FFCP PHASE1:Hg19::chr1:162600666..162600681,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4921 | |EntrezGene=4921 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2731 | |HGNC=2731 | ||
|TSSclassifier=strong | |||
|UniProt=Q5T245 | |UniProt=Q5T245 | ||
|association_with_transcript=-481bp_to_ENST00000446985_5end | |association_with_transcript=-481bp_to_ENST00000446985_5end | ||
|cluster_id=chr1:162600666..162600681,+ | |||
|description=CAGE_peak_7_at_DDR2_5end | |description=CAGE_peak_7_at_DDR2_5end | ||
|id=chr1:162600666..162600681,+ | |id=chr1:162600666..162600681,+ | ||
|ontology_enrichment_celltype=CL:0000055!3.06e-31!180;CL:0000057!2.38e-24!75;CL:0002620!1.91e-12!23;CL:0000680!1.16e-11!57;CL:0000056!1.16e-11!57;CL:0000355!1.16e-11!57;CL:0000048!2.55e-11!430;CL:0000723!1.42e-10!436;CL:0000187!4.64e-10!54;CL:0000034!1.25e-09!444;CL:0000393!1.14e-08!60;CL:0000211!1.14e-08!60;CL:0000222!1.38e-08!119;CL:0000192!2.07e-08!42;CL:0000514!2.07e-08!42;CL:0000183!2.65e-08!59;CL:0000136!4.70e-08!15;CL:0002334!9.99e-08!12;CL:0000144!1.26e-07!625;CL:0002494!1.30e-07!16;CL:0000359!1.73e-07!32;CL:0002371!1.94e-07!591 | |ontology_enrichment_celltype=CL:0000055!3.06e-31!180;CL:0000057!2.38e-24!75;CL:0002620!1.91e-12!23;CL:0000680!1.16e-11!57;CL:0000056!1.16e-11!57;CL:0000355!1.16e-11!57;CL:0000048!2.55e-11!430;CL:0000723!1.42e-10!436;CL:0000187!4.64e-10!54;CL:0000034!1.25e-09!444;CL:0000393!1.14e-08!60;CL:0000211!1.14e-08!60;CL:0000222!1.38e-08!119;CL:0000192!2.07e-08!42;CL:0000514!2.07e-08!42;CL:0000183!2.65e-08!59;CL:0000136!4.70e-08!15;CL:0002334!9.99e-08!12;CL:0000144!1.26e-07!625;CL:0002494!1.30e-07!16;CL:0000359!1.73e-07!32;CL:0002371!1.94e-07!591 | ||
|ontology_enrichment_celltype_v019=CL:0002620;2.87e-16;23!CL:0000134;2.90e-12;55!CL:0000048;1.34e-11;58!CL:0000723;5.33e-10;61!CL:0000569;6.64e-09;4!CL:0000034;1.24e-07;69!CL:0002570;3.77e-07;8!CL:0002320;9.76e-07;188 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,1.30e-16,23;CL:0000057,1.39e-14,76;CL:0000048,4.24e-12,427;CL:0000723,1.12e-11,433;CL:0000034,3.88e-11,441;CL:0000134,1.39e-10,354;CL:0002320,4.46e-10,361;CL:0000219,2.00e-09,386;CL:0000569,3.18e-09,4;CL:0000011,3.18e-09,4;CL:0002570,5.04e-07,8 | |||
|ontology_enrichment_development_v019=CL:0000011;6.64e-09;4 | |||
|ontology_enrichment_disease=DOID:2394!1.99e-10!14 | |ontology_enrichment_disease=DOID:2394!1.99e-10!14 | ||
|ontology_enrichment_disease_v019=DOID:2394;4.41e-15;14!DOID:17;2.70e-12;5!DOID:450;2.70e-12;5!DOID:66;2.70e-12;5!DOID:423;2.70e-12;5!DOID:0080000;2.70e-12;5!DOID:11722;2.70e-12;5!DOID:0060084;2.34e-07;3!DOID:127;2.34e-07;3!DOID:120;9.69e-07;27 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.15e-14,14;DOID:17,2.42e-12,5;DOID:450,2.42e-12,5;DOID:66,2.42e-12,5;DOID:423,2.42e-12,5;DOID:0080000,2.42e-12,5;DOID:11722,2.42e-12,5;DOID:0060084,8.66e-08,3;DOID:127,8.66e-08,3 | |||
|ontology_enrichment_uberon=UBERON:0000914!1.21e-12!83;UBERON:0002329!1.21e-12!83;UBERON:0003077!1.21e-12!83;UBERON:0003059!1.21e-12!83;UBERON:0007282!1.21e-12!83;UBERON:0009618!1.21e-12!83;UBERON:0007285!1.21e-12!83;UBERON:0002385!2.74e-11!63;UBERON:0001015!2.74e-11!63;UBERON:0000383!2.74e-11!63;UBERON:0004290!6.82e-11!70;UBERON:0001134!1.17e-10!61;UBERON:0002036!1.17e-10!61;UBERON:0003082!1.17e-10!61;UBERON:0004872!1.97e-10!84;UBERON:0002199!1.68e-09!45;UBERON:0002416!1.68e-09!45;UBERON:0000486!7.66e-09!82;UBERON:0007100!8.31e-08!27;UBERON:0002097!8.41e-08!40;UBERON:0000948!1.55e-07!24;UBERON:0005498!1.55e-07!24;UBERON:0004140!1.55e-07!24;UBERON:0009881!1.55e-07!24;UBERON:0004141!1.55e-07!24;UBERON:0003084!1.55e-07!24;UBERON:0007005!1.55e-07!24;UBERON:0004139!1.55e-07!24;UBERON:0004291!1.55e-07!24;UBERON:0001009!1.91e-07!113;UBERON:0003102!3.40e-07!95;UBERON:0004535!4.16e-07!110;UBERON:0005256!8.11e-07!143;UBERON:0001013!9.68e-07!14 | |ontology_enrichment_uberon=UBERON:0000914!1.21e-12!83;UBERON:0002329!1.21e-12!83;UBERON:0003077!1.21e-12!83;UBERON:0003059!1.21e-12!83;UBERON:0007282!1.21e-12!83;UBERON:0009618!1.21e-12!83;UBERON:0007285!1.21e-12!83;UBERON:0002385!2.74e-11!63;UBERON:0001015!2.74e-11!63;UBERON:0000383!2.74e-11!63;UBERON:0004290!6.82e-11!70;UBERON:0001134!1.17e-10!61;UBERON:0002036!1.17e-10!61;UBERON:0003082!1.17e-10!61;UBERON:0004872!1.97e-10!84;UBERON:0002199!1.68e-09!45;UBERON:0002416!1.68e-09!45;UBERON:0000486!7.66e-09!82;UBERON:0007100!8.31e-08!27;UBERON:0002097!8.41e-08!40;UBERON:0000948!1.55e-07!24;UBERON:0005498!1.55e-07!24;UBERON:0004140!1.55e-07!24;UBERON:0009881!1.55e-07!24;UBERON:0004141!1.55e-07!24;UBERON:0003084!1.55e-07!24;UBERON:0007005!1.55e-07!24;UBERON:0004139!1.55e-07!24;UBERON:0004291!1.55e-07!24;UBERON:0001009!1.91e-07!113;UBERON:0003102!3.40e-07!95;UBERON:0004535!4.16e-07!110;UBERON:0005256!8.11e-07!143;UBERON:0001013!9.68e-07!14 | ||
|ontology_enrichment_uberon_v019=UBERON:0002199;4.89e-08;46!UBERON:0002416;4.89e-08;46!UBERON:0002097;1.54e-07;41!UBERON:0000992;1.60e-07;13!UBERON:0001013;2.50e-07;14!UBERON:0002118;4.06e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002199,3.48e-13,46;UBERON:0002416,3.48e-13,46;UBERON:0002097,1.37e-10,41;UBERON:0002384,5.27e-10,371;UBERON:0000992,2.64e-07,13;UBERON:0001013,2.77e-07,14;UBERON:0002118,7.78e-07,5 | |||
|phase1_expression=0.54503513781167,0.642301571672949,3.24195129420734,1.0007329835313,0.893922188854576,2.61701557230111,0,2.52687949370732,0.522371256399677,0,0.697801167972428,0,0,0.37129905888014,0.662794751455832,0.672325146451775,0,0.730310090387373,0.487932798790507,0,0.204000691244253,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.12786256184353,1.0843174571537,1.50401373190767,0.289693037921647,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.535798369704479,0.22452937262617,0.225222960966644,0,1.89853131913626,0.183201743930407,0,0,0,0,0.633152558322899,4.8991396900891,3.15520282823695,0.354668382198357,0,2.1349799145941,0.49333509683432,0.933633106199299,0.67355336034844,0.326923806226917,0,0.576175924479999,0.234321431833797,0.312160076830321,0,0.298897361103602,0,0.323745888736263,0.280901613404497,0.408308342509787,0.122834317311768,0.103325781175765,1.18800285728205,0.494533858557114,0,0.718618141816238,0.505008341862199,0.125118519871964,1.10825646193673,1.31693286264251,0.612975591598039,0.150238058906597,0.113432183160021,2.69084453533293,2.13557388818567,2.54318281391474,3.60109315301283,2.16410311400722,0.772921620136887,0.744467425326359,3.03797398034279,1.26668106709558,1.7670364197088,3.49789614840738,1.77810662500693,1.77504796258307,2.41805035746337,1.18692414617341,0,0,0,0,0,0,0,0,0,3.12899064659632,0,0,0.464367928031979,2.16563844500876,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0.4115740113314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52631302506568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205654985406647,0,0,0,0,0,3.87815147273333,0,2.535908257668,1.32969058292435,2.08014873822732,0,0,0.266422179016099,0.714889968290738,0,0,0.977208552881205,0.355391948742546,0,2.41151501647669,1.74306691720059,1.19967589418468,0,0,0,0.958499421966331,1.14861935834114,0,1.59259437334337,1.43833425785268,0.716243852959582,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0.613457458595699,0.500170521059677,0,1.87173775377726,0.892144943985809,0.473107245101804,1.40569697991256,0.902838299183157,0,1.03473071292505,0.664225598535437,0,1.65078867489357,0,0,0,0,0,0,0,0,2.97729369382532,0.61384789315225,0.561320188866147,3.71603532841533,0.511707249066704,0.965123526861645,0,1.07946785661859,1.77561725313127,2.7101961484557,0.519254429183621,0.929683027679674,0,0,0,0.229628896329213,0,0.786746489756545,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0.412164046590889,0,0,0,