FFCP PHASE1:Hg19::chr18:33058547..33058592,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr18:33058547..33058592,- | |||
|coexpression_cluster_id=C2458 | |||
|description=CAGE_peak_at_chr18:33058547..33058592,- | |description=CAGE_peak_at_chr18:33058547..33058592,- | ||
|id=chr18:33058547..33058592,- | |id=chr18:33058547..33058592,- | ||
|ontology_enrichment_celltype=CL:0000548!7.81e-20!679;CL:0000004!7.81e-20!679;CL:0000255!7.81e-20!679;CL:0000012!8.18e-20!682;CL:0000066!1.09e-19!254;CL:0000063!1.36e-17!578;CL:0002371!1.04e-14!591;CL:0000144!1.22e-12!625;CL:0002057!1.89e-12!42;CL:0000860!2.81e-12!45;CL:0000003!5.26e-12!722;CL:0000220!1.30e-09!246;CL:0002321!3.35e-09!248;CL:0002076!1.23e-08!43;CL:0002009!1.46e-08!65;CL:0002194!2.71e-08!63;CL:0000576!2.71e-08!63;CL:0000040!2.71e-08!63;CL:0000559!2.71e-08!63;CL:0002368!2.93e-08!13;CL:0000223!8.05e-08!59;CL:0000766!9.09e-07!76;CL:0000557!9.77e-07!71 | |ontology_enrichment_celltype=CL:0000548!7.81e-20!679;CL:0000004!7.81e-20!679;CL:0000255!7.81e-20!679;CL:0000012!8.18e-20!682;CL:0000066!1.09e-19!254;CL:0000063!1.36e-17!578;CL:0002371!1.04e-14!591;CL:0000144!1.22e-12!625;CL:0002057!1.89e-12!42;CL:0000860!2.81e-12!45;CL:0000003!5.26e-12!722;CL:0000220!1.30e-09!246;CL:0002321!3.35e-09!248;CL:0002076!1.23e-08!43;CL:0002009!1.46e-08!65;CL:0002194!2.71e-08!63;CL:0000576!2.71e-08!63;CL:0000040!2.71e-08!63;CL:0000559!2.71e-08!63;CL:0002368!2.93e-08!13;CL:0000223!8.05e-08!59;CL:0000766!9.09e-07!76;CL:0000557!9.77e-07!71 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.61e-13;33!CL:0002057;1.61e-13;33!CL:0002368;5.27e-11;13!CL:0000473;1.47e-10;39!CL:0000234;1.47e-10;39!CL:0002202;2.00e-08;9!CL:0002632;2.00e-08;9!CL:0002076;3.64e-07;42!CL:1000497;8.97e-07;17!CL:0002518;8.97e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.04e-21,253;CL:0000860,3.84e-13,42;CL:0002057,3.84e-13,42;CL:0000473,1.30e-12,48;CL:0000234,1.30e-12,48;CL:0002368,4.23e-11,13;CL:0002076,1.29e-08,42;CL:0002202,1.77e-08,9;CL:0002632,1.77e-08,9;CL:0002194,4.85e-08,59;CL:0000576,4.85e-08,59;CL:0000040,4.85e-08,59;CL:0000559,4.85e-08,59;CL:0000223,1.35e-07,58;CL:0002009,1.77e-07,61;CL:0000766,2.46e-07,72;CL:1000497,9.45e-07,17;CL:0002518,9.45e-07,17 | |||
|ontology_enrichment_development_v019=CL:0002057;2.39e-10;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002050!1.26e-09!605;UBERON:0005423!1.26e-09!605;UBERON:0000923!1.53e-09!604;UBERON:0005291!1.53e-09!604;UBERON:0006598!1.53e-09!604;UBERON:0002532!1.53e-09!604;UBERON:0000467!4.72e-09!625;UBERON:0000480!6.86e-09!626;UBERON:0000926!7.35e-09!448;UBERON:0004120!7.35e-09!448;UBERON:0006603!7.35e-09!448;UBERON:0000922!1.73e-08!612;UBERON:0002371!7.52e-08!80;UBERON:0000468!4.34e-07!659;UBERON:0004765!5.34e-07!101;UBERON:0001434!5.34e-07!101 | |ontology_enrichment_uberon=UBERON:0002050!1.26e-09!605;UBERON:0005423!1.26e-09!605;UBERON:0000923!1.53e-09!604;UBERON:0005291!1.53e-09!604;UBERON:0006598!1.53e-09!604;UBERON:0002532!1.53e-09!604;UBERON:0000467!4.72e-09!625;UBERON:0000480!6.86e-09!626;UBERON:0000926!7.35e-09!448;UBERON:0004120!7.35e-09!448;UBERON:0006603!7.35e-09!448;UBERON:0000922!1.73e-08!612;UBERON:0002371!7.52e-08!80;UBERON:0000468!4.34e-07!659;UBERON:0004765!5.34e-07!101;UBERON:0001434!5.34e-07!101 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005423,1.04e-10,581;UBERON:0000922,1.32e-10,592;UBERON:0002050,3.64e-08,564;UBERON:0002371,2.41e-07,76;UBERON:0000923,2.89e-07,560;UBERON:0010316,2.89e-07,560;UBERON:0005291,2.89e-07,560;UBERON:0006598,2.89e-07,560;UBERON:0010317,2.89e-07,560;UBERON:0002532,2.89e-07,560 