FFCP PHASE1:Hg19::chr10:17456684..17456702,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:17456684..17456702,- | |||
|coexpression_cluster_id=C3001 | |coexpression_cluster_id=C3001 | ||
|description=CAGE_peak_at_chr10:17456684..17456702,- | |description=CAGE_peak_at_chr10:17456684..17456702,- | ||
|id=chr10:17456684..17456702,- | |id=chr10:17456684..17456702,- | ||
|ontology_enrichment_celltype=CL:0002274!4.77e-35!5;CL:0000457!4.77e-35!5;CL:0002191!4.77e-35!5;CL:0000097!4.77e-35!5;CL:0000831!4.77e-35!5;CL:0002028!4.77e-35!5;CL:0000163!1.95e-19!9;CL:0000763!1.46e-16!112;CL:0000049!1.46e-16!112;CL:0000764!5.52e-15!2;CL:0000765!5.52e-15!2;CL:0000050!5.52e-15!2;CL:0000038!5.52e-15!2;CL:0000558!5.52e-15!2;CL:0000547!5.52e-15!2;CL:0000549!5.52e-15!2;CL:0000550!5.52e-15!2;CL:0000552!5.52e-15!2;CL:0000037!2.89e-12!172;CL:0000566!2.89e-12!172;CL:0000988!2.21e-11!182;CL:0002032!3.82e-10!165;CL:0000837!3.82e-10!165;CL:0001024!2.89e-08!1 | |ontology_enrichment_celltype=CL:0002274!4.77e-35!5;CL:0000457!4.77e-35!5;CL:0002191!4.77e-35!5;CL:0000097!4.77e-35!5;CL:0000831!4.77e-35!5;CL:0002028!4.77e-35!5;CL:0000163!1.95e-19!9;CL:0000763!1.46e-16!112;CL:0000049!1.46e-16!112;CL:0000764!5.52e-15!2;CL:0000765!5.52e-15!2;CL:0000050!5.52e-15!2;CL:0000038!5.52e-15!2;CL:0000558!5.52e-15!2;CL:0000547!5.52e-15!2;CL:0000549!5.52e-15!2;CL:0000550!5.52e-15!2;CL:0000552!5.52e-15!2;CL:0000037!2.89e-12!172;CL:0000566!2.89e-12!172;CL:0000988!2.21e-11!182;CL:0002032!3.82e-10!165;CL:0000837!3.82e-10!165;CL:0001024!2.89e-08!1 | ||
|ontology_enrichment_celltype_v019=CL:0000097;9.19e-40;5!CL:0000764;3.45e-25;2!CL:0000558;3.45e-25;2!CL:0000163;2.76e-22;9!CL:0000037;1.72e-13;1!CL:0001024;1.72e-13;1!CL:0000763;3.98e-08;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,1.07e-39,5;CL:0002028,1.07e-39,5;CL:0000764,2.69e-25,2;CL:0000765,2.69e-25,2;CL:0000050,2.69e-25,2;CL:0000038,2.69e-25,2;CL:0000558,2.69e-25,2;CL:0000547,2.69e-25,2;CL:0000549,2.69e-25,2;CL:0000550,2.69e-25,2;CL:0000552,2.69e-25,2;CL:0000163,3.00e-22,9;CL:0000763,5.33e-15,108;CL:0000049,5.33e-15,108;CL:0001024,2.07e-13,1;CL:0000037,7.76e-11,168;CL:0000988,3.34e-10,177;CL:0002032,1.38e-09,161;CL:0000837,1.38e-09,161 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:8692!4.82e-21!31;DOID:1240!2.22e-16!39;DOID:1036!3.33e-14!8;DOID:2531!3.99e-12!51;DOID:0060083!3.99e-12!51;DOID:8552!9.79e-09!1 | |ontology_enrichment_disease=DOID:8692!4.82e-21!31;DOID:1240!2.22e-16!39;DOID:1036!3.33e-14!8;DOID:2531!3.99e-12!51;DOID:0060083!3.99e-12!51;DOID:8552!9.79e-09!1 | ||
|ontology_enrichment_disease_v019=DOID:8552;3.08e-14;1!DOID:8692;1.37e-13;31!DOID:1240;1.71e-08;39!DOID:1036;3.45e-07;8 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,2.09e-14,31;DOID:8552,3.08e-14,1;DOID:1240,2.20e-11,39;DOID:2531,1.28e-08,51;DOID:0060083,1.28e-08,51;DOID:1036,3.45e-07,8 | |||
