FFCP PHASE1:Hg19::chr18:29175095..29175110,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr18:29175095..29175110,+ | |||
|coexpression_cluster_id=C160 | |||
|description=CAGE_peak_at_chr18:29175095..29175110,+ | |description=CAGE_peak_at_chr18:29175095..29175110,+ | ||
|id=chr18:29175095..29175110,+ | |id=chr18:29175095..29175110,+ | ||
|ontology_enrichment_celltype=CL:0000181!1.61e-10!12;CL:0000417!1.61e-10!12;CL:0000668!1.61e-10!12;CL:0000414!1.61e-10!12;CL:0000412!1.61e-10!12;CL:0000182!1.61e-10!12 | |ontology_enrichment_celltype=CL:0000181!1.61e-10!12;CL:0000417!1.61e-10!12;CL:0000668!1.61e-10!12;CL:0000414!1.61e-10!12;CL:0000412!1.61e-10!12;CL:0000182!1.61e-10!12 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001896!2.09e-24!3;UBERON:0005290!2.09e-24!3;UBERON:0010096!2.09e-24!3;UBERON:0001894!1.25e-17!7;UBERON:0006222!1.25e-17!7;UBERON:0001905!2.37e-16!2;UBERON:0002757!2.37e-16!2;UBERON:0010134!2.37e-16!2;UBERON:0002784!2.37e-16!2;UBERON:0005408!2.37e-16!2;UBERON:0001899!2.37e-16!2;UBERON:0005743!1.34e-14!86;UBERON:0002107!2.80e-14!19;UBERON:0006925!2.80e-14!19;UBERON:0008836!2.80e-14!19;UBERON:0001049!3.90e-14!57;UBERON:0005068!3.90e-14!57;UBERON:0006241!3.90e-14!57;UBERON:0007135!3.90e-14!57;UBERON:0001017!3.76e-13!82;UBERON:0002368!4.33e-13!35;UBERON:0000073!5.24e-13!94;UBERON:0001016!5.24e-13!94;UBERON:0003075!1.33e-12!86;UBERON:0007284!1.33e-12!86;UBERON:0007023!2.56e-12!115;UBERON:0008835!2.88e-12!22;UBERON:0003894!2.88e-12!22;UBERON:0002346!6.02e-12!90;UBERON:0009854!1.03e-11!23;UBERON:0000955!2.89e-11!69;UBERON:0006238!2.89e-11!69;UBERON:0002616!3.26e-11!59;UBERON:0007499!9.76e-11!25;UBERON:0009497!9.76e-11!25;UBERON:0000015!9.76e-11!25;UBERON:0002423!9.76e-11!25;UBERON:0006235!9.76e-11!25;UBERON:0004161!9.76e-11!25;UBERON:0005057!2.64e-10!26;UBERON:0009856!2.64e-10!26;UBERON:0000949!6.09e-10!45;UBERON:0002298!1.70e-09!8;UBERON:0002530!3.07e-09!59;UBERON:0002336!4.54e-09!1;UBERON:0001018!4.54e-09!1;UBERON:0002473!4.54e-09!1;UBERON:0005340!4.54e-09!1;UBERON:0002316!4.54e-09!1;UBERON:0003544!4.54e-09!1;UBERON:0001020!4.54e-09!1;UBERON:0005970!4.54e-09!1;UBERON:0002437!4.54e-09!1;UBERON:0003296!1.25e-08!4;UBERON:0010133!1.25e-08!4;UBERON:0002365!1.46e-08!31;UBERON:0002330!1.46e-08!31;UBERON:0003076!1.54e-08!15;UBERON:0003057!1.54e-08!15;UBERON:0000025!2.83e-08!194;UBERON:0002780!4.05e-08!41;UBERON:0001890!4.05e-08!41;UBERON:0006240!4.05e-08!41;UBERON:0003929!4.41e-08!54;UBERON:0003080!6.53e-08!42;UBERON:0000483!3.18e-07!309;UBERON:0000119!4.06e-07!312;UBERON:0004111!5.48e-07!241;UBERON:0003056!8.12e-07!61;UBERON:0000033!8.86e-07!123 | |ontology_enrichment_uberon=UBERON:0001896!2.09e-24!3;UBERON:0005290!2.09e-24!3;UBERON:0010096!2.09e-24!3;UBERON:0001894!1.25e-17!7;UBERON:0006222!1.25e-17!7;UBERON:0001905!2.37e-16!2;UBERON:0002757!2.37e-16!2;UBERON:0010134!2.37e-16!2;UBERON:0002784!2.37e-16!2;UBERON:0005408!2.37e-16!2;UBERON:0001899!2.37e-16!2;UBERON:0005743!1.34e-14!86;UBERON:0002107!2.80e-14!19;UBERON:0006925!2.80e-14!19;UBERON:0008836!2.80e-14!19;UBERON:0001049!3.90e-14!57;UBERON:0005068!3.90e-14!57;UBERON:0006241!3.90e-14!57;UBERON:0007135!3.90e-14!57;UBERON:0001017!3.76