FFCP PHASE1:Hg19::chr10:63805867..63805883,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:63805867..63805883,- | |||
|coexpression_cluster_id=C168 | |coexpression_cluster_id=C168 | ||
|description=CAGE_peak_at_chr10:63805867..63805883,- | |description=CAGE_peak_at_chr10:63805867..63805883,- | ||
|id=chr10:63805867..63805883,- | |id=chr10:63805867..63805883,- | ||
|ontology_enrichment_celltype=CL:0002057!4.10e-70!42;CL:0000860!9.06e-65!45;CL:0000766!6.75e-49!76;CL:0000839!1.80e-48!70;CL:0000557!1.20e-47!71;CL:0002194!1.39e-42!63;CL:0000576!1.39e-42!63;CL:0000040!1.39e-42!63;CL:0000559!1.39e-42!63;CL:0002009!5.42e-41!65;CL:0000738!3.04e-32!140;CL:0000763!1.66e-31!112;CL:0000049!1.66e-31!112;CL:0002031!1.07e-30!124;CL:0002087!9.46e-29!119;CL:0000037!2.73e-25!172;CL:0000566!2.73e-25!172;CL:0002032!5.44e-24!165;CL:0000837!5.44e-24!165;CL:0002393!1.51e-23!9;CL:0002397!1.51e-23!9;CL:0000988!3.22e-23!182;CL:0000134!4.07e-10!358;CL:0002274!7.80e-10!5;CL:0000457!7.80e-10!5;CL:0002191!7.80e-10!5;CL:0000097!7.80e-10!5;CL:0000831!7.80e-10!5;CL:0002028!7.80e-10!5;CL:0002320!1.13e-09!365;CL:0000219!1.05e-08!390;CL:0000875!1.84e-08!3;CL:0002396!1.84e-08!3;CL:0000048!7.81e-08!430;CL:0000723!1.52e-07!436;CL:0000034!3.59e-07!444 | |ontology_enrichment_celltype=CL:0002057!4.10e-70!42;CL:0000860!9.06e-65!45;CL:0000766!6.75e-49!76;CL:0000839!1.80e-48!70;CL:0000557!1.20e-47!71;CL:0002194!1.39e-42!63;CL:0000576!1.39e-42!63;CL:0000040!1.39e-42!63;CL:0000559!1.39e-42!63;CL:0002009!5.42e-41!65;CL:0000738!3.04e-32!140;CL:0000763!1.66e-31!112;CL:0000049!1.66e-31!112;CL:0002031!1.07e-30!124;CL:0002087!9.46e-29!119;CL:0000037!2.73e-25!172;CL:0000566!2.73e-25!172;CL:0002032!5.44e-24!165;CL:0000837!5.44e-24!165;CL:0002393!1.51e-23!9;CL:0002397!1.51e-23!9;CL:0000988!3.22e-23!182;CL:0000134!4.07e-10!358;CL:0002274!7.80e-10!5;CL:0000457!7.80e-10!5;CL:0002191!7.80e-10!5;CL:0000097!7.80e-10!5;CL:0000831!7.80e-10!5;CL:0002028!7.80e-10!5;CL:0002320!1.13e-09!365;CL:0000219!1.05e-08!390;CL:0000875!1.84e-08!3;CL:0002396!1.84e-08!3;CL:0000048!7.81e-08!430;CL:0000723!1.52e-07!436;CL:0000034!3.59e-07!444 | ||
|ontology_enrichment_celltype_v019=CL:0000860;8.21e-31;33!CL:0002057;8.21e-31;33!CL:0000473;8.12e-22;39!CL:0000234;8.12e-22;39!CL:0000097;3.05e-19;5!CL:0000576;1.16e-16;48!CL:0000766;4.84e-15;69!CL:0000163;6.04e-11;9!CL:0000763;1.18e-09;100!CL:0002393;1.80e-07;6!CL:0002397;1.80e-07;6!CL:0002087;2.20e-07;104!CL:0000738;7.50e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,6.86e-38,42;CL:0002057,6.86e-38,42;CL:0000839,8.48e-36,66;CL:0000557,3.08e-35,67;CL:0000473,6.37e-33,48;CL:0000234,6.37e-33,48;CL:0000766,1.14e-32,72;CL:0002194,5.83e-26,59;CL:0000576,5.83e-26,59;CL:0000040,5.83e-26,59;CL:0000559,5.83e-26,59;CL:0002009,4.62e-25,61;CL:0002031,2.26e-21,120;CL:0000763,4.11e-21,108;CL:0000049,4.11e-21,108;CL:0000738,4.53e-21,136;CL:0000097,2.87e-19,5;CL:0002028,2.87e-19,5;CL:0002087,5.96e-17,115;CL:0000037,1.36e-16,168;CL:0000988,1.27e-15,177;CL:0002032,2.49e-15,161;CL:0000837,2.49e-15,161;CL:0000163,5.85e-11,9;CL:0000134,1.48e-08,354;CL:0002320,2.47e-08,361;CL:0000219,1.49e-07,386 | |||
