FFCP PHASE1:Hg19::chr17:46703478..46703488,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr17:46703478..46703488,-
|short_description=p9@HOXB9
|description=CAGE_peak_9_at_HOXB9_5end
|association_with_transcript=125bp_to_AK056123_5end
|EntrezGene=3...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3219 | |EntrezGene=3219 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5120 | |HGNC=5120 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=125bp_to_AK056123_5end | |||
|cluster_id=chr17:46703478..46703488,- | |||
|coexpression_cluster_id=C21 | |||
|description=CAGE_peak_9_at_HOXB9_5end | |||
|id=chr17:46703478..46703488,- | |||
|ontology_enrichment_celltype=CL:0000066!1.36e-13!254;CL:0000077!1.58e-07!19 | |||
|ontology_enrichment_celltype_v019=CL:0002554;3.52e-11;2!CL:0002573;7.02e-08;2!CL:0002615;7.02e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002554,3.02e-11,2;CL:0002573,7.76e-08,2;CL:0002615,8.29e-08,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!1.15e-23!239;DOID:162!1.21e-22!235;DOID:0050687!1.13e-19!143;DOID:305!2.94e-16!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0006554!1.27e-11!44;UBERON:0002113!2.49e-11!27;UBERON:0003918!2.49e-11!27;UBERON:0005095!2.49e-11!27;UBERON:0007687!2.49e-11!27;UBERON:0001008!3.09e-11!45;UBERON:0000489!2.87e-10!32;UBERON:0000058!4.72e-09!26;UBERON:0002417!5.35e-08!61;UBERON:0000916!5.35e-08!61;UBERON:0003064!5.85e-07!37;UBERON:0006947!6.01e-07!3;UBERON:0004054!6.01e-07!3;UBERON:0000080!8.44e-07!18;UBERON:0002120!8.44e-07!18;UBERON:0004875!8.44e-07!18;UBERON:0005721!8.44e-07!18;UBERON:0005754!8.44e-07!18;UBERON:0007297!8.44e-07!18;UBERON:0005177!8.56e-07!107 | |||
|ontology_enrichment_uberon_v019=UBERON:0001000;5.71e-21;1!UBERON:0005352;5.71e-21;1!UBERON:0002331;8.92e-19;10!UBERON:0000178;9.44e-13;15!UBERON:0000179;9.44e-13;15!UBERON:0000463;9.44e-13;15!UBERON:0000478;3.37e-08;24!UBERON:0006947;7.02e-08;3!UBERON:0004054;7.02e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001000,6.31e-21,1;UBERON:0005352,6.31e-21,1;UBERON:0002331,8.92e-19,10;UBERON:0000358,8.92e-19,10;UBERON:0000307,8.92e-19,10;UBERON:0000091,8.92e-19,10;UBERON:0000087,8.92e-19,10;UBERON:0007010,8.92e-19,10;UBERON:0007806,8.92e-19,10;UBERON:0008780,8.92e-19,10;UBERON:0005728,8.92e-19,10;UBERON:0000178,9.45e-13,15;UBERON:0000179,9.45e-13,15;UBERON:0000463,9.45e-13,15;UBERON:0000478,3.37e-08,24;UBERON:0006947,7.26e-08,3;UBERON:0004054,7.26e-08,3 | |||
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| ||
|short_description=p9@HOXB9 | |||
}} | }} |
Latest revision as of 07:36, 25 September 2015
Short description: | p9@HOXB9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_HOXB9_5end |
Coexpression cluster: | C21_cord_mycosis_hairy_xeroderma_adult_CD4_anaplastic |
Association with transcript: | 125bp_to_AK056123_5end |
EntrezGene: | HOXB9 |
HGNC: | 5120 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of lymphatic vessel | 3.02e-11 | 2 |
Schwann cell | 7.76e-08 | 2 |
adipocyte of omentum tissue | 8.29e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
vas deferens | 6.31e-21 | 1 |
spermatic cord | 6.31e-21 | 1 |
umbilical cord | 8.92e-19 | 10 |
blastocyst | 8.92e-19 | 10 |
blastula | 8.92e-19 | 10 |
bilaminar disc | 8.92e-19 | 10 |
inner cell mass | 8.92e-19 | 10 |
cleaving embryo | 8.92e-19 | 10 |
connecting stalk | 8.92e-19 | 10 |
inner cell mass derived epiblast | 8.92e-19 | 10 |
extraembryonic mesoderm | 8.92e-19 | 10 |
blood | 9.45e-13 | 15 |
haemolymphatic fluid | 9.45e-13 | 15 |
organism substance | 9.45e-13 | 15 |
extraembryonic structure | 3.37e-08 | 24 |
male genital duct | 7.26e-08 | 3 |
internal male genitalia | 7.26e-08 | 3 |