FFCP PHASE1:Hg19::chr16:66638038..66638062,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr16:66638038..66638062,+
|short_description=p3@CMTM3
|description=CAGE_peak_3_at_CMTM3_5end
|association_with_transcript=35bp_to_ENST00000360086_5end
|Entrez...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=123920 | |EntrezGene=123920 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19174 | |HGNC=19174 | ||
|TSSclassifier=strong | |||
|UniProt=Q96MX0 | |UniProt=Q96MX0 | ||
|association_with_transcript=35bp_to_ENST00000360086_5end | |||
|cluster_id=chr16:66638038..66638062,+ | |||
|coexpression_cluster_id=C18 | |||
|description=CAGE_peak_3_at_CMTM3_5end | |||
|id=chr16:66638038..66638062,+ | |||
|ontology_enrichment_celltype=CL:0000084!2.00e-13!25;CL:0000827!2.00e-13!25;CL:0000791!4.76e-12!18;CL:0000789!4.76e-12!18;CL:0002420!4.76e-12!18;CL:0002419!4.76e-12!18;CL:0000790!4.76e-12!18;CL:0000625!7.74e-08!11;CL:0002320!2.28e-07!365;CL:0000134!3.25e-07!358 | |||
|ontology_enrichment_celltype_v019=CL:0000084;8.60e-22;25!CL:0000791;2.77e-20;18!CL:0000789;2.77e-20;18!CL:0002419;2.77e-20;18!CL:0000625;5.21e-12;11!CL:0000624;1.10e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000084,1.14e-21,25;CL:0000827,1.14e-21,25;CL:0000791,3.22e-20,18;CL:0000789,3.22e-20,18;CL:0002420,3.22e-20,18;CL:0002419,3.22e-20,18;CL:0000790,3.22e-20,18;CL:0000037,7.16e-13,168;CL:0000988,1.65e-12,177;CL:0000625,4.97e-12,11;CL:0002032,1.13e-09,161;CL:0000837,1.13e-09,161;CL:0000838,1.50e-09,52;CL:0000542,3.16e-09,53;CL:0000051,3.16e-09,53;CL:0000624,1.34e-08,6;CL:0000134,2.12e-08,354;CL:0000738,2.32e-08,136;CL:0002320,8.66e-08,361;CL:0002087,1.42e-07,115;CL:0002031,7.64e-07,120 | |||
|ontology_enrichment_development_v019=CL:0000790;2.77e-20;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:1240,2.14e-07,39 | |||
|ontology_enrichment_uberon=UBERON:0002384!3.21e-07!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.93e-08;15!UBERON:0000179;1.93e-08;15!UBERON:0000463;1.93e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,7.38e-09,15;UBERON:0000179,7.38e-09,15;UBERON:0000463,7.38e-09,15;UBERON:0002384,2.72e-07,371 | |||
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| ||
|short_description=p3@CMTM3 | |||
}} | }} |
Latest revision as of 08:45, 17 September 2015
Short description: | p3@CMTM3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CMTM3_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | 35bp_to_ENST00000360086_5end |
EntrezGene: | CMTM3 |
HGNC: | 19174 |
UniProt: | Q96MX0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
T cell | 1.14e-21 | 25 |
pro-T cell | 1.14e-21 | 25 |
mature alpha-beta T cell | 3.22e-20 | 18 |
alpha-beta T cell | 3.22e-20 | 18 |
immature T cell | 3.22e-20 | 18 |
mature T cell | 3.22e-20 | 18 |
immature alpha-beta T cell | 3.22e-20 | 18 |
hematopoietic stem cell | 7.16e-13 | 168 |
hematopoietic cell | 1.65e-12 | 177 |
CD8-positive, alpha-beta T cell | 4.97e-12 | 11 |
hematopoietic oligopotent progenitor cell | 1.13e-09 | 161 |
hematopoietic multipotent progenitor cell | 1.13e-09 | 161 |
lymphoid lineage restricted progenitor cell | 1.50e-09 | 52 |
lymphocyte | 3.16e-09 | 53 |
common lymphoid progenitor | 3.16e-09 | 53 |
CD4-positive, alpha-beta T cell | 1.34e-08 | 6 |
mesenchymal cell | 2.12e-08 | 354 |
leukocyte | 2.32e-08 | 136 |
connective tissue cell | 8.66e-08 | 361 |
nongranular leukocyte | 1.42e-07 | 115 |
hematopoietic lineage restricted progenitor cell | 7.64e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
blood | 7.38e-09 | 15 |
haemolymphatic fluid | 7.38e-09 | 15 |
organism substance | 7.38e-09 | 15 |
connective tissue | 2.72e-07 | 371 |
Ontology term | p-value | n |
---|---|---|
leukemia | 2.14e-07 | 39 |