FFCP PHASE1:Hg19::chr17:48276798..48276821,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:48276798..48276821,- | |||
|coexpression_cluster_id=C59 | |||
|description=CAGE_peak_at_chr17:48276798..48276821,- | |description=CAGE_peak_at_chr17:48276798..48276821,- | ||
|id=chr17:48276798..48276821,- | |id=chr17:48276798..48276821,- | ||
|ontology_enrichment_celltype=CL:0000055!1.01e-35!180;CL:0000057!8.17e-27!75;CL:0000048!2.80e-15!430;CL:0000723!2.29e-14!436;CL:0000034!3.33e-13!444;CL:0000680!4.31e-13!57;CL:0000056!4.31e-13!57;CL:0000355!4.31e-13!57;CL:0000183!8.13e-13!59;CL:0000187!4.25e-12!54;CL:0000393!3.11e-10!60;CL:0000211!3.11e-10!60;CL:0002371!1.35e-09!591;CL:0002320!2.17e-08!365;CL:0002620!2.38e-08!23;CL:0002334!4.74e-08!12;CL:0000144!1.51e-07!625;CL:0000192!1.84e-07!42;CL:0000514!1.84e-07!42;CL:0000499!2.10e-07!27;CL:0000134!6.61e-07!358;CL:0000327!6.92e-07!14 | |ontology_enrichment_celltype=CL:0000055!1.01e-35!180;CL:0000057!8.17e-27!75;CL:0000048!2.80e-15!430;CL:0000723!2.29e-14!436;CL:0000034!3.33e-13!444;CL:0000680!4.31e-13!57;CL:0000056!4.31e-13!57;CL:0000355!4.31e-13!57;CL:0000183!8.13e-13!59;CL:0000187!4.25e-12!54;CL:0000393!3.11e-10!60;CL:0000211!3.11e-10!60;CL:0002371!1.35e-09!591;CL:0002320!2.17e-08!365;CL:0002620!2.38e-08!23;CL:0002334!4.74e-08!12;CL:0000144!1.51e-07!625;CL:0000192!1.84e-07!42;CL:0000514!1.84e-07!42;CL:0000499!2.10e-07!27;CL:0000134!6.61e-07!358;CL:0000327!6.92e-07!14 | ||
|ontology_enrichment_celltype_v019=CL:0000327;4.55e-09;15!CL:0002570;8.39e-09;8!CL:0002334;1.05e-08;12!CL:0000499;1.57e-08;28!CL:0000349;5.32e-08;19!CL:0000057;5.29e-07;73 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.14e-17,76;CL:0000048,2.81e-11,427;CL:0000723,8.45e-11,433;CL:0000034,3.47e-10,441;CL:0002320,4.03e-10,361;CL:0000134,1.39e-09,354;CL:0000327,5.88e-09,15;CL:0002570,7.78e-09,8;CL:0002334,1.06e-08,12;CL:0000499,1.49e-08,28;CL:0000349,4.22e-08,19;CL:0000136,5.31e-08,15;CL:0000219,5.40e-08,386;CL:0002569,9.38e-07,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!3.02e-17!83;UBERON:0002329!3.02e-17!83;UBERON:0003077!3.02e-17!83;UBERON:0003059!3.02e-17!83;UBERON:0007282!3.02e-17!83;UBERON:0009618!3.02e-17!83;UBERON:0007285!3.02e-17!83;UBERON:0004290!3.38e-15!70;UBERON:0001134!1.51e-13!61;UBERON:0002036!1.51e-13!61;UBERON:0003082!1.51e-13!61;UBERON:0002385!1.18e-12!63;UBERON:0001015!1.18e-12!63;UBERON:0000383!1.18e-12!63;UBERON:0000486!3.23e-12!82;UBERON:0005256!9.65e-11!143;UBERON:0002384!1.41e-08!375;UBERON:0001013!1.76e-08!14;UBERON:0002100!1.95e-08!216;UBERON:0002199!2.37e-08!45;UBERON:0002416!2.37e-08!45;UBERON:0003102!1.26e-07!95;UBERON:0003688!5.75e-07!6;UBERON:0002358!5.75e-07!6;UBERON:0003684!5.75e-07!6;UBERON:0001178!5.75e-07!6 | |ontology_enrichment_uberon=UBERON:0000914!3.02e-17!83;UBERON:0002329!3.02e-17!83;UBERON:0003077!3.02e-17!83;UBERON:0003059!3.02e-17!83;UBERON:0007282!3.02e-17!83;UBERON:0009618!3.02e-17!83;UBERON:0007285!3.02e-17!83;UBERON:0004290!3.38e-15!70;UBERON:0001134!1.51e-13!61;UBERON:0002036!1.51e-13!61;UBERON:0003082!1.51e-13!61;UBERON:0002385!1.18e-12!63;UBERON:0001015!1.18e-12!63;UBERON:0000383!1.18e-12!63;UBERON:0000486!3.23e-12!82;UBERON:0005256!9.65e-11!143;UBERON:0002384!1.41e-08!375;UBERON:0001013!1.76e-08!14;UBERON:0002100!1.95e-08!216;UBERON:0002199!2.37e-08!45;UBERON:0002416!2.37e-08!45;UBERON:0003102!1.26e-07!95;UBERON:0003688!5.75e-07!6;UBERON:0002358!5.75e-07!6;UBERON:0003684!5.75e-07!6;UBERON:0001178!5.75e-07!6 | ||