|ontology_enrichment_development_v019=CL:0002057;5.46e-24;42!CL:0000049;4.48e-07;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!3.86e-41!80;UBERON:0002390!6.63e-40!102;UBERON:0003061!6.63e-40!102;UBERON:0002193!3.51e-39!112;UBERON:0001474!1.49e-37!86;UBERON:0002405!5.71e-32!115;UBERON:0004765!1.89e-30!101;UBERON:0001434!1.89e-30!101;UBERON:0003081!1.85e-18!216;UBERON:0002204!1.73e-16!167;UBERON:0002384!4.51e-09!375 | |ontology_enrichment_uberon=UBERON:0002371!3.86e-41!80;UBERON:0002390!6.63e-40!102;UBERON:0003061!6.63e-40!102;UBERON:0002193!3.51e-39!112;UBERON:0001474!1.49e-37!86;UBERON:0002405!5.71e-32!115;UBERON:0004765!1.89e-30!101;UBERON:0001434!1.89e-30!101;UBERON:0003081!1.85e-18!216;UBERON:0002204!1.73e-16!167;UBERON:0002384!4.51e-09!375 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,7.45e-31,76;UBERON:0001474,1.86e-28,82;UBERON:0002390,1.02e-26,98;UBERON:0003061,1.02e-26,98;UBERON:0004765,9.41e-26,90;UBERON:0002405,7.41e-25,93;UBERON:0002193,4.83e-24,108;UBERON:0001434,5.68e-23,100;UBERON:0002204,7.59e-13,167;UBERON:0003081,1.14e-11,203;UBERON:0002384,4.95e-08,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383829398097213,0.154816123316076,0,0,0,0,0,0,0.553995408531877,1.80490002723128,0.868043482863407,0,0,0,0.145398238779565,0,0,2.09186133215116,0.822335776043652,0.619412741790207,0.28769239232215,0.768482119587302,0.709446689665756,3.44745680736619,0,2.70852973188684,0.752969358170419,0.818718450173537,1.12361742222542,2.75475503133812,1.28371610830437,3.19668562899521,0,0,0,0.870627715885752,0.56738522469114,2.4912889959823,1.00499466102697,0,0.65156653411535,0,1.47311054395026,0.316462387440884,0.422510572623884,1.4882300997553,0.419317291016752,1.68492946719743,0.600707571366025,0.64290234678832,0.285012743741249,0.39783335439818,0.365328307529268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0.411202997999018,0.167186495390678,0,0,0,0.334231370655521,0,0,0.270803863765016,0.25618263945135,0.390178042679635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24930726552346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0.264145302039678,4.35389042635621,3.60299883542404,4.4184851699233,0,0.381988425558278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72571360654893,0.640365346820666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35667105148125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540031437238115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.390776190804081,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.442306057399416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429226048136571,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496166021811951,0,0.243585196761792,0,0.544017803369474,0.5013797880454,1.53172788381731,1.63936315354902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.175871244359621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0.0645889098360061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0,0,0.201273793591026,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383829398097213,0.154816123316076,0,0,0,0,0,0,0.553995408531877,1.80490002723128,0.868043482863407,0,0,0,0.145398238779565,0,0,2.09186133215116,0.822335776043652,0.619412741790207,0.28769239232215,0.768482119587302,0.709446689665756,3.44745680736619,0,2.70852973188684,0.752969358170419,0.818718450173537,1.12361742222542,2.75475503133812,1.28371610830437,3.19668562899521,0,0,0,0.870627715885752,0.56738522469114,2.4912889959823,1.00499466102697,0,0.65156653411535