FFCP PHASE1:Hg19::chr3:14733266..14733274,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:14733266..14733274,+ | |||
|coexpression_cluster_id=C2052 | |||
|description=CAGE_peak_at_chr3:14733266..14733274,+ | |description=CAGE_peak_at_chr3:14733266..14733274,+ | ||
|id=chr3:14733266..14733274,+ | |id=chr3:14733266..14733274,+ | ||
|ontology_enrichment_celltype=CL:0000738!3.50e-48!140;CL:0000988!2.99e-46!182;CL:0000037!5.33e-46!172;CL:0000566!5.33e-46!172;CL:0002057!4.86e-43!42;CL:0002032!1.58e-40!165;CL:0000837!1.58e-40!165;CL:0000860!1.12e-39!45;CL:0002087!1.14e-37!119;CL:0002009!1.11e-36!65;CL:0002031!7.08e-36!124;CL:0000557!2.85e-35!71;CL:0000763!5.36e-35!112;CL:0000049!5.36e-35!112;CL:0000766!7.24e-35!76;CL:0002194!1.21e-32!63;CL:0000576!1.21e-32!63;CL:0000040!1.21e-32!63;CL:0000559!1.21e-32!63;CL:0000839!7.54e-31!70;CL:0002393!2.25e-27!9;CL:0002397!2.25e-27!9;CL:0000134!4.03e-15!358;CL:0002320!1.42e-14!365;CL:0000219!2.20e-13!390;CL:0000451!1.15e-12!10;CL:0000990!1.05e-11!8;CL:0000034!4.54e-11!444;CL:0000767!1.81e-10!3;CL:0000048!2.39e-10!430;CL:0000453!3.33e-10!5;CL:0000945!4.66e-10!24;CL:0000826!4.66e-10!24;CL:0000723!5.07e-10!436;CL:0000875!8.35e-10!3;CL:0002396!8.35e-10!3;CL:0000840!1.86e-08!5;CL:0001029!1.86e-08!5;CL:0000080!9.04e-08!6;CL:0001014!1.69e-07!2;CL:0001016!1.69e-07!2 | |ontology_enrichment_celltype=CL:0000738!3.50e-48!140;CL:0000988!2.99e-46!182;CL:0000037!5.33e-46!172;CL:0000566!5.33e-46!172;CL:0002057!4.86e-43!42;CL:0002032!1.58e-40!165;CL:0000837!1.58e-40!165;CL:0000860!1.12e-39!45;CL:0002087!1.14e-37!119;CL:0002009!1.11e-36!65;CL:0002031!7.08e-36!124;CL:0000557!2.85e-35!71;CL:0000763!5.36e-35!112;CL:0000049!5.36e-35!112;CL:0000766!7.24e-35!76;CL:0002194!1.21e-32!63;CL:0000576!1.21e-32!63;CL:0000040!1.21e-32!63;CL:0000559!1.21e-32!63;CL:0000839!7.54e-31!70;CL:0002393!2.25e-27!9;CL:0002397!2.25e-27!9;CL:0000134!4.03e-15!358;CL:0002320!1.42e-14!365;CL:0000219!2.20e-13!390;CL:0000451!1.15e-12!10;CL:0000990!1.05e-11!8;CL:0000034!4.54e-11!444;CL:0000767!1.81e-10!3;CL:0000048!2.39e-10!430;CL:0000453!3.33e-10!5;CL:0000945!4.66e-10!24;CL:0000826!4.66e-10!24;CL:0000723!5.07e-10!436;CL:0000875!8.35e-10!3;CL:0002396!8.35e-10!3;CL:0000840!1.86e-08!5;CL:0001029!1.86e-08!5;CL:0000080!9.04e-08!6;CL:0001014!1.69e-07!2;CL:0001016!1.69e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0002393;1.90e-48;6!CL:0002397;1.90e-48;6!CL:0000767;4.89e-17;3!CL:0000576;1.70e-14;48!CL:0000037;1.61e-13;1!CL:0001024;1.61e-13;1!CL:0000766;2.67e-10;69!CL:0000860;8.73e-08;33!CL:0002057;8.73e-08;33!CL:0001014;4.29e-07;2!CL:0001016;4.29e-07;2!CL:0000094;6.06e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0002393,3.28e-32,9;CL:0002397,3.28e-32,9;CL:0000860,2.02e-26,42;CL:0002057,2.02e-26,42;CL:0000473,5.66e-23,48;CL:0000234,5.66e-23,48;CL:0000766,1.76e-21,72;CL:0002009,2.76e-21,61;CL:0000557,2.75e-19,67;CL:0002194,3.84e-18,59;CL:0000576,3.84e-18,59;CL:0000040,3.84e-18,59;CL:0000559,3.84e-18,59;CL:0000767,5.30e-17,3;CL:0000763,1.99e-16,108;CL:0000049,1.99e-16,108;CL:0000839,4.04e-16,66;CL:0000738,6.83e-15,136;CL:0000037,1.08e-13,168;CL:0001024,1.61e-13,1;CL:0000988,6.71e-13,177;CL:0002032,2.63e-12,161;CL:0000837,2.63e-12,161;CL:0002031,2.99e-12,120;CL:0002087,1.10e-10,115;CL:0001014,3.48e-07,2;CL:0001016,3.48e-07,2;CL:0000094,6.24e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;5.23e-18;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!5.19e-35!102;UBERON:0003061!5.19e-35!102;UBERON:0002371!9.46e-33!80;UBERON:0002193!5.46e-31!112;UBERON:0001474!7.26e-30!86;UBERON:0004765!3.76e-24!101;UBERON:0001434!3.76e-24!101;UBERON:0002405!1.05e-21!115;UBERON:0002384!1.26e-14!375;UBERON:0003081!2.37e-11!216;UBERON:0002204!2.69e-11!167 | |ontology_enrichment_uberon=UBERON:0002390!5.19e-35!102;UBERON:0003061!5.19e-35!102;UBERON:0002371!9.46e-33!80;UBERON:0002193!5.46e-31!112;UBERON:0001474!7.26e-30!86;UBERON:0004765!3.76e-24!101;UBERON:0001434!3.76e-24!101;UBERON:0002405!1.05e-21!115;UBERON:0002384!1.26e-14!375;UBERON:0003081!2.37e-11!216;UBERON:0002204!2.69e-11!167 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.92e-20,76;UBERON:0001474,1.10e-18,82;UBERON:0004765,6.60e-17,90;UBERON:0002405,2.57e-16,93;UBERON:0002390,2.05e-15,98;UBERON:0003061,2.05e-15,98;UBERON:0001434,4.46e-15,100;UBERON:0002193,7.46e-14,108;UBERON:0002204,2.08e-08,167 