FFCP PHASE1:Hg19::chr10:135092117..135092130,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:135092117..135092130,- | |||
|coexpression_cluster_id=C2 | |coexpression_cluster_id=C2 | ||
|description=CAGE_peak_at_chr10:135092117..135092130,- | |description=CAGE_peak_at_chr10:135092117..135092130,- | ||
|id=chr10:135092117..135092130,- | |id=chr10:135092117..135092130,- | ||
|ontology_enrichment_celltype=CL:0000766!5.22e-56!76;CL:0002057!3.10e-55!42;CL:0000738!4.12e-53!140;CL:0000860!7.42e-51!45;CL:0000037!3.02e-43!172;CL:0000566!3.02e-43!172;CL:0000557!7.47e-41!71;CL:0000988!6.36e-40!182;CL:0000763!3.40e-39!112;CL:0000049!3.40e-39!112;CL:0000839!4.15e-39!70;CL:0002032!4.79e-39!165;CL:0000837!4.79e-39!165;CL:0002009!5.08e-38!65;CL:0002194!5.13e-37!63;CL:0000576!5.13e-37!63;CL:0000040!5.13e-37!63;CL:0000559!5.13e-37!63;CL:0002087!1.21e-36!119;CL:0002031!7.08e-35!124;CL:0000094!2.00e-20!8;CL:0000081!2.31e-14!11;CL:0000134!1.10e-12!358;CL:0002320!3.99e-12!365;CL:0002393!6.89e-12!9;CL:0002397!6.89e-12!9;CL:0000219!3.57e-10!390;CL:0000775!8.46e-09!3;CL:0000767!1.49e-08!3;CL:0000623!1.61e-08!3;CL:0000825!1.61e-08!3;CL:0000034!3.07e-08!444;CL:0000048!7.01e-08!430;CL:0000842!9.52e-08!3;CL:0000723!1.47e-07!436 | |ontology_enrichment_celltype=CL:0000766!5.22e-56!76;CL:0002057!3.10e-55!42;CL:0000738!4.12e-53!140;CL:0000860!7.42e-51!45;CL:0000037!3.02e-43!172;CL:0000566!3.02e-43!172;CL:0000557!7.47e-41!71;CL:0000988!6.36e-40!182;CL:0000763!3.40e-39!112;CL:0000049!3.40e-39!112;CL:0000839!4.15e-39!70;CL:0002032!4.79e-39!165;CL:0000837!4.79e-39!165;CL:0002009!5.08e-38!65;CL:0002194!5.13e-37!63;CL:0000576!5.13e-37!63;CL:0000040!5.13e-37!63;CL:0000559!5.13e-37!63;CL:0002087!1.21e-36!119;CL:0002031!7.08e-35!124;CL:0000094!2.00e-20!8;CL:0000081!2.31e-14!11;CL:0000134!1.10e-12!358;CL:0002320!3.99e-12!365;CL:0002393!6.89e-12!9;CL:0002397!6.89e-12!9;CL:0000219!3.57e-10!390;CL:0000775!8.46e-09!3;CL:0000767!1.49e-08!3;CL:0000623!1.61e-08!3;CL:0000825!1.61e-08!3;CL:0000034!3.07e-08!444;CL:0000048!7.01e-08!430;CL:0000842!9.52e-08!3;CL:0000723!1.47e-07!436 | ||
|ontology_enrichment_celltype_v019=CL:0000094;2.54e-48;8!CL:0000081;7.78e-35;11!CL:0000775;2.54e-19;3!CL:0000767;5.60e-19;3!CL:0000623;8.05e-19;3!CL:0000766;5.13e-16;69!CL:0000860;1.47e-14;33!CL:0002057;1.47e-14;33!CL:0000771;1.38e-13;2!CL:0000576;4.15e-11;48!CL:0000473;1.47e-10;39!CL:0000234;1.47e-10;39!CL:0002393;1.15e-09;6!CL:0002397;1.15e-09;6!CL:0000763;1.31e-08;100!CL:0002087;2.17e-08;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000094,3.08e-48,8;CL:0000766,7.28e-35,72;CL:0000081,8.93e-35,11;CL:0000738,1.46e-28,136;CL:0000763,4.21e-24,108;CL:0000049,4.21e-24,108;CL:0000037,4.03e-22,168;CL:0002032,1.90e-21,161;CL:0000837,1.90e-21,161;CL:0000860,8.93e-21,42;CL:0002057,8.93e-21,42;CL:0000988,1.00e-20,177;CL:0000775,2.12e-19,3;CL:0000767,8.57e-19,3;CL:0000623,1.03e-18,3;CL:0000825,1.03e-18,3;CL:0000473,7.39e-18,48;CL:0000234,7.39e-18,48;CL:0000557,3.42e-16,67;CL:0002009,1.62e-15,61;CL:0000839,3.26e-14,66;CL:0002194,8.94e-14,59;CL:0000576,8.94e-14,59;CL:0000040,8.94e-14,59;CL:0000559,8.94e-14,59;CL:0000771,1.30e-13,2;CL:0002031,1.91e-13,120;CL:0002087,1.81e-12,115;CL:0000134,1.28e-07,354;CL:0002320,2.32e-07,361 | |||