0,0,0.48335359146061,1.07834031980251,0,0.275673144969061,0.537101224341368,0.145016693914229,0.511359764496605,0.0890320356467374,0,0,0,0,0.464845549297286,0.94443704049192,0,0,1.06461206063404,3.47973196830029,0.37064843820784,0.572499546967965,0,0.632758849437452,0.762520775695299,0,0.42793898803392,1.59101623962968,0,0.719489830333259,0.54907405947211,0.235624804691373,0.404364963146632,1.58510321173008,0.421258456238981,0,0.243713489631284,0,1.09199929126389,0.707027159768564,0,0.551365343546124,0.66343897524122,1.31535265576129,0,0,0.608731130888112,0,0.281695602532241,1.43411352204052,0.88424136911809,0,1.41904425628239,1.05553817648832,2.30506425071931,0.379473173765715,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.879049075631364,0,0,0,0,6.23625829748541,0,0,0,1.00177834520615,0,0,0,0.276283915531148,0,0.20453736500431,0,0.933118762985422,0,0,0,0.887790650732402,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.692552326534174,0.683652335082007,0,0,0,0.31900115973192,0.641183153813036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.796118080530053,0,0.296521128680622,0.123563938946503,0.208843899010911,0,0,0,0,0,0,0.789168805698781,0,0,0.31593289814244,0,0,0,0,0,0,0,0,0,0,0,0,0.343972064943233,0,0,0,0.872901148395775,0,0,0.411125773940253,0.19871461170299,0,0,0,0,0,0,0,0,0,0,0,0.951329442515298,1.35983700206033,0,2.31160471921215,0,0,0,0.859530882839914,0,0.558564802544508,0,0,0,0.429226048136571,0.669514372325618,0.268733889946905,2.52209918479682,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.714695326373367,0.662091970365432,0,3.80099721227599,1.72844298240254,1.95952416065645,3.59190574687462,0,2.3854323049959,0.113312091520126,0,0,0,0.13223260174269,0,0,0.427149650270779,0,0,0,0,0,0,0,1.2534494701135,0.612691153526923,0.655745261419609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.23882204330311,0.467426619694449,2.77402930751307,1.51522404220071,1.25783950876288,0,2.74608082076308,1.66354016139563,1.86524640699337,1.18284119991707,2.07085797312813,3.14862178514523,0.465788870628778,0.829412415681711,2.39257543102195,2.08698024724694,4.50772826991655,4.95046775819434,1.22061219961398,2.00033525122815,1.07410557042488,1.39210127963548,0.796191777397232,0,2.06037423109676,1.01024846629776,0,0.57785949122191,0.214441591374926,0,0.453411851024545,0,0,0.35817768216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| ||
|short_description=p7@DDR2 | |short_description=p7@DDR2 | ||
}} | }} |
Latest revision as of 07:24, 18 September 2015
Short description: | p7@DDR2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_DDR2_5end |
Coexpression cluster: | NA |
Association with transcript: | -481bp_to_ENST00000446985_5end |
EntrezGene: | DDR2 |
HGNC: | 2731 |
UniProt: | Q5T245 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 1.30e-16 | 23 |
fibroblast | 1.39e-14 | 76 |
multi fate stem cell | 4.24e-12 | 427 |
somatic stem cell | 1.12e-11 | 433 |
stem cell | 3.88e-11 | 441 |
mesenchymal cell | 1.39e-10 | 354 |
connective tissue cell | 4.46e-10 | 361 |
motile cell | 2.00e-09 | 386 |
cardiac mesenchymal cell | 3.18e-09 | 4 |
migratory trunk neural crest cell | 3.18e-09 | 4 |
mesenchymal stem cell of adipose | 5.04e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
integument | 3.48e-13 | 46 |
integumental system | 3.48e-13 | 46 |
skin of body | 1.37e-10 | 41 |
connective tissue | 5.27e-10 | 371 |
female gonad | 2.64e-07 | 13 |
adipose tissue | 2.77e-07 | 14 |
right ovary | 7.78e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.15e-14 | 14 |
musculoskeletal system disease | 2.42e-12 | 5 |
myotonic disease | 2.42e-12 | 5 |
muscle tissue disease | 2.42e-12 | 5 |
myopathy | 2.42e-12 | 5 |
muscular disease | 2.42e-12 | 5 |
myotonic dystrophy | 2.42e-12 | 5 |
cell type benign neoplasm | 8.66e-08 | 3 |
leiomyoma | 8.66e-08 | 3 |