FFCP PHASE1:Hg19::chr10:77392566..77392570,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:77392566..77392570,+ | |||
|coexpression_cluster_id=C3048 | |coexpression_cluster_id=C3048 | ||
|description=CAGE_peak_at_chr10:77392566..77392570,+ | |description=CAGE_peak_at_chr10:77392566..77392570,+ | ||
|id=chr10:77392566..77392570,+ | |id=chr10:77392566..77392570,+ | ||
|ontology_enrichment_celltype=CL:0000557!2.56e-25!71;CL:0000839!3.88e-25!70;CL:0002194!1.41e-24!63;CL:0000576!1.41e-24!63;CL:0000040!1.41e-24!63;CL:0000559!1.41e-24!63;CL:0000766!3.00e-24!76;CL:0002009!5.30e-24!65;CL:0000860!3.85e-23!45;CL:0002057!1.06e-22!42;CL:0000763!8.03e-22!112;CL:0000049!8.03e-22!112;CL:0000037!2.31e-09!172;CL:0000566!2.31e-09!172;CL:0002032!9.40e-09!165;CL:0000837!9.40e-09!165;CL:0000988!1.02e-08!182;CL:0000738!1.11e-08!140;CL:0002087!6.36e-08!119;CL:0002031!6.42e-08!124;CL:0002393!8.29e-07!9;CL:0002397!8.29e-07!9 | |ontology_enrichment_celltype=CL:0000557!2.56e-25!71;CL:0000839!3.88e-25!70;CL:0002194!1.41e-24!63;CL:0000576!1.41e-24!63;CL:0000040!1.41e-24!63;CL:0000559!1.41e-24!63;CL:0000766!3.00e-24!76;CL:0002009!5.30e-24!65;CL:0000860!3.85e-23!45;CL:0002057!1.06e-22!42;CL:0000763!8.03e-22!112;CL:0000049!8.03e-22!112;CL:0000037!2.31e-09!172;CL:0000566!2.31e-09!172;CL:0002032!9.40e-09!165;CL:0000837!9.40e-09!165;CL:0000988!1.02e-08!182;CL:0000738!1.11e-08!140;CL:0002087!6.36e-08!119;CL:0002031!6.42e-08!124;CL:0002393!8.29e-07!9;CL:0002397!8.29e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0000576;1.78e-18;48!CL:0000860;1.16e-15;33!CL:0002057;1.16e-15;33!CL:0000473;2.32e-14;39!CL:0000234;2.32e-14;39!CL:0000766;7.14e-13;69!CL:0000763;1.70e-08;100!CL:0002619;3.65e-08;3!CL:0000097;1.01e-07;5!CL:0002393;3.24e-07;6!CL:0002397;3.24e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000839,3.80e-32,66;CL:0000557,1.58e-31,67;CL:0000766,7.45e-31,72;CL:0002194,6.12e-28,59;CL:0000576,6.12e-28,59;CL:0000040,6.12e-28,59;CL:0000559,6.12e-28,59;CL:0000763,6.24e-28,108;CL:0000049,6.24e-28,108;CL:0002009,9.37e-27,61;CL:0000473,2.04e-20,48;CL:0000234,2.04e-20,48;CL:0000860,5.89e-20,42;CL:0002057,5.89e-20,42;CL:0002032,5.05e-16,161;CL:0000837,5.05e-16,161;CL:0000037,7.72e-16,168;CL:0002031,1.23e-14,120;CL:0000988,1.88e-14,177;CL:0000738,7.71e-14,136;CL:0002087,2.14e-12,115;CL:0002619,4.66e-08,3;CL:0000097,9.85e-08,5;CL:0002028,9.85e-08,5 | |||
|ontology_enrichment_development_v019=CL:0002057;1.25e-14;42!CL:0000049;1.34e-08;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002405!2.31e-21!115;UBERON:0002193!4.22e-21!112;UBERON:0002371!1.16e-20!80;UBERON:0002390!4.00e-20!102;UBERON:0003061!4.00e-20!102;UBERON:0001474!4.35e-19!86;UBERON:0004765!4.54e-15!101;UBERON:0001434!4.54e-15!101;UBERON:0007023!9.48e-12!115 | |ontology_enrichment_uberon=UBERON:0002405!2.31e-21!115;UBERON:0002193!4.22e-21!112;UBERON:0002371!1.16e-20!80;UBERON:0002390!4.00e-20!102;UBERON:0003061!4.00e-20!102;UBERON:0001474!4.35e-19!86;UBERON:0004765!4.54e-15!101;UBERON:0001434!4.54e-15!101;UBERON:0007023!9.48e-12!