|ontology_enrichment_uberon=UBERON:0002171!4.11e-08!1;UBERON:0006518!4.11e-08!1;UBERON:0008949!4.11e-08!1;UBERON:0000101!4.11e-08!1;UBERON:0002167!4.11e-08!1;UBERON:0001154!4.72e-08!1;UBERON:0001153!4.72e-08!1 | |ontology_enrichment_uberon=UBERON:0002171!4.11e-08!1;UBERON:0006518!4.11e-08!1;UBERON:0008949!4.11e-08!1;UBERON:0000101!4.11e-08!1;UBERON:0002167!4.11e-08!1;UBERON:0001154!4.72e-08!1;UBERON:0001153!4.72e-08!1 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0,0,0,0,0,0,1.17440175733939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.96513985737078,3.92355994087075,2.37045676297569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.3312544716067,4.93071230474066,0.621984346622316,1.44119953416961,2.14612136824846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75407901316748,1.8300481571743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0,0,0,0,0,0,0,0,0.191505370132367,15.2404979561196,0,0,0.684704037099577,0,0,0,0,0,0,0,0,0,0,0,0,0,38.1342506651136,0,148.036355342242,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,157.402462759448,0.451191321234361,0.588187602953219,0,0,2.2251121057253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134366944973453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,25.5307739530444,0,0,0,0,0,0,0,0,0,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0,0,0,0,0,0,1.17440175733939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.96513985737078,3.92355994087075,2.37045676297569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.3312544716067,4.93071230474066,0.621984346622316,1.44119953416961,2.14612136824846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75407901316748,1.8300481571743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0,0,0,0,0,0,0,0,0.191505370132367,15.2404979561196,0,0,0.684704037099577,0,0,0,0,0,0,0,0,0,0,0,0,0,38.1342506651136,0,148.036355342242,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,157.402462759448,0.451191321234361,0.588187602953219,0,0,2.2251121057253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134366944973453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,25.5307739530444,0,0,0,0,0,0,0,0,0,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr10:17456684..17456702,- | |short_description=p@chr10:17456684..17456702,- | ||
}} | }} |
Latest revision as of 12:19, 23 July 2015
Short description: | p@chr10:17456684..17456702, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:17456684..17456702, - |
Coexpression cluster: | C3001_acute_chronic_leukemia_Mast_rhabdomyosarcoma_hereditary_CD34 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 1.07e-39 | 5 |
basophil mast progenitor cell | 1.07e-39 | 5 |
erythroid lineage cell | 2.69e-25 | 2 |
erythroblast | 2.69e-25 | 2 |
megakaryocyte-erythroid progenitor cell | 2.69e-25 | 2 |
erythroid progenitor cell | 2.69e-25 | 2 |
reticulocyte | 2.69e-25 | 2 |
proerythroblast | 2.69e-25 | 2 |
basophilic erythroblast | 2.69e-25 | 2 |
polychromatophilic erythroblast | 2.69e-25 | 2 |
orthochromatic erythroblast | 2.69e-25 | 2 |
endocrine cell | 3.00e-22 | 9 |
myeloid cell | 5.33e-15 | 108 |
common myeloid progenitor | 5.33e-15 | 108 |
CD34-positive, CD38-negative hematopoietic stem cell | 2.07e-13 | 1 |
hematopoietic stem cell | 7.76e-11 | 168 |
hematopoietic cell | 3.34e-10 | 177 |
hematopoietic oligopotent progenitor cell | 1.38e-09 | 161 |
hematopoietic multipotent progenitor cell | 1.38e-09 | 161 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 2.09e-14 | 31 |
chronic myeloid leukemia | 3.08e-14 | 1 |
leukemia | 2.20e-11 | 39 |
hematologic cancer | 1.28e-08 | 51 |
immune system cancer | 1.28e-08 | 51 |
chronic leukemia | 3.45e-07 | 8 |