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.164201178899891,0.708397031823113,0.393364276848904,3.0706351847777,6.65709330259127,0,0,0,0.0774672005803016,0.142169232487422,11.1568166947242,3.32397245119126,1.40381113229099,1.08505435357926,0,0,0,0.145398238779565,0,0,0,0,0.309706370895104,0.28769239232215,0,1.18241114944293,0,0,1.35426486594342,0,0,0.674170453335254,0.306083892370903,0.320929027076094,1.91801137739712,0,0.199463657621632,0,0,0,0.622822248995575,0,0,0.868755378820466,0,0.736555271975129,2.53169909952708,0.633765858935825,2.76385589954557,1.04829322754188,0.336985893439485,1.50176892841506,0.32145117339416,0.855038231223746,0.39783335439818,0.365328307529268,0,0,0,0,0,0,0,0,0,0.587237189370939,0.382273228125229,1.32171328579026,0,3.16060901730092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.174129737299267,0,0.715471872916026,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288239906833923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394061520403854,0,0.513372145118994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.862856803274467,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0,0,0,0.185803175125719,0,0,0,0,0,0,0,0,0,0.156679895773023,0,0,0.1605880751037,0.201799707191048,0.425846237690326,0,0,0,0.166849141711909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246169610922139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123563938946503,0.104421949505455,0,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5748172408605,0.77380195455795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,1.09613338542806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0.817826971279221,0,0,0,0,0.213383459388282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.576169937778896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173858272302579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.599646935549574,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.164201178899891,0.708397031823113,0.393364276848904,3.0706351847777,6.65709330259127,0,0,0,0.0774672005803016,0.142169232487422,11.1568166947242,3.32397245119126,1.40381113229099,1.08505435357926,0,0,0,0.145398238779565,0,0,0,0,0.309706370895104,0.28769239232215,0,1.18241114944293,0,0,1.35426486594342,0,0,0.674170453335254,0.306083892370903,0.320929027076094,1.91801137739712,0,0.199463657621632,0,0,0,0.622822248995575,0,0,0.868755378820466,0,0.736555271975129,2.53169909952708,0.633765858935825,2.76385589954557,1.04829322754188,0.336985893439485,1.50176892841506,0.32145117339416,0.855038231223746,0.39783335439818,0.365328307529268,0,0,0,0,0,0,0,0,0,0.587237189370939,0.382273228125229,1.32171328579026,0,3.16060901730092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.174129737299267,0,0.715471872916026,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288239906833923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394061520403854,0,0.513372145118994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.862856803274467,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0,0,0,0.185803175125719,0,0,0,0,0,0,0,0,0,0.156679895773023,0,0,0.1605880751037,0.201799707191048,0.425846237690326,0,0,0,0.166849141711909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246169610922139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123563938946503,0.104421949505455,0,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5748172408605,0.77380195455795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,1.09613338542806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0.817826971279221,0,0,0,0,0.213383459388282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.576169937778896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173858272302579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.599646935549574,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr3:14733266..14733274,+ | |short_description=p@chr3:14733266..14733274,+ | ||
}} | }} |
Latest revision as of 16:46, 29 July 2015
Short description: | p@chr3:14733266..14733274, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:14733266..14733274, + |
Coexpression cluster: | C2052_CD133_CD34_CD14_Basophils_chronic_Peripheral_leukemia |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.92e-20 | 76 |
bone element | 1.10e-18 | 82 |
skeletal element | 6.60e-17 | 90 |
immune system | 2.57e-16 | 93 |
hematopoietic system | 2.05e-15 | 98 |
blood island | 2.05e-15 | 98 |
skeletal system | 4.46e-15 | 100 |
hemolymphoid system | 7.46e-14 | 108 |
musculoskeletal system | 2.08e-08 | 167 |