FFCP PHASE1:Hg19::chr16:67679007..67679059,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr16:67679007..67679059,+
|short_description=p3@RLTPR
|description=CAGE_peak_3_at_RLTPR_5end
|association_with_transcript=0bp_to_ENST00000334583,ENST0000039828...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=146206 | |EntrezGene=146206 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=27089 | |HGNC=27089 | ||
|TSSclassifier=strong | |||
|UniProt=Q6F5E8,E7EW12 | |UniProt=Q6F5E8,E7EW12 | ||
|association_with_transcript=0bp_to_ENST00000334583,ENST00000398282,NM_001013838,uc002etn.2,uc010cel.1,uc010vjr.1_5end | |||
|cluster_id=chr16:67679007..67679059,+ | |||
|coexpression_cluster_id=C57 | |||
|description=CAGE_peak_3_at_RLTPR_5end | |||
|id=chr16:67679007..67679059,+ | |||
|ontology_enrichment_celltype=CL:0000542!1.66e-36!53;CL:0000051!1.66e-36!53;CL:0000838!9.23e-36!52;CL:0000037!4.09e-25!172;CL:0000566!4.09e-25!172;CL:0000988!8.80e-25!182;CL:0002032!1.44e-21!165;CL:0000837!1.44e-21!165;CL:0000738!3.93e-18!140;CL:0000084!4.28e-18!25;CL:0000827!4.28e-18!25;CL:0000945!9.57e-17!24;CL:0000826!9.57e-17!24;CL:0000791!1.96e-15!18;CL:0000789!1.96e-15!18;CL:0002420!1.96e-15!18;CL:0002419!1.96e-15!18;CL:0000790!1.96e-15!18;CL:0002087!1.16e-14!119;CL:0002031!1.68e-14!124;CL:0000236!2.72e-12!14;CL:0000625!1.08e-09!11 | |||
|ontology_enrichment_celltype_v019=CL:0000542;2.22e-31;53!CL:0000084;1.32e-26;25!CL:0000945;1.66e-24;24!CL:0000791;2.87e-22;18!CL:0000789;2.87e-22;18!CL:0002419;2.87e-22;18!CL:0000236;1.53e-16;13!CL:0000625;9.98e-14;11!CL:0000624;7.76e-09;6!CL:0002087;1.18e-07;104!CL:0000988;8.02e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,1.71e-54,53;CL:0000051,1.71e-54,53;CL:0000838,2.23e-53,52;CL:0000988,7.48e-34,177;CL:0000037,7.02e-33,168;CL:0002032,8.26e-28,161;CL:0000837,8.26e-28,161;CL:0000084,1.43e-26,25;CL:0000827,1.43e-26,25;CL:0000738,4.82e-26,136;CL:0000945,1.51e-24,24;CL:0000826,1.51e-24,24;CL:0000791,3.18e-22,18;CL:0000789,3.18e-22,18;CL:0002420,3.18e-22,18;CL:0002419,3.18e-22,18;CL:0000790,3.18e-22,18;CL:0002087,5.92e-22,115;CL:0002031,1.12e-20,120;CL:0000236,1.55e-17,14;CL:0000625,1.14e-13,11;CL:0000624,7.48e-09,6 | |||
|ontology_enrichment_development_v019=CL:0000051;2.22e-31;53!CL:0000790;2.87e-22;18 | |||
|ontology_enrichment_disease=DOID:2531!1.75e-11!51;DOID:0060083!1.75e-11!51;DOID:1240!2.75e-09!39 | |||
|ontology_enrichment_disease_v019=DOID:2531;4.90e-09;51!DOID:0060083;4.90e-09;51!DOID:1240;7.92e-08;39!DOID:0060058;2.38e-07;10 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,1.18e-13,51;DOID:0060083,1.18e-13,51;DOID:1240,2.11e-10,39;DOID:0060058,2.30e-07,10 | |||
|ontology_enrichment_uberon=UBERON:0000178!1.23e-10!15;UBERON:0000179!1.23e-10!15;UBERON:0000463!1.23e-10!