FFCP PHASE1:Hg19::chr17:38609237..38609305,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr17:38609237..38609305,+
|short_description=p@chr17:38609237..38609305,+
|description=CAGE_peak_at_chr17:38609237..38609305,+
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr17:38609237..38609305,+ | |||
|coexpression_cluster_id=C353 | |||
|description=CAGE_peak_at_chr17:38609237..38609305,+ | |||
|id=chr17:38609237..38609305,+ | |||
|ontology_enrichment_celltype=CL:0000055!5.49e-22!180;CL:0000222!1.68e-18!119;CL:0000057!2.04e-14!75;CL:0000183!2.12e-14!59;CL:0000680!1.22e-13!57;CL:0000056!1.22e-13!57;CL:0000355!1.22e-13!57;CL:0000187!2.06e-12!54;CL:0000393!3.09e-11!60;CL:0000211!3.09e-11!60;CL:0000192!6.26e-11!42;CL:0000514!6.26e-11!42;CL:0000220!3.53e-08!246;CL:0002321!3.76e-08!248;CL:0000359!7.42e-08!32;CL:0000213!3.79e-07!57;CL:0000215!3.79e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:0000192;1.43e-08;43!CL:0000359;1.45e-07;32!CL:0000187;2.24e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,5.53e-18,121;CL:0000057,7.93e-15,76;CL:0000680,2.55e-14,58;CL:0000056,2.55e-14,58;CL:0000355,2.55e-14,58;CL:0000187,6.68e-13,55;CL:0000192,2.74e-11,43;CL:0000514,2.74e-11,43;CL:0000393,1.47e-10,61;CL:0000211,1.47e-10,61;CL:0000359,1.45e-07,32 | |||
|ontology_enrichment_development_v019=CL:0000514;1.43e-08;43!CL:0000355;2.89e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002100!1.24e-20!216;UBERON:0005256!5.96e-20!143;UBERON:0000490!8.83e-18!138;UBERON:0003914!6.61e-16!118;UBERON:0002049!2.49e-15!79;UBERON:0007798!2.49e-15!79;UBERON:0000914!3.83e-15!83;UBERON:0002329!3.83e-15!83;UBERON:0003077!3.83e-15!83;UBERON:0003059!3.83e-15!83;UBERON:0007282!3.83e-15!83;UBERON:0009618!3.83e-15!83;UBERON:0007285!3.83e-15!83;UBERON:0002385!6.84e-15!63;UBERON:0001015!6.84e-15!63;UBERON:0000383!6.84e-15!63;UBERON:0001134!1.84e-14!61;UBERON:0002036!1.84e-14!61;UBERON:0003082!1.84e-14!61;UBERON:0004872!2.60e-14!84;UBERON:0003104!9.24e-14!238;UBERON:0009142!9.24e-14!238;UBERON:0004290!1.85e-13!70;UBERON:0000486!4.86e-13!82;UBERON:0000055!2.12e-12!69;UBERON:0001981!3.84e-12!60;UBERON:0007500!3.84e-12!60;UBERON:0004537!3.84e-12!60;UBERON:0006965!3.84e-12!60;UBERON:0001009!8.24e-11!113;UBERON:0004535!1.68e-10!110;UBERON:0000481!2.25e-10!347;UBERON:0000475!5.52e-10!365;UBERON:0001637!2.38e-09!42;UBERON:0003509!2.38e-09!42;UBERON:0004572!2.38e-09!42;UBERON:0000477!2.90e-09!286;UBERON:0004573!8.67e-09!33;UBERON:0004571!8.67e-09!33;UBERON:0009569!9.74e-09!113;UBERON:0000468!3.23e-08!659;UBERON:0000926!5.99e-08!448;UBERON:0004120!5.99e-08!448;UBERON:0006603!5.99e-08!448;UBERON:0000119!6.56e-08!312;UBERON:0000483!1.26e-07!309;UBERON:0004111!7.99e-07!241 | |||
|ontology_enrichment_uberon_v019=UBERON:0002385;2.90e-09;31!UBERON:0001015;2.90e-09;31!UBERON:0000383;2.90e-09;31!UBERON:0004573;5.04e-08;33!UBERON:0004571;5.04e-08;33!UBERON:0001637;8.06e-07;42!UBERON:0003509;8.06e-07;42!UBERON:0004572;8.06e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003104,1.07e-19,160;UBERON:0009142,1.07e-19,160;UBERON:0005256,4.82e-18,122;UBERON:0002100,5.26e-16,199;UBERON:0002385,8.11e-16,64;UBERON:0001015,8.11e-16,64;UBERON:0000383,8.11e-16,64;UBERON:0000490,1.04e-15,148;UBERON:0007503,1.22e-15,78;UBERON:0001134,2.64e-15,62;UBERON:0002036,2.64e-15,62;UBERON:0003082,2.64e-15,62;UBERON:0007524,5.