|ontology_enrichment_uberon_v019=UBERON:0004457;5.86e-12;9!UBERON:0000042;5.86e-12;9!UBERON:0003688;1.65e-11;6!UBERON:0002358;1.65e-11;6!UBERON:0003684;1.65e-11;6!UBERON:0001178;1.65e-11;6!UBERON:0001013;7.79e-10;14!UBERON:0003104;2.70e-08;7!UBERON:0009142;2.70e-08;7!UBERON:0000478;4.20e-07;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,2.17e-11,6;UBERON:0002358,2.17e-11,6;UBERON:0003684,2.17e-11,6;UBERON:0001178,2.17e-11,6;UBERON:0001013,6.20e-10,14;UBERON:0002384,6.79e-10,371;UBERON:0004457,1.64e-08,12;UBERON:0000042,1.64e-08,12;UBERON:0000478,3.54e-07,24;UBERON:0003422,9.38e-07,6 | |||
|phase1_expression=2.54349730978779,2.78330681058278,2.39622486963151,8.00586386825043,6.25745532198203,1.74467704820074,5.06599756336621,0.631719873426831,0.261185628199839,0,0,0.218441372130172,2.37390280405608,0.495065411840187,0.331397375727916,0.672325146451775,0,0.730310090387373,0,0.61560529038394,1.22400414746552,0.626909442956176,0,0,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0,2.43806866313962,0.670700859703636,0.255725123687061,0.722878304769133,1.00267582127178,1.59331170856906,3.1811437882044,2.43317435151318,0.0945348171640679,0.443458794925128,0.614843499851882,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,7.9515512271251,1.8994576749687,0.132409180813219,6.59724227722272,2.4826786753885,0.560677600142307,2.1349799145941,3.45334567784024,0,1.21239604862719,0.490385709340376,1.21085942115945,1.15235184896,0.70296429550139,0.624320153660641,0,0.149448680551801,0.117434498643765,0.161872944368132,0,0.204154171254893,0.122834317311768,0.309977343527296,8.31602000097437,4.69807165629258,0.910161361938026,2.15585442544872,0.168336113954066,0.125118519871964,0.277064115484183,1.75591048352335,1.5324389789951,6.46023653298366,0.340296549480063,0.89694817844431,3.20336083227851,1.27159140695737,1.80054657650641,0.618315175430633,1.03056216018252,0.558350568994769,1.85653965465393,1.65642908774038,0.504867548488229,0.828449087780694,0.969876340912871,3.19508633264953,0.503760491138201,0.169560592310488,0,0,0,0,0,0,0,0,0,3.12899064659632,0.643240938192885,1.38134921352481,0,0.721879481669586,0,0,0,0,0,0,0.134831308160164,0,0,0,1.40241773803446,2.057870056657,2.94017422771084,0,0,0,0,0,0.343135620597051,0,0,0,0,0.325808305310325,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0.308482478109971,0,0,0.448524337381443,2.1798003441664,0.07333828582095,1.55126058909333,3.57656445851882,2.535908257668,1.59562869950922,2.08014873822732,0,0,0.799266537048298,1.57275793023962,3.7983512377401,0.823240336780769,0,1.77695974371273,1.58390374586686,0.301439377059586,0,0.099972991182057,0,0,0,1.67737398844108,3.44585807502342,1.42636905040718,0.579125226670317,0.61642896765115,0.179060963239896,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0.12269149171914,0.500170521059677,0.542530047399471,9.15071790735551,6.60187258549499,3.6271555457805,1.99140405487612,8.12554469264841,4.5481500811197,2.0694614258501,0,2.76553752812555,0.521301686808497,2.34961388955289,5.49029478097369,0,0,0,0,1.66435439510497,2.41912234663744,2.97729369382532,2.14846762603287,6.45518217196069,4.10045277618243,3.07024349440022,7.39928037260594,7.42090332224955,0.154209693802656,1.59805552781814,0.492762936082855