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;4.18e-15;15!UBERON:0000179;4.18e-15;15!UBERON:0000463;4.18e-15;15!UBERON:0002390;1.68e-10;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,4.52e-15,15;UBERON:0000179,4.52e-15,15;UBERON:0000463,4.52e-15,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,1.39560233594486,0,0,0,0,0,0,0,0,0,0.204000691244253,0,0,0,0,9.62808912424186,6.73224833489555,6.69041641166274,0.786728553697808,1.53531759238885,1.54816123316076,0,0,0,7.35938405512865,11.800046296456,4.40400659002271,0,3.20871115952227,2.82114131930607,0,1.6194683300949,0,0,0,0,0,0.411167888021826,0,0,0.256160706529101,0,0.344745680736619,0.645484683583826,0,0.188242339542605,0,0,0,0,0,0,0.199463657621632,0,0,0.56738522469114,0,0.251248665256743,0,0.217188844705117,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0,15.839662001519,19.1148513941746,14.2321480618169,10.6682555641627,13.2130675721884,14.9435634388166,15.8650769468367,9.54053754535364,17.6456020423929,18.2043528704991,17.5845684937605,7.93027971474155,5.60508562981536,5.53106578027662,11.9992959769438,16.5064520354649,19.1209394069544,14.3780386035983,20.5331027979162,18.9379122293893,35.068811113424,11.5866875160581,16.4979308185909,14.3997031479354,16.2482318259009,18.3170587207715,17.5580119205836,16.9371041741786,18.239101173866,15.3595635439578,24.615569484902,26.7540828089713,35.5420780936921,13.5971211237079,10.3469533272519,15.1196076012357,15.1811815211702,15.2911398875566,20.183587069549,9.50452044448374,9.63680762097746,11.1348351704344,12.4930726552346,15.1537441308171,9.85353596305256,12.9028315663829,9.09296665663925,12.8893719455691,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.654895377488563,0,0.370784442784429,0,0.348259474598534,0.398873881556595,6.91622810485492,3.43196946468077,11.5151825412165,0,0,0,0,0.419499436209906,0,0,0,0,0.66944122552934,0,0,0,0,0,0.0892997282840798,0.22452937262617,0.112611480483322,0,0.949265659568129,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.80539524098069,3.71083351300159,1.51052125730374,0.725627385107593,2.01856680700503,0.72995471815166,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.0999870760007,0.737930631258681,0,0,0,0,0.740707561268237,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0.148631162288728,0,0,0.141775097242386,0,0,0,0,0.44024217006613,1.65862492432618,1.00883967391873,2.39860623510122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0,0,0,0,0,0,0,0,22.1928585107184,7.48716888767323,7.33133754522359,8.08561128562415,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0,0,0,7.03011288817817,4.74571241800957,9.28529752889966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.966875596732978,0,0,0,0,0,0.451199612907412,0.539107359730903,3.13739907670742,0,0.633309773357254,0,0,0,0,0,1.00337954770971,0,0,0,0,0.261435451024901,0.256450125116389,0.328014645699706,0,0.824328093181778,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281695602532241,0,0,0,0,0,0,0,0,0,0,0,0.470719003883896,0,0,0,0,5.07447609232169,6.117097657139,13.1018853050057,7.62341681464925,4.52498500394814,8.43015304550532,8.10047155857172,11.8968776444141,0.961416640147258,0,0,10.590780982166,5.19369166715201,6.33162405800886,10.6815602728311,5.78780177155168,4.0216127727797,13.3354357116046,2.921597462471,8.14311816529031,0,0.47003968731907,20.0507581672054,5.75592044525451,0.1605880751037,0.201799707191048,1.27753871307098,2.06103206853459,0,0,0,0,0,4.92349595790849,0,2.66457574398256,4.22961015263549,0,0.146508179271894,0,2.78608460693696,0,0,0,0,0,0.140669416410513,0,0,1.68900326502395,0.19924798825107,8.01223355040328,2.26739473068848,0.20453736500431,8.49285157681379,0,0,0,0.511