69e-14,73;UBERON:0002049,6.76e-14,78;UBERON:0007798,6.76e-14,78;UBERON:0002329,8.00e-14,71;UBERON:0003059,8.00e-14,71;UBERON:0007282,8.00e-14,71;UBERON:0004290,8.00e-14,71;UBERON:0009618,8.00e-14,71;UBERON:0003077,2.32e-13,72;UBERON:0007285,2.32e-13,72;UBERON:0003914,3.91e-13,117;UBERON:0004872,7.55e-13,83;UBERON:0000055,1.02e-11,68;UBERON:0000486,2.28e-11,83;UBERON:0007500,4.16e-11,59;UBERON:0001981,4.16e-11,59;UBERON:0004537,4.16e-11,59;UBERON:0006965,4.16e-11,59;UBERON:0001009,4.53e-10,112;UBERON:0004535,6.30e-10,109;UBERON:0000926,1.34e-09,315;UBERON:0004120,1.34e-09,315;UBERON:0006603,1.34e-09,315;UBERON:0001637,5.99e-09,42;UBERON:0003509,5.99e-09,42;UBERON:0004572,5.99e-09,42;UBERON:0004573,1.08e-08,33;UBERON:0004571,1.08e-08,33;UBERON:0009569,1.97e-07,112 | |||
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|phase1_expression=14.8976271001856,19.0549466262975,14.0954404095971,24.0175916047513,15.1966772105278,22.6808016266096,22.796989035148,4.42203911398782,7.83556884599516,0.491467873003018,2.79120467188971,0.436882744260345,0.263766978228454,13.7380651785652,24.5234058038658,3.36162573225888,3.61616716814386,4.38186054232424,0.975865597581014,0.492484232307152,2.85600967741954,0.940364164434263,0,0.547497700291537,0.502170558379211,0,0,0.0787107813136792,0,0.383829398097213,0,0,1.8072355126695,0.369754010166788,0,0,0,0.553995408531877,0,0.217010870715852,0.895661896959697,0.32389366601898,0.77272670290256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574752439954483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0.328875809207352,0,0.579606171470105,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0.267440195783507,0,0,1.34140171940727,0.639312809217652,14.8190052477672,17.5468268722561,27.955378159439,0,14.5990461090791,0.378139268656271,2.66075276955077,2.54720878510066,1.30979075497713,0,0.370784442784429,0,0,0,0,0,0,0.79504962946682,4.30117297553062,2.08284300964557,3.39184765154406,1.25849830862972,4.95212475492121,1.25396979922086,1.29208379584664,2.13459757612026,1.33888245105868,1.61131726843659,3.80136052859256,3.41686880567437,2.20597848207521,1.62028389576352,2.58969212023831,2.02076435363553,2.36484109014977,3.06633274931766,2.84779697870439,3.29763139074733,0,0,0,4.96971951695318,3.79891534993739,1.45650098894541,4.87622255272983,5.67469411517371,6.72813120170769,4.2699598291882,4.9333509683432,0.933633106199299,0.942974704487816,1.30769522490767,8.77873080340602,5.18558332031999,0.937285727335186,2.49728061464256,0,3.43731965269142,0.587172493218824,0.323745888736263,0.140450806702248,6.32877930890169,2.45668634623536,10.6425554611038,20.1960485737949,35.6064378161122,1.82032272387605,4.31170885089743,1.0100166837244,1.25118519871964,1.6623846929051,10.0964852802593,22.6800968891275,39.8130856102482,0.226864366320042,1.07633781413317,6.40672166455702,5.93409323246773,3.60109315301283,5.15262646192194,1.03056216018252,6.51408997160564,1.0126579934476,2.14361411354637,1.26216887122057,5.24684422261106,6.7891343863901,1.42003837006646,1.71278566986988,4.74769658469365,0.386521706326594,0.545492241181669,0.573609190778008,0.365921118388786,0.530119073285941,0.464775771478074,0.414644220061482,0.504641701751257,0,1.56449532329816,5.78916844373597,0,5.10804720835177,5.77503585335668,0,0.168584690078102,0,0,0,0.237270619111