,0,0.813472649219715,0,0,0.0920809889358963,0.803701137152247,0.728364672026868,1.96686622439136,0,0,0,0,0,0,0,0,1.54227252690289,0,0.501689773854853,0,0,0,0,0,0,0,0,0.309123034943167,0.183138929636687,0.330037999682352,0.574265537996172,0,0,0.386682873168488,0.308097234229289,0.614014698904518,0.275673144969061,0.751941714077915,1.74020032697074,0.340906509664404,1.69160867728801,0,0,0,0.2023155617111,0.464845549297286,1.88887408098384,0.6970372701606,0.924100740528266,0,0,0.37064843820784,0.429374660225974,0,1.58189712359363,1.90630193923825,0.255897791311334,0.42793898803392,0,0,0.359744915166629,1.92175920815238,2.12062324222236,0.606547444719948,1.58510321173008,0,0,0.243713489631284,0,1.63799893689583,1.55545975149084,0,0.551365343546124,0.66343897524122,0,0,1.31178950409327,0.405820753925408,1.239293992399,1.40847801266121,0.143411352204052,0.589494246078727,0.7133421029625,0.354761064070598,1.26664581178598,1.97576935775941,0.379473173765715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0.276283915531148,0,0,0,2.79935628895627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.923403102045565,0.113942055847001,0,0,0,0,1.64875668123352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,1.83309043480088,0,0,0,0.067401132980677,4.81546588379273,0,0,0,0,0,1.20990716048664,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0.873633341210151,0,0,0,0.0821154570532092,0,0,1.58186518546373,0,0,0,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28929632425987,0,0.279282401272254,0,0,0,0,0,0.268733889946905,2.16179930125442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0.25426853765475,0,0.864221491201268,0.653174720218818,0,0,0.511164065356265,0,0,0,0,0,0,0,0,0.157204305099666,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19403842309499,1.8697064787778,1.10961172300523,0.757612021100357,0.50313580350515,0,0.228840068396924,0.907385542579434,0.777186002913902,0.147855149989634,0.477890301491107,0,0,1.24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| ||
|short_description=p@chr17:48276798..48276821,- | |short_description=p@chr17:48276798..48276821,- | ||
}} | }} |
Latest revision as of 18:38, 25 July 2015
Short description: | p@chr17:48276798..48276821, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:48276798..48276821, - |
Coexpression cluster: | C59_Smooth_Fibroblast_Mesenchymal_tenocyte_Ewing_skin_hepatic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.14e-17 | 76 |
multi fate stem cell | 2.81e-11 | 427 |
somatic stem cell | 8.45e-11 | 433 |
stem cell | 3.47e-10 | 441 |
connective tissue cell | 4.03e-10 | 361 |
mesenchymal cell | 1.39e-09 | 354 |
extracellular matrix secreting cell | 5.88e-09 | 15 |
mesenchymal stem cell of adipose | 7.78e-09 | 8 |
preadipocyte | 1.06e-08 | 12 |
stromal cell | 1.49e-08 | 28 |
extraembryonic cell | 4.22e-08 | 19 |
fat cell | 5.31e-08 | 15 |
motile cell | 5.40e-08 | 386 |
mesenchymal stem cell of umbilical cord | 9.38e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
omentum | 2.17e-11 | 6 |
peritoneum | 2.17e-11 | 6 |
abdominal cavity | 2.17e-11 | 6 |
visceral peritoneum | 2.17e-11 | 6 |
adipose tissue | 6.20e-10 | 14 |
connective tissue | 6.79e-10 | 371 |
cavity lining | 1.64e-08 | 12 |
serous membrane | 1.64e-08 | 12 |
extraembryonic structure | 3.54e-07 | 24 |
mesenchyme of umbilical cord | 9.38e-07 | 6 |