|ontology_enrichment_development_v019=CL:0002057;6.13e-14;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.49e-41!102;UBERON:0003061!1.49e-41!102;UBERON:0002193!2.75e-38!112;UBERON:0002371!5.34e-35!80;UBERON:0001474!8.91e-32!86;UBERON:0004765!2.10e-25!101;UBERON:0001434!2.10e-25!101;UBERON:0002405!1.51e-23!115;UBERON:0003081!1.07e-12!216;UBERON:0002384!2.29e-11!375;UBERON:0002204!3.50e-11!167;UBERON:0000178!4.01e-09!15;UBERON:0000179!4.01e-09!15;UBERON:0000463!4.01e-09!15 | |ontology_enrichment_uberon=UBERON:0002390!1.49e-41!102;UBERON:0003061!1.49e-41!102;UBERON:0002193!2.75e-38!112;UBERON:0002371!5.34e-35!80;UBERON:0001474!8.91e-32!86;UBERON:0004765!2.10e-25!101;UBERON:0001434!2.10e-25!101;UBERON:0002405!1.51e-23!115;UBERON:0003081!1.07e-12!216;UBERON:0002384!2.29e-11!375;UBERON:0002204!3.50e-11!167;UBERON:0000178!4.01e-09!15;UBERON:0000179!4.01e-09!15;UBERON:0000463!4.01e-09!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.61e-09;15!UBERON:0000179;1.61e-09;15!UBERON:0000463;1.61e-09;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.41e-19,98;UBERON:0003061,2.41e-19,98;UBERON:0002193,3.46e-17,108;UBERON:0002371,6.08e-14,76;UBERON:0001474,1.03e-12,82;UBERON:0004765,2.49e-11,90;UBERON:0002405,7.14e-11,93;UBERON:0001434,6.53e-10,100;UBERON:0000178,1.36e-09,15;UBERON:0000179,1.36e-09,15;UBERON:0000463,1.36e-09,15;UBERON:0003081,2.84e-07,203;UBERON:0002384,5.17e-07,371 | |||
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| ||
|short_description=p@chr10:135092117..135092130,- | |short_description=p@chr10:135092117..135092130,- | ||
}} | }} |
Latest revision as of 11:51, 23 July 2015
Short description: | p@chr10:135092117..135092130, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:135092117..135092130, - |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte | 3.08e-48 | 8 |
myeloid leukocyte | 7.28e-35 | 72 |
blood cell | 8.93e-35 | 11 |
leukocyte | 1.46e-28 | 136 |
myeloid cell | 4.21e-24 | 108 |
common myeloid progenitor | 4.21e-24 | 108 |
hematopoietic stem cell | 4.03e-22 | 168 |
hematopoietic oligopotent progenitor cell | 1.90e-21 | 161 |
hematopoietic multipotent progenitor cell | 1.90e-21 | 161 |
classical monocyte | 8.93e-21 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.93e-21 | 42 |
hematopoietic cell | 1.00e-20 | 177 |
neutrophil | 2.12e-19 | 3 |
basophil | 8.57e-19 | 3 |
natural killer cell | 1.03e-18 | 3 |
pro-NK cell | 1.03e-18 | 3 |
defensive cell | 7.39e-18 | 48 |
phagocyte | 7.39e-18 | 48 |
granulocyte monocyte progenitor cell | 3.42e-16 | 67 |
macrophage dendritic cell progenitor | 1.62e-15 | 61 |
myeloid lineage restricted progenitor cell | 3.26e-14 | 66 |
monopoietic cell | 8.94e-14 | 59 |
monocyte | 8.94e-14 | 59 |
monoblast | 8.94e-14 | 59 |
promonocyte | 8.94e-14 | 59 |
eosinophil | 1.30e-13 | 2 |
hematopoietic lineage restricted progenitor cell | 1.91e-13 | 120 |
nongranular leukocyte | 1.81e-12 | 115 |
mesenchymal cell | 1.28e-07 | 354 |
connective tissue cell | 2.32e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.41e-19 | 98 |
blood island | 2.41e-19 | 98 |
hemolymphoid system | 3.46e-17 | 108 |
bone marrow | 6.08e-14 | 76 |
bone element | 1.03e-12 | 82 |
skeletal element | 2.49e-11 | 90 |
immune system | 7.14e-11 | 93 |
skeletal system | 6.53e-10 | 100 |
blood | 1.36e-09 | 15 |
haemolymphatic fluid | 1.36e-09 | 15 |
organism substance | 1.36e-09 | 15 |
lateral plate mesoderm | 2.84e-07 | 203 |
connective tissue | 5.17e-07 | 371 |