312;UBERON:0000483!6.44e-11!309;UBERON:0000025!3.08e-09!194;UBERON:0005256!5.40e-09!143;UBERON:0003104!5.68e-09!238;UBERON:0009142!5.68e-09!238;UBERON:0000481!9.93e-09!347;UBERON:0001981!1.25e-08!60;UBERON:0007500!1.25e-08!60;UBERON:0004537!1.25e-08!60;UBERON:0006965!1.25e-08!60;UBERON:0002100!1.92e-08!216;UBERON:0000055!2.14e-08!69;UBERON:0002049!4.89e-08!79;UBERON:0007798!4.89e-08!79;UBERON:0004290!6.44e-08!70;UBERON:0000475!8.19e-08!365;UBERON:0004111!1.66e-07!241;UBERON:0001637!2.40e-07!42;UBERON:0003509!2.40e-07!42;UBERON:0004572!2.40e-07!42;UBERON:0000477!2.72e-07!286;UBERON:0000914!4.78e-07!83;UBERON:0002329!4.78e-07!83;UBERON:0003077!4.78e-07!83;UBERON:0003059!4.78e-07!83;UBERON:0007282!4.78e-07!83;UBERON:0009618!4.78e-07!83;UBERON:0007285!4.78e-07!83;UBERON:0004872!5.37e-07!84;UBERON:0000486!6.73e-07!82 | |ontology_enrichment_uberon=UBERON:0003914!3.04e-11!118;UBERON:0000119!3.92e-11!312;UBERON:0000483!6.44e-11!309;UBERON:0000025!3.08e-09!194;UBERON:0005256!5.40e-09!143;UBERON:0003104!5.68e-09!238;UBERON:0009142!5.68e-09!238;UBERON:0000481!9.93e-09!347;UBERON:0001981!1.25e-08!60;UBERON:0007500!1.25e-08!60;UBERON:0004537!1.25e-08!60;UBERON:0006965!1.25e-08!60;UBERON:0002100!1.92e-08!216;UBERON:0000055!2.14e-08!69;UBERON:0002049!4.89e-08!79;UBERON:0007798!4.89e-08!79;UBERON:0004290!6.44e-08!70;UBERON:0000475!8.19e-08!365;UBERON:0004111!1.66e-07!241;UBERON:0001637!2.40e-07!42;UBERON:0003509!2.40e-07!42;UBERON:0004572!2.40e-07!42;UBERON:0000477!2.72e-07!286;UBERON:0000914!4.78e-07!83;UBERON:0002329!4.78e-07!83;UBERON:0003077!4.78e-07!83;UBERON:0003059!4.78e-07!83;UBERON:0007282!4.78e-07!83;UBERON:0009618!4.78e-07!83;UBERON:0007285!4.78e-07!83;UBERON:0004872!5.37e-07!84;UBERON:0000486!6.73e-07!82 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000119,4.81e-11,309;UBERON:0003914,6.87e-11,117;UBERON:0000483,7.87e-11,306;UBERON:0003104,2.75e-10,160;UBERON:0009142,2.75e-10,160;UBERON:0007503,2.91e-10,78;UBERON:0005256,3.64e-10,122;UBERON:0000025,1.11e-08,192;UBERON:0002100,1.19e-08,199;UBERON:0002329,2.83e-08,71;UBERON:0003059,2.83e-08,71;UBERON:0007282,2.83e-08,71;UBERON:0004290,2.83e-08,71;UBERON:0009618,2.83e-08,71;UBERON:0007500,3.13e-08,59;UBERON:0001981,3.13e-08,59;UBERON:0004537,3.13e-08,59;UBERON:0006965,3.13e-08,59;UBERON:0000490,3.55e-08,148;UBERON:0007524,4.03e-08,73;UBERON:0003077,4.10e-08,72;UBERON:0007285,4.10e-08,72;UBERON:0000055,5.09e-08,68;UBERON:0002049,1.10e-07,78;UBERON:0007798,1.10e-07,78;UBERON:0001637,2.40e-07,42;UBERON:0003509,2.40e-07,42;UBERON:0004572,2.40e-07,42;UBERON:0000486,3.23e-07,83;UBERON:0004111,4.53e-07,240 | |||
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| ||
|short_description=p2@SND1 | |short_description=p2@SND1 | ||
}} | }} |
Latest revision as of 02:40, 16 September 2015
Short description: | p2@SND1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SND1_5end |
Coexpression cluster: | NA |
Association with transcript: | -7bp_to_, 7bp_to_ENST00000354725, NM_014390, uc003vmi.2_5end |
EntrezGene: | SND1 |
HGNC: | 30646 |
UniProt: | Q7KZF4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 6.82e-07 | 121 |
embryonic cell | 7.30e-07 | 250 |
Ontology term | p-value | n |
---|---|---|
cell layer | 4.81e-11 | 309 |
epithelial tube | 6.87e-11 | 117 |
epithelium | 7.87e-11 | 306 |
mesenchyme | 2.75e-10 | 160 |
entire embryonic mesenchyme | 2.75e-10 | 160 |
epithelial vesicle | 2.91e-10 | 78 |
trunk mesenchyme | 3.64e-10 | 122 |
tube | 1.11e-08 | 192 |
trunk | 1.19e-08 | 199 |
somite | 2.83e-08 | 71 |
presomitic mesoderm | 2.83e-08 | 71 |
presumptive segmental plate | 2.83e-08 | 71 |
dermomyotome | 2.83e-08 | 71 |
trunk paraxial mesoderm | 2.83e-08 | 71 |
epithelial tube open at both ends | 3.13e-08 | 59 |
blood vessel | 3.13e-08 | 59 |
blood vasculature | 3.13e-08 | 59 |
vascular cord | 3.13e-08 | 59 |
unilaminar epithelium | 3.55e-08 | 148 |
dense mesenchyme tissue | 4.03e-08 | 73 |
paraxial mesoderm | 4.10e-08 | 72 |
presumptive paraxial mesoderm | 4.10e-08 | 72 |
vessel | 5.09e-08 | 68 |
vasculature | 1.10e-07 | 78 |
vascular system | 1.10e-07 | 78 |
artery | 2.40e-07 | 42 |
arterial blood vessel | 2.40e-07 | 42 |
arterial system | 2.40e-07 | 42 |
multilaminar epithelium | 3.23e-07 | 83 |
anatomical conduit | 4.53e-07 | 240 |