FFCP PHASE1:Hg19::chr1:1142184..1142194,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8784 | |EntrezGene=8784 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11914 | |HGNC=11914 | ||
|TSSclassifier=strong | |||
|UniProt=Q5U0I4,Q9Y5U5,B1AME3 | |UniProt=Q5U0I4,Q9Y5U5,B1AME3 | ||
|association_with_transcript=-95bp_to_NM_004195,NM_148901,NM_148902,uc001adb.2,uc001adc.2,uc001add.2_5end | |association_with_transcript=-95bp_to_NM_004195,NM_148901,NM_148902,uc001adb.2,uc001adc.2,uc001add.2_5end | ||
|cluster_id=chr1:1142184..1142194,- | |||
|coexpression_cluster_id=C99 | |||
|description=CAGE_peak_2_at_TNFRSF18_5end | |description=CAGE_peak_2_at_TNFRSF18_5end | ||
|id=chr1:1142184..1142194,- | |id=chr1:1142184..1142194,- | ||
|ontology_enrichment_celltype=CL:0000080!9.12e-18!6;CL:0000988!2.08e-14!182;CL:0000738!4.85e-12!140;CL:0000037!6.53e-12!172;CL:0000566!6.53e-12!172;CL:0002032!1.66e-10!165;CL:0000837!1.66e-10!165;CL:0000542!1.38e-08!53;CL:0000051!1.38e-08!53;CL:0002031!2.17e-08!124;CL:0002274!5.94e-08!5;CL:0000457!5.94e-08!5;CL:0002191!5.94e-08!5;CL:0000097!5.94e-08!5;CL:0000831!5.94e-08!5;CL:0002028!5.94e-08!5;CL:0002087!7.98e-08!119;CL:0000838!2.40e-07!52 | |ontology_enrichment_celltype=CL:0000080!9.12e-18!6;CL:0000988!2.08e-14!182;CL:0000738!4.85e-12!140;CL:0000037!6.53e-12!172;CL:0000566!6.53e-12!172;CL:0002032!1.66e-10!165;CL:0000837!1.66e-10!165;CL:0000542!1.38e-08!53;CL:0000051!1.38e-08!53;CL:0002031!2.17e-08!124;CL:0002274!5.94e-08!5;CL:0000457!5.94e-08!5;CL:0002191!5.94e-08!5;CL:0000097!5.94e-08!5;CL:0000831!5.94e-08!5;CL:0002028!5.94e-08!5;CL:0002087!7.98e-08!119;CL:0000838!2.40e-07!52 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,5.65e-08,177 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0060060;9.99e-30;1!DOID:0060061;9.99e-30;1!DOID:8691;9.99e-30;1!DOID:1240;2.20e-07;39!DOID:2531;5.75e-07;51!DOID:0060083;5.75e-07;51 | |||
|ontology_enrichment_disease_v019_2=DOID:0060060,9.99e-30,1;DOID:0060061,9.99e-30,1;DOID:8691,9.99e-30,1;DOID:2531,2.22e-09,51;DOID:0060083,2.22e-09,51;DOID:1240,3.24e-07,39 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.38e-07!102;UBERON:0003061!1.38e-07!102;UBERON:0002193!1.56e-07!112;UBERON:0000178!6.66e-07!15;UBERON:0000179!6.66e-07!15;UBERON:0000463!6.66e-07!15 | |ontology_enrichment_uberon=UBERON:0002390!1.38e-07!102;UBERON:0003061!1.38e-07!102;UBERON:0002193!1.56e-07!112;UBERON:0000178!6.66e-07!15;UBERON:0000179!6.66e-07!15;UBERON:0000463!6.66e-07!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0002331;4.28e-26;10!UBERON:0000178;1.10e-17;15!UBERON:0000179;1.10e-17;15!UBERON:0000463;1.10e-17;15!UBERON:0000478;2.43e-11;24!UBERON:0002390;9.27e-09;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,4.28e-26,10;UBERON:0000358,4.28e-26,10;UBERON:0000307,4.28e-26,10;UBERON:0000091,4.28e-26,10;UBERON:0000087,4.28e-26,10;UBERON:0007010,4.28e-26,10;UBERON:0007806,4.28e-26,10;UBERON:0008780,4.28e-26,10;UBERON:0005728,4.28e-26,10;UBERON:0000178,1.10e-17,15;UBERON:0000179,1.10e-17,15;UBERON:0000463,1.10e-17,15;UBERON:0000478,2.43e-11,24 | |||
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| ||
|short_description=p2@TNFRSF18 | |short_description=p2@TNFRSF18 | ||
}} | }} |
Latest revision as of 05:58, 16 September 2015
Short description: | p2@TNFRSF18 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TNFRSF18_5end |
Coexpression cluster: | C99_hairy_mycosis_submaxillary_salivary_cord_kidney_parotid |
Association with transcript: | -95bp_to_NM_004195, NM_148901, NM_148902, uc001adb.2, uc001adc.2, uc001add.2_5end |
EntrezGene: | TNFRSF18 |
HGNC: | 11914 |
UniProt: | Q5U0I4Q9Y5U5B1AME3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 5.65e-08 | 177 |
Ontology term | p-value | n |
---|---|---|
umbilical cord | 4.28e-26 | 10 |
blastocyst | 4.28e-26 | 10 |
blastula | 4.28e-26 | 10 |
bilaminar disc | 4.28e-26 | 10 |
inner cell mass | 4.28e-26 | 10 |
cleaving embryo | 4.28e-26 | 10 |
connecting stalk | 4.28e-26 | 10 |
inner cell mass derived epiblast | 4.28e-26 | 10 |
extraembryonic mesoderm | 4.28e-26 | 10 |
blood | 1.10e-17 | 15 |
haemolymphatic fluid | 1.10e-17 | 15 |
organism substance | 1.10e-17 | 15 |
extraembryonic structure | 2.43e-11 | 24 |
Ontology term | p-value | n |
---|---|---|
non-Hodgkin lymphoma | 9.99e-30 | 1 |
cutaneous T cell lymphoma | 9.99e-30 | 1 |
mycosis fungoides | 9.99e-30 | 1 |
hematologic cancer | 2.22e-09 | 51 |
immune system cancer | 2.22e-09 | 51 |
leukemia | 3.24e-07 | 39 |