FFCP PHASE1:Hg19::chr17:74724316..74724318,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr17:74724316..74724318,-
|short_description=p@chr17:74724316..74724318,-
|description=CAGE_peak_at_chr17:74724316..74724318,-
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr17:74724316..74724318,- | |||
|description=CAGE_peak_at_chr17:74724316..74724318,- | |||
|id=chr17:74724316..74724318,- | |||
|ontology_enrichment_celltype=CL:0000838!2.38e-09!52;CL:0000542!4.82e-09!53;CL:0000051!4.82e-09!53 | |||
|ontology_enrichment_celltype_v019=CL:0002127;1.40e-14;1!CL:0000817;1.40e-14;1!CL:0000911;1.40e-14;1!CL:0000814;1.40e-14;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002127,9.36e-15,1;CL:0000914,9.36e-15,1;CL:0000911,9.36e-15,1;CL:0000814,9.36e-15,1;CL:0002042,9.36e-15,1;CL:0002039,9.36e-15,1;CL:0002040,9.36e-15,1;CL:0002041,9.36e-15,1;CL:0000893,5.02e-08,2;CL:0002489,5.02e-08,2;CL:0000809,5.02e-08,2;CL:0000808,5.02e-08,2;CL:0000894,5.02e-08,2;CL:0000806,5.02e-08,2;CL:0000807,5.02e-08,2;CL:0000805,5.02e-08,2;CL:0002425,5.02e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0005425;1.40e-14;1!CL:0002425;6.14e-08;2 | |||
|ontology_enrichment_disease=DOID:14566!8.97e-37!239;DOID:162!2.17e-36!235;DOID:0050687!1.04e-24!143;DOID:305!8.42e-20!106;DOID:0050686!7.36e-19!137;DOID:1749!9.85e-16!14;DOID:2531!9.89e-08!51;DOID:0060083!9.89e-08!51 | |||
|ontology_enrichment_disease_v019=DOID:1799;1.40e-14;1!DOID:10165;1.40e-14;1!DOID:1798;1.40e-14;1!DOID:9119;1.40e-14;1 | |||
|ontology_enrichment_disease_v019_2=DOID:9119,1.61e-14,1;DOID:1799,1.84e-14,1;DOID:10165,1.84e-14,1;DOID:1798,1.84e-14,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;1.40e-14;1!UBERON:0001785;1.40e-14;1!UBERON:0002464;1.40e-14;1!UBERON:0004904;1.40e-14;1!UBERON:0001021;1.40e-14;1!UBERON:0003714;6.14e-08;2!UBERON:0005162;6.14e-08;2!UBERON:0000122;6.14e-08;2!UBERON:0000010;6.69e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,1.07e-14,1;UBERON:0001785,1.07e-14,1;UBERON:0002464,1.07e-14,1;UBERON:0004904,1.07e-14,1;UBERON:0001021,1.07e-14,1;UBERON:0003902,1.07e-14,1;UBERON:0005425,1.07e-14,1;UBERON:0003714,5.37e-08,2;UBERON:0005162,5.37e-08,2;UBERON:0000122,5.37e-08,2;UBERON:0000010,6.41e-07,8 | |||
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| ||
|short_description=p@chr17:74724316..74724318,- | |||
}} | }} |
Latest revision as of 21:34, 25 July 2015
Short description: | p@chr17:74724316..74724318, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:74724316..74724318, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
innate effector T cell | 9.36e-15 | 1 |
immature NK T cell | 9.36e-15 | 1 |
effector T cell | 9.36e-15 | 1 |
mature NK T cell | 9.36e-15 | 1 |
immature NK T cell stage IV | 9.36e-15 | 1 |
immature NK T cell stage I | 9.36e-15 | 1 |
immature NK T cell stage II | 9.36e-15 | 1 |
immature NK T cell stage III | 9.36e-15 | 1 |
thymocyte | 5.02e-08 | 2 |
double negative thymocyte | 5.02e-08 | 2 |
double-positive, alpha-beta thymocyte | 5.02e-08 | 2 |
DN4 thymocyte | 5.02e-08 | 2 |
DN1 thymic pro-T cell | 5.02e-08 | 2 |
DN2 thymocyte | 5.02e-08 | 2 |
DN3 thymocyte | 5.02e-08 | 2 |
immature single positive thymocyte | 5.02e-08 | 2 |
early T lineage precursor | 5.02e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 1.07e-14 | 1 |
cranial nerve | 1.07e-14 | 1 |
nerve trunk | 1.07e-14 | 1 |
nerve connecting eye with brain | 1.07e-14 | 1 |
nerve | 1.07e-14 | 1 |
retinal neural layer | 1.07e-14 | 1 |
presumptive neural retina | 1.07e-14 | 1 |
neural tissue | 5.37e-08 | 2 |
multi cell component structure | 5.37e-08 | 2 |
neuron projection bundle | 5.37e-08 | 2 |
peripheral nervous system | 6.41e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
acute myeloid leukemia | 1.61e-14 | 1 |
islet cell tumor | 1.84e-14 | 1 |
endocrine pancreas cancer | 1.84e-14 | 1 |
pancreatic endocrine carcinoma | 1.84e-14 | 1 |