FFCP PHASE1:Hg19::chr12:76445101..76445104,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:76445101..76445104,- | |||
|description=CAGE_peak_at_chr12:76445101..76445104,- | |description=CAGE_peak_at_chr12:76445101..76445104,- | ||
|id=chr12:76445101..76445104,- | |id=chr12:76445101..76445104,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000623;1.05e-15;3!CL:0000791;2.15e-15;18!CL:0000789;2.15e-15;18!CL:0002419;2.15e-15;18!CL:0000319;2.07e-12;1!CL:0000084;4.57e-11;25!CL:0000625;9.53e-10;11!CL:0000624;2.61e-08;6!CL:0000840;2.61e-08;5!CL:0000542;8.68e-08;53!CL:0000159;7.82e-07;2!CL:0001014;7.82e-07;2!CL:0001016;7.82e-07;2!CL:1000415;7.82e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000623,4.30e-16,3;CL:0000825,4.30e-16,3;CL:0000791,2.62e-15,18;CL:0000789,2.62e-15,18;CL:0002420,2.62e-15,18;CL:0002419,2.62e-15,18;CL:0000790,2.62e-15,18;CL:0000838,7.68e-13,52;CL:0000542,1.39e-12,53;CL:0000051,1.39e-12,53;CL:0000319,3.08e-12,1;CL:0000084,5.27e-11,25;CL:0000827,5.27e-11,25;CL:0000625,9.98e-10,11;CL:0002031,1.41e-09,120;CL:0000840,2.81e-08,5;CL:0001029,2.81e-08,5;CL:0000738,2.83e-08,136;CL:0002087,3.13e-08,115;CL:0000624,3.13e-08,6;CL:0001014,6.80e-07,2;CL:0001016,6.80e-07,2;CL:1000415,8.06e-07,2;CL:0002032,9.40e-07,161;CL:0000837,9.40e-07,161;CL:0000159,9.54e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000790;2.15e-15;18!CL:0000051;8.68e-08;53 | |||
|ontology_enrichment_disease=DOID:14566!7.49e-09!239;DOID:162!8.76e-09!235 | |ontology_enrichment_disease=DOID:14566!7.49e-09!239;DOID:162!8.76e-09!235 | ||
|ontology_enrichment_disease_v019=DOID:3030;2.07e-12;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3030,3.08e-12,1 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0002426;2.07e-12;1!UBERON:0003831;2.07e-12;1!UBERON:0003898;2.07e-12;1!UBERON:0004830;2.07e-12;1!UBERON:0003830;2.07e-12;1!UBERON:0005175;2.07e-12;1!UBERON:0001774;2.07e-12;1!UBERON:0001103;2.07e-12;1!UBERON:0005090;7.82e-07;2!UBERON:0001630;7.82e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002426,1.40e-12,1;UBERON:0003831,1.40e-12,1;UBERON:0003898,1.40e-12,1;UBERON:0004830,1.40e-12,1;UBERON:0003830,1.40e-12,1;UBERON:0005175,1.40e-12,1;UBERON:0001774,1.40e-12,1;UBERON:0001103,1.40e-12,1;UBERON:0010084,1.40e-12,1;UBERON:0005090,6.42e-07,2;UBERON:0001630,6.42e-07,2 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0.410623275218653,0.251085279189606,0.229240217243854,0.164201178899891,0.0787107813136792,0,0,0.154816123316076,0,0,0,0,0.710846162437108,0.293600439334847,0,0,0.217010870715852,0,0,0,0,0,0.242584061187816,0,0,0.619412741790207,0.28769239232215,0,0,0,0,1.35426486594342,0,0,0.224723484445085,0.612167784741805,0.320929027076094,0,0,0,0,0,0,0,0.251248665256743,0,0,0,0.368277635987565,0,0.211255286311942,0,0.209658645508376,0,0,0,0.285012743741249,0,0.182664153764634,0,0,0,0,0,0,0,0,1.70763890732835,0,0.382273228125229,0,0,0,1.37696839079683,1.17903228824749,0.822405995998037,0,0,0.946895611469467,0,0,0.294605907474837,0.443067789167242,0.270803863765016,0.25618263945135,0.260118695119756,0,0.276350017785848,0,0,0,0,0,0,0,0.253019692019503,0.318565414324097,0,0,0,0,0,0,0,1.00803371612366,1.87208137048455,2.31719046212478,0,0,0,0.361439152384566,0,0,0,0,0.0945348171640679,0,0.351339142772504,0.0654895377488563,0,0,0,0,0,1.19245312152671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.367663080345869,0,0.17859945656816,0,0.112611480483322,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352303495931295,0,0.140450806702248,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0,0.358779271377724,0,0.211931901159562,0,0,0,0,0.506328996723799,0,0.252433774244115,0.0920498986422993,0,0,0,0.169560592310488,0.193260853163297,0,0,0,0.132529768321485,0,0,0,1.09493207722749,0,0,1.38134921352481,0,0,0,0,0.241011029883482,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0,0.441463099414651,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0,0.144119953416961,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289562613335158,0.205476322550383,0,0.560425719967636,0.591092280605782,1.94064817373566,1.66845947163673,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0.207970861530807,0,0,0.117141414992713,0,0,0,0,0,0.173767228936166,0,0,0,0.215714200818617,0.106727557803444,0,0,0,0,0.306923946576125,0,0,0,0,0,0,0,0.0821271560138091,0,0,0.362578348774867,0,0,0,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0,0.0915694648183434,0.165018999841176,0,0,0,0,0.770243085573222,0.460511024178389,0,0.214840489736547,0.145016693914229,0.0852266274161009,0,0,0,0,0.10115778085555