e-13!82;UBERON:0002368!4.33e-13!35;UBERON:0000073!5.24e-13!94;UBERON:0001016!5.24e-13!94;UBERON:0003075!1.33e-12!86;UBERON:0007284!1.33e-12!86;UBERON:0007023!2.56e-12!115;UBERON:0008835!2.88e-12!22;UBERON:0003894!2.88e-12!22;UBERON:0002346!6.02e-12!90;UBERON:0009854!1.03e-11!23;UBERON:0000955!2.89e-11!69;UBERON:0006238!2.89e-11!69;UBERON:0002616!3.26e-11!59;UBERON:0007499!9.76e-11!25;UBERON:0009497!9.76e-11!25;UBERON:0000015!9.76e-11!25;UBERON:0002423!9.76e-11!25;UBERON:0006235!9.76e-11!25;UBERON:0004161!9.76e-11!25;UBERON:0005057!2.64e-10!26;UBERON:0009856!2.64e-10!26;UBERON:0000949!6.09e-10!45;UBERON:0002298!1.70e-09!8;UBERON:0002530!3.07e-09!59;UBERON:0002336!4.54e-09!1;UBERON:0001018!4.54e-09!1;UBERON:0002473!4.54e-09!1;UBERON:0005340!4.54e-09!1;UBERON:0002316!4.54e-09!1;UBERON:0003544!4.54e-09!1;UBERON:0001020!4.54e-09!1;UBERON:0005970!4.54e-09!1;UBERON:0002437!4.54e-09!1;UBERON:0003296!1.25e-08!4;UBERON:0010133!1.25e-08!4;UBERON:0002365!1.46e-08!31;UBERON:0002330!1.46e-08!31;UBERON:0003076!1.54e-08!15;UBERON:0003057!1.54e-08!15;UBERON:0000025!2.83e-08!194;UBERON:0002780!4.05e-08!41;UBERON:0001890!4.05e-08!41;UBERON:0006240!4.05e-08!41;UBERON:0003929!4.41e-08!54;UBERON:0003080!6.53e-08!42;UBERON:0000483!3.18e-07!309;UBERON:0000119!4.06e-07!312;UBERON:0004111!5.48e-07!241;UBERON:0003056!8.12e-07!61;UBERON:0000033!8.86e-07!123 | ||
|ontology_enrichment_uberon_v019=UBERON:0001896;2.25e-20;3!UBERON:0005290;2.25e-20;3!UBERON:0002336;2.38e-15;1!UBERON:0011215;2.38e-15;1!UBERON:0001018;2.38e-15;1!UBERON:0002473;2.38e-15;1!UBERON:0005340;2.38e-15;1!UBERON:0003544;2.38e-15;1!UBERON:0005970;2.38e-15;1!UBERON:0002316;2.38e-15;1!UBERON:0001020;2.38e-15;1!UBERON:0002437;2.38e-15;1!UBERON:0002107;2.38e-12;19!UBERON:0006925;2.38e-12;19!UBERON:0002298;1.12e-10;6!UBERON:0002423;1.89e-09;25!UBERON:0002368;2.78e-09;33!UBERON:0002360;1.67e-08;2!UBERON:0000094;1.67e-08;2!UBERON:0010743;1.67e-08;2!UBERON:0001905;2.48e-08;2!UBERON:0001954;2.48e-08;2!UBERON:0005162;2.48e-08;2!UBERON:0000122;2.48e-08;2!UBERON:0002757;2.48e-08;2!UBERON:0010134;2.48e-08;2!UBERON:0003022;2.48e-08;2!UBERON:0005408;2.48e-08;2!UBERON:0002421;2.48e-08;2!UBERON:0001899;2.48e-08;2!UBERON:0002600;2.48e-08;2!UBERON:0000949;9.35e-08;43!UBERON:0002365;1.33e-07;31!UBERON:0002330;1.33e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001896,2.25e-20,3;UBERON:0005290,2.25e-20,3;UBERON:0010096,2.25e-20,3;UBERON:0002336,3.66e-15,1;UBERON:0011215,3.66e-15,1;UBERON:0001018,3.66e-15,1;UBERON:0002473,3.66e-15,1;UBERON:0005340,3.66e-15,1;UBERON:0003544,3.66e-15,1;UBERON:0005970,3.66e-15,1;UBERON:0002316,3.66e-15,1;UBERON:0001020,3.66e-15,1;UBERON:0002437,3.66e-15,1;UBERON:0002107,2.31e-12,19;UBERON:0006925,2.31e-12,19;UBERON:0008836,2.31e-12,19;UBERON:0008835,1.03e-10,22;UBERON:0003894,1.03e-10,22;UBERON:0002298,1.12e-10,6;UBERON:0009854,2.93e-10,23;UBERON:0002368,3.59e-10,35;UBERON:0007499,1.85e-09,25;UBERON:0009497,1.85e-09,25;UBERON:0000015,1.85e-09,25;UBERON:0002423,1.85e-09,25;UBERON:0006235,1.85e-09,25;UBERON:0004161,1.85e-09,25;UBERON:0007023,3.78e-09,114;UBERON:0009856,4.19e-09,26;UBERON:0002360,1.86e-08,2;UBERON:0000094,1.86e-08,2;UBERON:0010