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0,0,0,0.872338524100369,0,0.631719873426831,0,1.22866968250754,3.48900583986214,7.64544802455603,5.80287352102598,0,0,0,0,0,0,0.369363174230364,0,0,0.572471974262113,1.64249310087461,1.38096903554283,0.382067028739756,0.328402357799783,0.550975469195755,5.90046415273356,9.59573495243032,8.05043841243595,10.1136334692682,10.5422071572388,17.7481924880058,0.0774672005803016,0,0,12.1878989877013,9.22504458362652,12.8036413722353,0,0,0,1.45398238779565,2.26725566213286,0.970336244751265,3.25400651667958,3.28934310417461,4.02618282163635,4.89077066947656,7.42866048934392,8.74984250587765,14.8240642716746,9.68227025375739,25.7310324529249,3.20011977222428,0.818718450173537,2.47195832889593,10.7129362329816,12.1953030288916,3.83602275479425,0.659702600373432,1.79517291859469,0.852449501065388,17.412554317715,9.64554881974938,9.34233373493363,6.78371396193207,7.30076085788282,11.9453864587814,13.9241885605675,22.4649357952414,37.0260993305835,0,0.212604299965044,0,0.112328631146495,0.150176892841506,0.32145117339416,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,2.80254281490768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0843174571537,0,0.724232594804119,1.5905718941022,0.973269740605272,5.67208902984407,9.09090529596512,11.857696068572,0.0654895377488563,13.8432209551166,11.1235332835329,0.324547393654683,0.174129737299267,0.531831842075461,0.715471872916026,0,0,2.78267370313387,2.58070378531837,1.04142150482278,1.13061588384802,0.838998872419812,0.550236083880135,0.626984899610432,0.516833518338658,0.35576626268671,0.33472061276467,5.23678112241891,2.28081631715554,0.488124115096339,1.47065232138347,0,1.42879565254528,1.57170560838319,2.59006405111641,3.06633274931766,10.4419222552494,6.59526278149466,0,0,17.8798561378439,0.496971951695318,0.633152558322899,1.19168262731897,0,0,0,1.06748995729705,0.74000264525148,0,1.48181739276657,0.817309515567294,0.908144565869588,0,1.87457145467037,2.49728061464256,2.85235910772225,4.03511437489863,12.0957533603078,9.06488488461537,7.72479436862367,2.04154171254893,2.94802361548243,0.516628905878827,0,0.989067717114227,0.910161361938026,0,4.88174730466792,3.1279629967991,7.20366700258876,0.438977620880838,0.919463387397059,0,0.567160915800105,0.179389635688862,0,0,0,0,0,0,0.675105328965065,0,0,0,0.161646056818812,0,0.10075209822764,0,17.3934767846967,14.4555443913142,10.0381608386151,0,0,0,0,0,0,0,0,0,0,0,1.65629520055781,2.36018566109342,2.16909926895134,2.53676137284506,2.83243277320128,2.84724742933316,2.56179485504312,2.5508790466295,3.8474715694639,0.738155454624648,1.40241773803446,0,1.47008711385542,0,0,0,0,0.983907508344908,6.00487336044839,20.7428039422302,25.8524032492525,31.1639814476056,16.3881547930597,0,1.03993478527958,7.21656710126366,6.14431146367907,2.23076519048061,0.288732895522148,0.925971025153221,0,0,0,0,1.63802985597466,1.63494278517601,4.68669169933885,23.0135515632438,15.5952606966625,15.1353903367814,22.669447204089,12.651628412452,0,0,0.207328115540772,0,0,0.190493682876507,0.381988425558278,0,0,0,0,0,5.04589879554123,0,5.35369486492935,0,0,0.845302752556,0,0,6.68739173081569,2.83698264046557,1.8649552531127,0,0,0.823240336780769,2.60588947434988,0,0,2.1100756394171,0,0.799783929456456,1.2162378064119,0,0,2.63587341040741,0,1.42636905040718,0.434343920002738,0.821905290201534,0.716243852959582,0,0.591092280605782,0.431255149719035,0.513372145118994,0,0,0,0,0,0,0,1.24324654030811,0,0,0.271265023699736,0.415941723061614,0.535286966391485,0.630809660135739,0.585707074963566,0.300946099727719,0,0,1.32845119707087,0.921845842708516,0.260650843404249,0.195801157462741,2.40200396667599,0,0.862856803274467,2.34800627167578,0,0,0,0.496215615637554,1.99500565274481,0.561320188866147,0.256278298511402,0.511707249066704,0.160853921143607,1.48418066444991,0.308419387605311,0.355123450626254,0.164254312027618,1.03850885836724,0,0.483437798366489,8.22076528243468,4.78821142466661,0,0,0,10.8287907097779,11.6293159027666,3.92174884588428,1.46139224653261,3.