FFCP PHASE1:Hg19::chr1:207500090..207500105,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1604 | |EntrezGene=1604 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=2665 | |HGNC=2665 | ||
|TSSclassifier=strong | |||
|UniProt=Q8TD14 | |UniProt=Q8TD14 | ||
|association_with_transcript=-38bp_to_AY055757_5end | |association_with_transcript=-38bp_to_AY055757_5end | ||
|cluster_id=chr1:207500090..207500105,+ | |||
|coexpression_cluster_id=C531 | |||
|description=CAGE_peak_6_at_CD55_5end | |description=CAGE_peak_6_at_CD55_5end | ||
|id=chr1:207500090..207500105,+ | |id=chr1:207500090..207500105,+ | ||
|ontology_enrichment_celltype=CL:0000860!4.43e-19!45;CL:0002057!5.61e-17!42;CL:0002009!6.02e-09!65;CL:0000766!2.45e-08!76;CL:0000839!2.95e-08!70;CL:0000557!3.16e-08!71;CL:0002194!4.33e-08!63;CL:0000576!4.33e-08!63;CL:0000040!4.33e-08!63;CL:0000559!4.33e-08!63;CL:0000738!1.63e-07!140 | |ontology_enrichment_celltype=CL:0000860!4.43e-19!45;CL:0002057!5.61e-17!42;CL:0002009!6.02e-09!65;CL:0000766!2.45e-08!76;CL:0000839!2.95e-08!70;CL:0000557!3.16e-08!71;CL:0002194!4.33e-08!63;CL:0000576!4.33e-08!63;CL:0000040!4.33e-08!63;CL:0000559!4.33e-08!63;CL:0000738!1.63e-07!140 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.12e-24;33!CL:0002057;1.12e-24;33!CL:0000473;6.25e-16;39!CL:0000234;6.25e-16;39!CL:0000576;2.25e-12;48!CL:0000766;5.53e-10;69!CL:0000775;1.69e-07;3!CL:0002537;9.83e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.53e-23,42;CL:0002057,1.53e-23,42;CL:0000473,1.07e-19,48;CL:0000234,1.07e-19,48;CL:0000766,7.97e-17,72;CL:0002009,1.33e-16,61;CL:0000557,1.04e-15,67;CL:0002194,2.28e-14,59;CL:0000576,2.28e-14,59;CL:0000040,2.28e-14,59;CL:0000559,2.28e-14,59;CL:0000839,2.71e-13,66;CL:0000763,1.94e-10,108;CL:0000049,1.94e-10,108;CL:0000738,9.67e-09,136;CL:0000775,1.61e-07,3;CL:0002537,4.45e-07,5;CL:0002031,4.52e-07,120 | |||
|ontology_enrichment_development_v019=CL:0002057;3.43e-18;42!UBERON:0008947;5.59e-09;29 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001737!5.58e-08!9 | |ontology_enrichment_uberon=UBERON:0001737!5.58e-08!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.05e-20;9!UBERON:0001557;1.05e-20;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,9.93e-21,9;UBERON:0002371,5.47e-13,76;UBERON:0001474,1.61e-11,82;UBERON:0002390,2.79e-11,98;UBERON:0003061,2.79e-11,98;UBERON:0004765,7.02e-10,90;UBERON:0002193,1.58e-09,108;UBERON:0002405,2.42e-09,93;UBERON:0001434,5.28e-09,100;UBERON:0001557,1.14e-08,19;UBERON:0003081,1.73e-07,203;UBERON:0008947,2.42e-07,38;UBERON:0003258,2.42e-07,38 | |||
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| ||
|short_description=p6@CD55 | |short_description=p6@CD55 | ||
}} | }} |
Latest revision as of 07:48, 20 September 2015
Short description: | p6@CD55 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_CD55_5end |
Coexpression cluster: | C531_Neutrophils_Eosinophils_large_CD14_rectal_epitheloid_Hep2 |
Association with transcript: | -38bp_to_AY055757_5end |
EntrezGene: | CD55 |
HGNC: | 2665 |
UniProt: | Q8TD14 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.53e-23 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.53e-23 | 42 |
defensive cell | 1.07e-19 | 48 |
phagocyte | 1.07e-19 | 48 |
myeloid leukocyte | 7.97e-17 | 72 |
macrophage dendritic cell progenitor | 1.33e-16 | 61 |
granulocyte monocyte progenitor cell | 1.04e-15 | 67 |
monopoietic cell | 2.28e-14 | 59 |
monocyte | 2.28e-14 | 59 |
monoblast | 2.28e-14 | 59 |
promonocyte | 2.28e-14 | 59 |
myeloid lineage restricted progenitor cell | 2.71e-13 | 66 |
myeloid cell | 1.94e-10 | 108 |
common myeloid progenitor | 1.94e-10 | 108 |
leukocyte | 9.67e-09 | 136 |
neutrophil | 1.61e-07 | 3 |
amnion mesenchymal stem cell | 4.45e-07 | 5 |
hematopoietic lineage restricted progenitor cell | 4.52e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
larynx | 9.93e-21 | 9 |
bone marrow | 5.47e-13 | 76 |
bone element | 1.61e-11 | 82 |
hematopoietic system | 2.79e-11 | 98 |
blood island | 2.79e-11 | 98 |
skeletal element | 7.02e-10 | 90 |
hemolymphoid system | 1.58e-09 | 108 |
immune system | 2.42e-09 | 93 |
skeletal system | 5.28e-09 | 100 |
upper respiratory tract | 1.14e-08 | 19 |
lateral plate mesoderm | 1.73e-07 | 203 |
respiratory primordium | 2.42e-07 | 38 |
endoderm of foregut | 2.42e-07 | 38 |