097,0,0,0,4.42893272774789,1.40241773803446,3.2925920906512,1.47008711385542,12.6755034821831,11.7939266001315,5.90789906681404,0,0.245976877086227,0.686271241194102,0,0,0,0.370353780634118,0.977424915930974,1.03993478527958,1.44331342025273,0,1.05667824812239,1.58803092537181,1.85194205030644,1.14152491340759,2.37061319387782,0.858486162094873,0.246217006087397,0,0,0,0.503946384596579,0,0,0.581267877027924,0.383382679165211,0,0,0,0,0,0.063497894292169,0,0,0,0.102827492703324,0.600686115687835,0.285826432630578,1.56983518083505,1.74384027533312,1.83345714552375,2.19761916788222,0,2.535908257668,2.6593811658487,6.24044621468197,5.40135485950498,7.09245660116391,7.72624319146688,4.71827379071887,8.68194568626309,9.87888404136923,0.65147236858747,4.26470338491055,5.543663110534,4.82303003295338,2.61460037580088,11.0970020212083,0,0,0,1.67737398844108,10.3375742250703,2.85273810081437,9.12122232005749,12.9450083206742,3.22309733831812,0,0,0,0.256686072559497,0.254094624222463,0,0,0.167516265334349,0.637938751653163,0,0,0,15.827202431769,33.0112543899387,12.7494561138876,13.5181059995025,16.593895958136,10.5660618072736,9.01988895443892,5.71797589482666,81.8667014601546,6.2083842775503,2.65690239414175,3.13427586520895,4.43106433787223,13.3144787074664,10.9805895619474,0,0,0.106727557803444,3.33440328590885,0,2.41912234663744,8.68377327365719,4.14347327877769,20.2075267991813,15.8892545077069,18.4214609664013,8.84696566289841,20.7785293022987,0.462629081407967,3.72879623157567,2.05317890034523,3.11552657510173,4.53220475993841,0.241718899183244,0.200506470303285,0.276242966807689,4.01850568576124,4.91646153618136,7.99858931252487,0,0.15403067420883,3.92174884588428,2.92278449306521,0.316654886678627,4.54933536283586,2.72149928442425,0.863663664408557,12.3381802152231,3.79325012561394,9.03041592938736,0.254876273045038,0,1.79099803777743,0,0,0,0,0,7.52199385028373,0.0915694648183434,0,0,0,4.82051789532479,3.28680442193215,6.16194468458577,3.53058451870098,1.51620229732984,4.40423003959922,10.7312353496529,2.55679882248303,1.60257664164127,0.495854746082934,0.768760269460425,0.255225424989168,1.11273558941105,16.7344397747023,14.7961803010401,1.3940745403212,0.924100740528266,2.12922412126809,6.08953094452551,2.7798632865588,3.2918723950658,7.07100901783368,10.1241415909992,10.1034002779627,3.07077349573601,2.1396949401696,4.77304871888905,1.56989728039846,2.51821440616641,3.56898138656871,3.06312246098785,1.21309488943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| ||
|short_description=p@chr17:38609237..38609305,+ | |||
}} | }} |
Latest revision as of 16:27, 25 July 2015
Short description: | p@chr17:38609237..38609305, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:38609237..38609305, + |
Coexpression cluster: | C353_tenocyte_Nucleus_Chondrocyte_Anulus_Fibroblast_Synoviocyte_tridermal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 5.53e-18 | 121 |
fibroblast | 7.93e-15 | 76 |
muscle precursor cell | 2.55e-14 | 58 |
myoblast | 2.55e-14 | 58 |
multi-potent skeletal muscle stem cell | 2.55e-14 | 58 |
muscle cell | 6.68e-13 | 55 |
smooth muscle cell | 2.74e-11 | 43 |
smooth muscle myoblast | 2.74e-11 | 43 |
electrically responsive cell | 1.47e-10 | 61 |
electrically active cell | 1.47e-10 | 61 |
vascular associated smooth muscle cell | 1.45e-07 | 32 |