FFCP PHASE1:Hg19::chr10:135044170..135044188,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8433 | |EntrezGene=8433 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12634 | |HGNC=12634 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=377bp_to_BC166624_5end | |association_with_transcript=377bp_to_BC166624_5end | ||
|cluster_id=chr10:135044170..135044188,+ | |||
|coexpression_cluster_id=C157 | |||
|description=CAGE_peak_7_at_UTF1_5end | |description=CAGE_peak_7_at_UTF1_5end | ||
|id=chr10:135044170..135044188,+ | |id=chr10:135044170..135044188,+ | ||
|ontology_enrichment_celltype=CL:0002057!7.32e-48!42;CL:0000860!5.71e-44!45;CL:0002194!1.41e-38!63;CL:0000576!1.41e-38!63;CL:0000040!1.41e-38!63;CL:0000559!1.41e-38!63;CL:0002009!4.74e-37!65;CL:0000766!2.04e-36!76;CL:0000839!1.29e-33!70;CL:0000557!5.47e-33!71;CL:0002087!7.12e-30!119;CL:0000763!7.95e-28!112;CL:0000049!7.95e-28!112;CL:0000738!1.53e-27!140;CL:0000037!2.64e-25!172;CL:0000566!2.64e-25!172;CL:0002031!1.23e-23!124;CL:0002032!4.00e-23!165;CL:0000837!4.00e-23!165;CL:0000988!4.72e-23!182;CL:0002393!2.53e-19!9;CL:0002397!2.53e-19!9;CL:0002322!3.37e-12!5;CL:0000842!8.17e-08!3;CL:0000875!1.48e-07!3;CL:0002396!1.48e-07!3 | |ontology_enrichment_celltype=CL:0002057!7.32e-48!42;CL:0000860!5.71e-44!45;CL:0002194!1.41e-38!63;CL:0000576!1.41e-38!63;CL:0000040!1.41e-38!63;CL:0000559!1.41e-38!63;CL:0002009!4.74e-37!65;CL:0000766!2.04e-36!76;CL:0000839!1.29e-33!70;CL:0000557!5.47e-33!71;CL:0002087!7.12e-30!119;CL:0000763!7.95e-28!112;CL:0000049!7.95e-28!112;CL:0000738!1.53e-27!140;CL:0000037!2.64e-25!172;CL:0000566!2.64e-25!172;CL:0002031!1.23e-23!124;CL:0002032!4.00e-23!165;CL:0000837!4.00e-23!165;CL:0000988!4.72e-23!182;CL:0002393!2.53e-19!9;CL:0002397!2.53e-19!9;CL:0002322!3.37e-12!5;CL:0000842!8.17e-08!3;CL:0000875!1.48e-07!3;CL:0002396!1.48e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002322;1.33e-29;5!CL:0000039;9.16e-22;7!CL:0000586;9.16e-22;7!CL:0002393;3.59e-14;6!CL:0002397;3.59e-14;6!CL:0000226;6.96e-13;3!CL:0000767;6.96e-13;3!CL:0000842;6.96e-13;3!CL:0000094;1.23e-10;8!CL:0002321;4.96e-10;15!CL:0000148;8.05e-09;10!CL:0000081;7.11e-08;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,1.78e-29,5;CL:0000039,1.02e-21,7;CL:0000586,1.02e-21,7;CL:0002393,2.26e-16,9;CL:0002397,2.26e-16,9;CL:0000226,7.40e-13,3;CL:0000842,7.40e-13,3;CL:0000767,7.86e-13,3;CL:0000766,8.88e-11,72;CL:0000094,1.55e-10,8;CL:0000738,6.61e-09,136;CL:0000148,9.45e-09,10;CL:0000541,9.45e-09,10;CL:0000763,2.91e-08,108;CL:0000049,2.91e-08,108;CL:0000037,4.30e-08,168;CL:0000081,8.41e-08,11;CL:0000988,1.45e-07,177;CL:0000860,2.40e-07,42;CL:0002057,2.40e-07,42 | |||