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0006947;3.65e-08;3!UBERON:0004054;3.65e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.11e-26,76;UBERON:0002405,8.54e-25,93;UBERON:0001474,4.80e-24,82;UBERON:0002193,1.06e-22,108;UBERON:0002390,2.23e-21,98;UBERON:0003061,2.23e-21,98;UBERON:0004765,4.42e-21,90;UBERON:0001434,4.71e-18,100;UBERON:0003081,4.79e-10,203;UBERON:0002204,4.16e-08,167;UBERON:0006947,5.01e-08,3;UBERON:0004054,5.01e-08,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0.458480434487708,0,0.157421562627358,0.393364276848904,0,0.154816123316076,0,0,0,0,0,0.587200878669695,4.43196326825502,3.40925560699241,3.90619567288533,2.23915474239924,1.29557466407592,2.06060454107349,0.872389432677388,1.51150377475524,2.18325655069035,0.464858073811369,1.6446715520873,1.85823822537062,0.28769239232215,1.0246428261164,0.945928919554341,0,1.93645405075148,4.06279459783025,0.564727018627814,1.09162460023138,1.57306439111559,0.306083892370903,0.320929027076094,0.639337125799041,0,0.398927315243264,1.70489900213078,0.870627715885752,0.56738522469114,2.4912889959823,0.502497330513487,2.08593167368081,0.65156653411535,1.21079900526674,2.20966581592539,0.949387162322653,0.633765858935825,0.425208599930087,1.04829322754188,1.90958672949042,1.65194582125657,2.08943262706204,0.855038231223746,0.79566670879636,0.547992461293902,0,0,0,0,0,0,0,0,0,0,0,0,1.12101712596307,0.790152254325231,0,0,0,0.167186495390678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,1.11332214173056,0,0,2.92092654289215,1.21890816109487,0.26591592103773,0,0,0,0.198762407366705,0,0,0,0,0,0,0.775250277507987,1.77883131343355,1.67360306382335,0,0,0,0,0,0.714397826272638,0.22452937262617,0.225222960966644,0,0,0.366403487860815,0,0,0,0,0,0,0.286836620748814,0,0,1.06748995729705,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0.204154171254893,0.245668634623536,0,0,0,0,0,0,0.125118519871964,0,0,0,0.150238058906597,0,0,0,0,0,0,0.257640540045629,0.18611685633159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.60530208930985,0.982827216677626,1.77236972004421,0,0.368965315629341,0,0,0,0,0,0,0,0,0,0,0,0,1.90254152234598,0,0,1.96973604869918,0.702012795417713,1.0404181360211,0.93733833986777,0,0,0.0895585227028483,0,0,0,1.58487181223807,1.65862492432618,2.16179930125442,1.13618190083742,0.444485260045183,0.381988425558278,0,0,0.102827492703324,0,1.14330573052231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0.215627574859517,0.256686072559497,0,0,0,0,0,0,2.99161459204025,0,0.12269149171914,0,0,0.415941723061614,0,0.157702415033935,0.234282829985426,0,0,0,0,0,0,0,0,0.82707210449155,1.2942852049117,0.960548020230999,0,0,0,0.248107807818777,0.306923946576125,0,0.128139149255701,0,0,0,0,0.177561725313127,0,0.519254429183621,0,0.241718899183244,0,0,0,0,0.131124414959424,0,0.0770153371044148,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,1.03041011647722,0.0915694648183434,0.907604499126468,0,0,0,0,0.154048617114644,0,0,0.107420244868274,0,0.0852266274161009,0,0,0.192190067365106,1.27612712494584,0.2023155617111,0,0.31481234683064,0,0,0,0.869932992075073,0,0.143124886741991,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0.66343897524122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.69458841398202,0,0,0,0,0,0,0.569647187174163,0,0.411362273086194,0,1.62009431171434,0,0,0,0,0,0,0.142283686696828,0,0,0,0.846694330895531,2.59697552219644,3.08876895924805,0.228234679033192,0.156679895773023,20.0507581672054,0,0,1.00899853595524,3.83261613921294,3.09154810280188,1.84344458585075,0.223676107892416,1.16794399198336,0.19538809540204,0,0,0,0,0,0,0.439524537815682,0,0,0,0.47748896947538,0,0,0,0.703347082052564,0.111308705022906,0,0,1.9924798825107,1.65770349318689,0,0,1.72318727645497,0.311039587661807,0,0.537063524026827,1.53471711068062,0.394573622547734,0,0,0,0.185536196323703