0609972378934,0,8.33459155854927,0.647747748306418,0,0.812839312631559,2.00675909541941,14.5279475635672,8.31076008928724,5.82074362277664,0,0,9.4886546293064,2.29610251989794,0,0,0,0,5.16838984196555,3.90036147621913,0,0.193341436584244,0.462145851343933,1.38153307253517,3.99726060205139,0.214840489736547,0.290033387828457,1.36362603865761,0.445160178233687,5.45440220691228,3.45942121257191,43.5159349606532,1.4162089319777,0,0.31481234683064,0,0,1.06461206063404,0.869932992075073,0.74129687641568,0.143124886741991,1.48863347743867,3.16379424718726,0.762520775695299,1.79128453917934,0,0,0,0.179872457583315,0.274537029736055,0.589062011728432,0.404364963146632,0,0,0.48763373908959,1.21856744815642,0,0.409499734223957,0,0,0,0.66343897524122,1.31535265576129,1.15755106853338,0,0.405820753925408,0.6196469961995,0.563391205064483,2.43799298746888,0.589494246078727,0.35667105148125,4.61189383291777,0.211107635297664,0.3292948929599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|phase1_expression=0.181678379270557,0.214100523890983,0,0,0,0.872338524100369,0,0.631719873426831,0,1.22866968250754,3.48900583986214,7.64544802455603,5.80287352102598,0,0,0,0,0,0,0.369363174230364,0,0,0.572471974262113,1.64249310087461,1.38096903554283,0.382067028739756,0.328402357799783,0.550975469195755,5.90046415273356,9.59573495243032,8.05043841243595,10.1136334692682,10.5422071572388,17.7481924880058,0.0774672005803016,0,0,12.1878989877013,9.22504458362652,12.8036413722353,0,0,0,1.45398238779565,2.26725566213286,0.970336244751265,3.25400651667958,3.28934310417461,4.02618282163635,4.89077066947656,7.42866048934392,8.74984250587765,14.8240642716746,9.68227025375739,25.7310324529249,3.20011977222428,0.818718450173537,2.47195832889593,10.7129362329816,12.1953030288916,3.83602275479425,0.659702600373432,1.79517291859469,0.852449501065388,17.412554317715,9.64554881974938,9.34233373493363,6.78371396193207,7.30076085788282,11.9453864587814,13.9241885605675,22.4649357952414,37.0260993305835,0,0.212604299965044,0,0.112328631146495,0.150176892841506,0.32145117339416,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,2.80254281490768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0843174571537,0,0.724232594804119,1.5905718941022,0.973269740605272,5.67208902984407,9.09090529596512,11.857696068572,0.0654895377488563,13.8432209551166,11.1235332835329,0.324547393654683,0.174129737299267,0.531831842075461,0.715471872916026,0,0,2.78267370313387,2.58070378531837,1.04142150482278,1.13061588384802,0.838998872419812,0.550236083880135,0.626984899610432,0.516833518338658,0.35576626268671,0.33472061276467,5.23678112241891,2.28081631715554,0.488124115096339,1.47065232138347,0,1.42879565254528,1.57170560838319,2.59006405111641,3.06633274931766,10.4419222552494,6.59526278149466,0,0,17.8798561378439,0.496971951695318,0.633152558322899,1.19168262731897,0,0,0,1.06748995729705,0.74000264525148,0,1.48181739276657,0.817309515567294,0.908144565869588,0,1.87457145467037,2.49728061464256,2.85235910772225,4.03511437489863,12.0957533603078,9.06488488461537,7.72479436862367,2.04154171254893,2.94802361548243,0.516628905878827,0,0.989067717114227,0.910161361938026,0,4.88174730466792,3.1279629967991,7.20366700258876,0.438977620880838,0.919463387397059,0,0.567160915800105,0.179389635688862,0,0,0,0,0,0,0.675105328965065,0,0,0,0.161646056818812,0,0.10075209822764,0,17.3934767846967,14.4555443913142,10.0381608386151,0,0,0,0,0,0,0,0,0,0,0,1.65629520055781,2.36018566109342,2.16909926895134,2.53676137284506,2.83243277320128,2.84724742933316,2.56179485504312,2.5508790466295,3.8474715694639,0.738155454624648,1.40241773803446,0,1.47008711385542,0,0,0,0,0.983907508344908,6.00487336044839,20.7428039422302,25.8524032492525,31.1639814476056,16.3881547930597,0,1.03993478527958,7.21656710126366,6.14431