,0,0.31481234683064,0,0,0,0,0,0.286249773483982,0,0,0.190630193923825,0,0,0,0,0.179872457583315,0.274537029736055,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0.28853842595289,0.142283686696828,0.797131363644112,0,0,0.211673582723883,0,0.561594356226918,0,0.313359791546046,0,0,0.321176150207399,0,0,0,0,0,0,0.19538809540204,0,0,0,0,0,0,0,0.121360521749513,0,0.284136146806413,0,0.296964680832639,0.307160702099232,0,0.140669416410513,0.111308705022906,0.16480387422676,0.844501632511974,0.19924798825107,0.552567831062295,0,0,0,0,0.0898683511473268,0.358042349351218,0,0.0986434056369336,0,0,0,0,0,0,0,0,0.227586896570999,0,0,0.344743373241465,0.583209226766509,0.173624994933292,0,0.482385754501632,0,0.110579259931225,0,0,0,0,0.0769502585037971,0.227884111694002,0,0.0897576444097721,0.325942115766024,0,0,0,0,0.156980256395025,0,0.225595660617181,0,0,0.189753732724185,0,0,0,0,0,0,0,0,0.296521128680622,0,0.208843899010911,0.067401132980677,1.60515529459758,0,0.547364367646998,0,0.728341138602278,0,0,0,0,0,0,0.664653872707185,0.330991955875499,0,0,0.284609546029793,0.416024019039416,0,0,0,0.17472666824203,0,0.290268993867255,0,0.328461828212837,0,0,0,0.274083849293502,0.397429223405979,0,1.36885967914362,0,0.213452994739353,0.39961921916426,0,0.229073192331831,0.343189995723929,0,0,0,0.135904206073614,0.313808538937,0.101998217636322,0,0,0,0,0,0.788662062837943,0,0,0,0,0,0,0.134366944973453,0.360299883542404,0,0,0,0.13480708770837,0,0.169346664131569,0,0.408610218334727,0.160753148465019,0.275078873194468,1.24632101408756,0.2249738915515,1.5476039091159,0.0607495566580247,0,0,0,0.105600336519406,0.35857467866569,0,0,0,0,0.542999601753713,0,0,0,0.164185041498678,0.170388021785422,0,0,2.65013777824443,0.129282956361551,0.13223260174269,0.342173675768659,0,0,0,0,0,0.197611631897944,0,0,0,0,0,0,0.157054096250234,0,0,0,0.573409195690071,0.110929051536852,0,0.415045904808692,0,0.151649117541648,0,0.235265819698172,0,0,0,0,0,0,0.251567901752575,0,0,0,0.310874401165561,0.147855149989634,0,0,0.155262956876259,0,0,0,0.150257608997218,0.380805212168795,0,0,0,0,0.398095888698616,0,0,0,0,0.192619830407303,0.214441591374926,0.260994291965212,0.226705925512272,0,0.244736704506468,0,0,0,0,0.578742114812744,0.506827321959218,0,0,0.607719912354764,0,0,0.132864840313363,0,0,1.2288645437686,0.211312123358627,0.19998739585493,0,0,0,0,0.139879507719444,0,0,0,0.157265941855896,0.218419276384028,0.509197589862076,0.425149840203366,0.619678821295011,0.558644917973244,0,0.0788617450012534,0,0,0,0,0,0.1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| ||
|short_description=p@chr12:76445101..76445104,- | |short_description=p@chr12:76445101..76445104,- | ||
}} | }} |
Latest revision as of 12:26, 24 July 2015
Short description: | p@chr12:76445101..76445104, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:76445101..76445104, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
natural killer cell | 4.30e-16 | 3 |
pro-NK cell | 4.30e-16 | 3 |
mature alpha-beta T cell | 2.62e-15 | 18 |
alpha-beta T cell | 2.62e-15 | 18 |
immature T cell | 2.62e-15 | 18 |
mature T cell | 2.62e-15 | 18 |
immature alpha-beta T cell | 2.62e-15 | 18 |
lymphoid lineage restricted progenitor cell | 7.68e-13 | 52 |
lymphocyte | 1.39e-12 | 53 |
common lymphoid progenitor | 1.39e-12 | 53 |
mucus secreting cell | 3.08e-12 | 1 |
T cell | 5.27e-11 | 25 |
pro-T cell | 5.27e-11 | 25 |
CD8-positive, alpha-beta T cell | 9.98e-10 | 11 |
hematopoietic lineage restricted progenitor cell | 1.41e-09 | 120 |
immature conventional dendritic cell | 2.81e-08 | 5 |
common dendritic progenitor | 2.81e-08 | 5 |
leukocyte | 2.83e-08 | 136 |
nongranular leukocyte | 3.13e-08 | 115 |
CD4-positive, alpha-beta T cell | 3.13e-08 | 6 |
CD1a-positive Langerhans cell | 6.80e-07 | 2 |
immature CD1a-positive Langerhans cell | 6.80e-07 | 2 |
epithelial cell of gall bladder | 8.06e-07 | 2 |
hematopoietic oligopotent progenitor cell | 9.40e-07 | 161 |
hematopoietic multipotent progenitor cell | 9.40e-07 | 161 |
seromucus secreting cell | 9.54e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
chest muscle | 1.40e-12 | 1 |
respiratory system muscle | 1.40e-12 | 1 |
skeletal muscle of trunk | 1.40e-12 | 1 |
respiratory system skeletal muscle | 1.40e-12 | 1 |
thoracic segment muscle | 1.40e-12 | 1 |
chest organ | 1.40e-12 | 1 |
muscle of trunk | 1.40e-12 | 1 |
diaphragm | 1.40e-12 | 1 |
future diaphragm | 1.40e-12 | 1 |
muscle structure | 6.42e-07 | 2 |
muscle organ | 6.42e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
mucinous adenocarcinoma | 3.08e-12 | 1 |