,0,1.47311054395026,0.316462387440884,0.422510572623884,1.4882300997553,0.419317291016752,1.68492946719743,0.600707571366025,0.64290234678832,0.285012743741249,0.39783335439818,0.365328307529268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0.411202997999018,0.167186495390678,0,0,0,0.334231370655521,0,0,0.270803863765016,0.25618263945135,0.390178042679635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24930726552346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0.264145302039678,4.35389042635621,3.60299883542404,4.4184851699233,0,0.381988425558278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72571360654893,0.640365346820666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35667105148125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540031437238115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.390776190804081,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.442306057399416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429226048136571,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496166021811951,0,0.243585196761792,0,0.544017803369474,0.5013797880454,1.53172788381731,1.63936315354902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.175871244359621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0.0645889098360061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0,0,0.201273793591026,0 | ||
|short_description=p@chr10:63805867..63805883,- | |short_description=p@chr10:63805867..63805883,- | ||
}} | }} |
Latest revision as of 14:36, 23 July 2015
Short description: | p@chr10:63805867..63805883, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:63805867..63805883, - |
Coexpression cluster: | C168_Mast_CD14_immature_Basophils_Eosinophils_CD34_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 6.86e-38 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.86e-38 | 42 |
myeloid lineage restricted progenitor cell | 8.48e-36 | 66 |
granulocyte monocyte progenitor cell | 3.08e-35 | 67 |
defensive cell | 6.37e-33 | 48 |
phagocyte | 6.37e-33 | 48 |
myeloid leukocyte | 1.14e-32 | 72 |
monopoietic cell | 5.83e-26 | 59 |
monocyte | 5.83e-26 | 59 |
monoblast | 5.83e-26 | 59 |
promonocyte | 5.83e-26 | 59 |
macrophage dendritic cell progenitor | 4.62e-25 | 61 |
hematopoietic lineage restricted progenitor cell | 2.26e-21 | 120 |
myeloid cell | 4.11e-21 | 108 |
common myeloid progenitor | 4.11e-21 | 108 |
leukocyte | 4.53e-21 | 136 |
mast cell | 2.87e-19 | 5 |
basophil mast progenitor cell | 2.87e-19 | 5 |
nongranular leukocyte | 5.96e-17 | 115 |
hematopoietic stem cell | 1.36e-16 | 168 |
hematopoietic cell | 1.27e-15 | 177 |
hematopoietic oligopotent progenitor cell | 2.49e-15 | 161 |
hematopoietic multipotent progenitor cell | 2.49e-15 | 161 |
endocrine cell | 5.85e-11 | 9 |
mesenchymal cell | 1.48e-08 | 354 |
connective tissue cell | 2.47e-08 | 361 |
motile cell | 1.49e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 7.45e-31 | 76 |
bone element | 1.86e-28 | 82 |
hematopoietic system | 1.02e-26 | 98 |
blood island | 1.02e-26 | 98 |
skeletal element | 9.41e-26 | 90 |
immune system | 7.41e-25 | 93 |
hemolymphoid system | 4.83e-24 | 108 |
skeletal system | 5.68e-23 | 100 |
musculoskeletal system | 7.59e-13 | 167 |
lateral plate mesoderm | 1.14e-11 | 203 |
connective tissue | 4.95e-08 | 371 |