146367907,2.23076519048061,0.288732895522148,0.925971025153221,0,0,0,0,1.63802985597466,1.63494278517601,4.68669169933885,23.0135515632438,15.5952606966625,15.1353903367814,22.669447204089,12.651628412452,0,0,0.207328115540772,0,0,0.190493682876507,0.381988425558278,0,0,0,0,0,5.04589879554123,0,5.35369486492935,0,0,0.845302752556,0,0,6.68739173081569,2.83698264046557,1.8649552531127,0,0,0.823240336780769,2.60588947434988,0,0,2.1100756394171,0,0.799783929456456,1.2162378064119,0,0,2.63587341040741,0,1.42636905040718,0.434343920002738,0.821905290201534,0.716243852959582,0,0.591092280605782,0.431255149719035,0.513372145118994,0,0,0,0,0,0,0,1.24324654030811,0,0,0.271265023699736,0.415941723061614,0.535286966391485,0.630809660135739,0.585707074963566,0.300946099727719,0,0,1.32845119707087,0.921845842708516,0.260650843404249,0.195801157462741,2.40200396667599,0,0.862856803274467,2.34800627167578,0,0,0,0.496215615637554,1.99500565274481,0.561320188866147,0.256278298511402,0.511707249066704,0.160853921143607,1.48418066444991,0.308419387605311,0.355123450626254,0.164254312027618,1.03850885836724,0,0.483437798366489,8.22076528243468,4.78821142466661,0,0,0,10.8287907097779,11.6293159027666,3.92174884588428,1.46139224653261,3.0609972378934,0,8.33459155854927,0.647747748306418,0,0.812839312631559,2.00675909541941,14.5279475635672,8.31076008928724,5.82074362277664,0,0,9.4886546293064,2.29610251989794,0,0,0,0,5.16838984196555,3.90036147621913,0,0.193341436584244,0.462145851343933,1.38153307253517,3.99726060205139,0.214840489736547,0.290033387828457,1.36362603865761,0.445160178233687,5.45440220691228,3.45942121257191,43.5159349606532,1.4162089319777,0,0.31481234683064,0,0,1.06461206063404,0.869932992075073,0.74129687641568,0.143124886741991,1.48863347743867,3.16379424718726,0.762520775695299,1.79128453917934,0,0,0,0.179872457583315,0.274537029736055,0.589062011728432,0.404364963146632,0,0,0.48763373908959,1.21856744815642,0,0.409499734223957,0,0,0,0.66343897524122,1.31535265576129,1.15755106853338,0,0.405820753925408,0.6196469961995,0.563391205064483,2.43799298746888,0.589494246078727,0.35667105148125,4.61189383291777,0.211107635297664,0.3292948929599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| ||
|short_description=p@chr18:33058547..33058592,- | |short_description=p@chr18:33058547..33058592,- | ||
}} | }} |
Latest revision as of 00:36, 26 July 2015
Short description: | p@chr18:33058547..33058592, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr18:33058547..33058592, - |
Coexpression cluster: | C2458_Small_Keratinocyte_CD14_Urothelial_nasal_Mammary_Mallassezderived |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.04e-21 | 253 |
classical monocyte | 3.84e-13 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.84e-13 | 42 |
defensive cell | 1.30e-12 | 48 |
phagocyte | 1.30e-12 | 48 |
respiratory epithelial cell | 4.23e-11 | 13 |
endo-epithelial cell | 1.29e-08 | 42 |
epithelial cell of tracheobronchial tree | 1.77e-08 | 9 |
epithelial cell of lower respiratory tract | 1.77e-08 | 9 |
monopoietic cell | 4.85e-08 | 59 |
monocyte | 4.85e-08 | 59 |
monoblast | 4.85e-08 | 59 |
promonocyte | 4.85e-08 | 59 |
endodermal cell | 1.35e-07 | 58 |
macrophage dendritic cell progenitor | 1.77e-07 | 61 |
myeloid leukocyte | 2.46e-07 | 72 |
kidney cell | 9.45e-07 | 17 |
kidney epithelial cell | 9.45e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
developing anatomical structure | 1.04e-10 | 581 |
embryo | 1.32e-10 | 592 |
embryonic structure | 3.64e-08 | 564 |
bone marrow | 2.41e-07 | 76 |
germ layer | 2.89e-07 | 560 |
germ layer / neural crest | 2.89e-07 | 560 |
embryonic tissue | 2.89e-07 | 560 |
presumptive structure | 2.89e-07 | 560 |
germ layer / neural crest derived structure | 2.89e-07 | 560 |
epiblast (generic) | 2.89e-07 | 560 |