|ontology_enrichment_development_v019=UBERON:0009117;2.60e-15;10!UBERON:0005564;2.60e-15;10 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3095;4.86e-07;22!DOID:2994;4.86e-07;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,5.01e-07,22;DOID:2994,5.01e-07,22 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.26e-33!102;UBERON:0003061!1.26e-33!102;UBERON:0002193!7.81e-31!112;UBERON:0002371!4.85e-28!80;UBERON:0001474!8.39e-27!86;UBERON:0002405!5.41e-22!115;UBERON:0004765!3.56e-21!101;UBERON:0001434!3.56e-21!101;UBERON:0000473!4.04e-10!8;UBERON:0003081!3.26e-09!216;UBERON:0002204!9.41e-09!167;UBERON:0003135!4.22e-07!11 | |ontology_enrichment_uberon=UBERON:0002390!1.26e-33!102;UBERON:0003061!1.26e-33!102;UBERON:0002193!7.81e-31!112;UBERON:0002371!4.85e-28!80;UBERON:0001474!8.39e-27!86;UBERON:0002405!5.41e-22!115;UBERON:0004765!3.56e-21!101;UBERON:0001434!3.56e-21!101;UBERON:0000473!4.04e-10!8;UBERON:0003081!3.26e-09!216;UBERON:0002204!9.41e-09!167;UBERON:0003135!4.22e-07!11 | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;4.45e-19;8!UBERON:0003135;6.14e-14;11!UBERON:0000922;3.45e-08;49!UBERON:0000991;2.27e-07;21!UBERON:0003101;4.86e-07;22!UBERON:0000079;4.86e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,4.89e-19,8;UBERON:0003135,6.57e-14,11;UBERON:0000991,2.35e-07,21;UBERON:0009196,2.35e-07,21;UBERON:0009117,2.35e-07,21;UBERON:0005564,2.35e-07,21;UBERON:0004176,5.01e-07,22;UBERON:0003101,5.01e-07,22;UBERON:0000079,5.01e-07,22 | |||
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| ||
|short_description=p7@UTF1 | |short_description=p7@UTF1 | ||
}} | }} |
Latest revision as of 04:47, 17 September 2015
Short description: | p7@UTF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_UTF1_5end |
Coexpression cluster: | C157_testicular_H9_testis_iPS_teratocarcinoma_colon_trachea |
Association with transcript: | 377bp_to_BC166624_5end |
EntrezGene: | UTF1 |
HGNC: | 12634 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 1.78e-29 | 5 |
germ line cell | 1.02e-21 | 7 |
germ cell | 1.02e-21 | 7 |
intermediate monocyte | 2.26e-16 | 9 |
CD14-positive, CD16-positive monocyte | 2.26e-16 | 9 |
single nucleate cell | 7.40e-13 | 3 |
mononuclear cell | 7.40e-13 | 3 |
basophil | 7.86e-13 | 3 |
myeloid leukocyte | 8.88e-11 | 72 |
granulocyte | 1.55e-10 | 8 |
leukocyte | 6.61e-09 | 136 |
melanocyte | 9.45e-09 | 10 |
melanoblast | 9.45e-09 | 10 |
myeloid cell | 2.91e-08 | 108 |
common myeloid progenitor | 2.91e-08 | 108 |
hematopoietic stem cell | 4.30e-08 | 168 |
blood cell | 8.41e-08 | 11 |
hematopoietic cell | 1.45e-07 | 177 |
classical monocyte | 2.40e-07 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.40e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
testis | 4.89e-19 | 8 |
male reproductive organ | 6.57e-14 | 11 |
gonad | 2.35e-07 | 21 |
indifferent external genitalia | 2.35e-07 | 21 |
indifferent gonad | 2.35e-07 | 21 |
gonad primordium | 2.35e-07 | 21 |
external genitalia | 5.01e-07 | 22 |
male organism | 5.01e-07 | 22 |
male reproductive system | 5.01e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 5.01e-07 | 22 |
germ cell cancer | 5.01e-07 | 22 |