,0,0,0,0,0,0,0.236387681767936,0.344743373241465,0,0.173624994933292,0.885741385813839,0.482385754501632,0,0.331737779793674,0,0.219385397153973,0.10893846351899,0,0.615602068030377,0.455768223388005,0.46112780877612,0,0.760531603454056,0,0,0.533034776018635,0,0.156980256395025,0.664846727600626,0,0,0,0,0.158936578980379,0,0.489698424477443,0,0.216388639742091,0.995261931078505,0.442287822516696,0,0.889563386041866,0.617819694732514,0.208843899010911,0.404406797884062,0.802577647298789,0,0,0,0,2.36750641709634,2.41981432097328,0,1.26373159256976,0.300646838828985,0,0,0.330991955875499,0,0,0.853828638089378,0,0,0,0.174118413160805,1.04836000945218,0.171986032471617,0.483781656445426,0.292357268344742,0.0821154570532092,0,0,0.225980740780532,0,0,0.189932387867636,0.391102765469606,0.480952921509202,1.06726497369676,0,0.144090417154106,0,1.20116498503375,0,0.372757606696298,0,0,0,0,0,0,1.09524303113594,0,0.429765441419957,0,1.11712960508902,0.916641696046735,1.43574604915363,0,0,0,0.604651252380536,0,1.16495949527454,0.709048640765013,0.412079291905832,0.741438982396034,0.295282444544246,0,0,0.136203406111576,0,0,0,0.2249738915515,0,0.182248669974074,0,0.236417121897595,0.367182116944987,0,0,0,0,0,0.25426853765475,0,0,0,0,0,0.170388021785422,0.113312091520126,0.146552233678082,0,0.775697738169303,0.52893040697076,0.684347351537318,0,0.106787412567695,2.20086027139532,1.65695622138878,0.496166021811951,0,0,0,1.08803560673895,1.002759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| ||
|short_description=p@chr10:77392566..77392570,+ | |short_description=p@chr10:77392566..77392570,+ | ||
}} | }} |
Latest revision as of 15:44, 23 July 2015
Short description: | p@chr10:77392566..77392570, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:77392566..77392570, + |
Coexpression cluster: | C3048_acute_Hepatocyte_duodenum_CD14_hepatoblastoma_myelodysplastic_thyroid |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid lineage restricted progenitor cell | 3.80e-32 | 66 |
granulocyte monocyte progenitor cell | 1.58e-31 | 67 |
myeloid leukocyte | 7.45e-31 | 72 |
monopoietic cell | 6.12e-28 | 59 |
monocyte | 6.12e-28 | 59 |
monoblast | 6.12e-28 | 59 |
promonocyte | 6.12e-28 | 59 |
myeloid cell | 6.24e-28 | 108 |
common myeloid progenitor | 6.24e-28 | 108 |
macrophage dendritic cell progenitor | 9.37e-27 | 61 |
defensive cell | 2.04e-20 | 48 |
phagocyte | 2.04e-20 | 48 |
classical monocyte | 5.89e-20 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.89e-20 | 42 |
hematopoietic oligopotent progenitor cell | 5.05e-16 | 161 |
hematopoietic multipotent progenitor cell | 5.05e-16 | 161 |
hematopoietic stem cell | 7.72e-16 | 168 |
hematopoietic lineage restricted progenitor cell | 1.23e-14 | 120 |
hematopoietic cell | 1.88e-14 | 177 |
leukocyte | 7.71e-14 | 136 |
nongranular leukocyte | 2.14e-12 | 115 |
adult endothelial progenitor cell | 4.66e-08 | 3 |
mast cell | 9.85e-08 | 5 |
basophil mast progenitor cell | 9.85e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.11e-26 | 76 |
immune system | 8.54e-25 | 93 |
bone element | 4.80e-24 | 82 |
hemolymphoid system | 1.06e-22 | 108 |
hematopoietic system | 2.23e-21 | 98 |
blood island | 2.23e-21 | 98 |
skeletal element | 4.42e-21 | 90 |
skeletal system | 4.71e-18 | 100 |
lateral plate mesoderm | 4.79e-10 | 203 |
musculoskeletal system | 4.16e-08 | 167 |
male genital duct | 5.01e-08 | 3 |
internal male genitalia | 5.01e-08 | 3 |