572370226872,0.197286811273867,4.7896618469388,0,0,0,0,0.260427761085233,0,0,0,8.13611680936852,1.41832609060762,2.06846023944879,0,0.694499979733169,0,0.361789315876224,0,0.110579259931225,0,0.219385397153973,0,0,0.153900517007594,0,5.99466151408956,3.32103284316157,2.06430006651815,0.31900115973192,0.0915975934018623,0.533034776018635,9.19739683761629,1.8837630767403,8.31058409500782,0.225595660617181,0,0.167821586975843,0,1.11255605286265,0,0,1.83758992864123,0,0.995261931078505,0.707660516026713,0,7.11650708833493,9.88511511572023,7.51838036439279,0.134802265961354,0,0.234264445725339,12.9542900343123,0,0,0,3.62972148145992,0,0.252746318513952,1.05226393590145,0.103688191397247,0,0,0,0,1.13843818411917,0,0,0,0,0.17472666824203,0,0,0,0,0.678923115418936,0.794305140223502,0,0.685209623233754,0,0.126621591911757,0,0,0.426905989478705,0,0,1.03082936549324,4.63306494227304,0,0.248505071130865,3.29971648463514,0,0,0,0,0,0.136905378891993,11.4971929260275,0,13.407255068245,0.279282401272254,0.229160424011684,0,0,0,0,0,0,5.82479747637269,0.157566364614447,0.329663433524666,0.13480708770837,0,7.28190655765746,0.795229689809303,0,2.08979093004525,1.51293380256957,2.9080823662043,3.37460837327251,8.51182150013745,0.0607495566580247,0,0.0788057072991982,0.104909176269996,1.47840471127169,0,0,0,0,0,0,0,0,0,1.72394293573612,0,0,0,0,0,0.26446520348538,0,0,0.640724475406168,0.314408610199332,0.414239055347196,11.4118185016749,4.9402907974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| ||
|short_description=p3@RLTPR | |||
}} | }} |
Latest revision as of 11:51, 17 September 2015
Short description: | p3@RLTPR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_RLTPR_5end |
Coexpression cluster: | C57_Neutrophils_Eosinophils_Whole_CD4_CD8_CD19_Natural |
Association with transcript: | 0bp_to_ENST00000334583, ENST00000398282, NM_001013838, uc002etn.2, uc010cel.1, uc010vjr.1_5end |
EntrezGene: | RLTPR |
HGNC: | 27089 |
UniProt: | Q6F5E8E7EW12 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 1.71e-54 | 53 |
common lymphoid progenitor | 1.71e-54 | 53 |
lymphoid lineage restricted progenitor cell | 2.23e-53 | 52 |
hematopoietic cell | 7.48e-34 | 177 |
hematopoietic stem cell | 7.02e-33 | 168 |
hematopoietic oligopotent progenitor cell | 8.26e-28 | 161 |
hematopoietic multipotent progenitor cell | 8.26e-28 | 161 |
T cell | 1.43e-26 | 25 |
pro-T cell | 1.43e-26 | 25 |
leukocyte | 4.82e-26 | 136 |
lymphocyte of B lineage | 1.51e-24 | 24 |
pro-B cell | 1.51e-24 | 24 |
mature alpha-beta T cell | 3.18e-22 | 18 |
alpha-beta T cell | 3.18e-22 | 18 |
immature T cell | 3.18e-22 | 18 |
mature T cell | 3.18e-22 | 18 |
immature alpha-beta T cell | 3.18e-22 | 18 |
nongranular leukocyte | 5.92e-22 | 115 |
hematopoietic lineage restricted progenitor cell | 1.12e-20 | 120 |
B cell | 1.55e-17 | 14 |
CD8-positive, alpha-beta T cell | 1.14e-13 | 11 |
CD4-positive, alpha-beta T cell | 7.48e-09 | 6 |
Ontology term | p-value | n |
---|---|---|
blood | 4.52e-15 | 15 |
haemolymphatic fluid | 4.52e-15 | 15 |
organism substance | 4.52e-15 | 15 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 1.18e-13 | 51 |
immune system cancer | 1.18e-13 | 51 |
leukemia | 2.11e-10 | 39 |
lymphoma | 2.30e-07 | 10 |