743,1.86e-08,2;UBERON:0001954,2.31e-08,2;UBERON:0003022,2.31e-08,2;UBERON:0002421,2.31e-08,2;UBERON:0002600,2.31e-08,2;UBERON:0001905,2.87e-08,2;UBERON:0002757,2.87e-08,2;UBERON:0010134,2.87e-08,2;UBERON:0005408,2.87e-08,2;UBERON:0001899,2.87e-08,2;UBERON:0005162,3.08e-08,2;UBERON:0000122,3.08e-08,2;UBERON:0000949,6.71e-08,45;UBERON:0001017,7.30e-08,81;UBERON:0002365,1.14e-07,31;UBERON:0002330,1.14e-07,31;UBERON:0001016,4.87e-07,89;UBERON:0000955,5.21e-07,68;UBERON:0006238,5.21e-07,68 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.1404027857465,0,2.95394953340702,0,0.860919069801795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.362578348774867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.95777922130672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.91845782408015,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.93866549219044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.19385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28062152663286,0,0.702793337176017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451961481561065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0,0.0674035438541849,0,0,0,1.77064427945048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75862680413699,2.65013777824443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,41.8588712853752,7.98689171065336,0.496771223531068,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.535701835878287,1.3451348888753,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50100742770978,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.297046400327086,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.1404027857465,0,2.95394953340702,0,0.860919069801795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.362578348774867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.95777922130672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.91845782408015,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.93866549219044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.19385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28062152663286,0,0.702793337176017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451961481561065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0,0.0674035438541849,0,0,0,1.77064427945048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75862680413699,2.65013777824443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,41.8588712853752,7.98689171065336,0.496771223531068,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.535701835878287,1.3451348888753,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50100742770978,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.297046400327086,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr18:29175095..29175110,+ | |short_description=p@chr18:29175095..29175110,+ | ||
}} | }} |
Latest revision as of 00:21, 26 July 2015
Short description: | p@chr18:29175095..29175110, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr18:29175095..29175110, + |
Coexpression cluster: | C160_medulla_Hepatocyte_retina_corpus_liver_pineal_cerebral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data