FFCP PHASE1:Hg19::chr17:7741542..7741546,-: Difference between revisions
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|id=chr17:7741542..7741546,-
|short_description=p@chr17:7741542..7741546,-
|description=CAGE_peak_at_chr17:7741542..7741546,-
|association_with_transcript=NA
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr17:7741542..7741546,- | |||
|description=CAGE_peak_at_chr17:7741542..7741546,- | |||
|id=chr17:7741542..7741546,- | |||
|ontology_enrichment_celltype=CL:0002057!8.31e-35!42;CL:0000860!8.90e-32!45;CL:0000766!3.02e-24!76;CL:0002194!6.12e-21!63;CL:0000576!6.12e-21!63;CL:0000040!6.12e-21!63;CL:0000559!6.12e-21!63;CL:0000839!8.91e-21!70;CL:0000557!2.45e-20!71;CL:0002009!5.41e-20!65;CL:0000738!2.70e-19!140;CL:0002031!5.81e-16!124;CL:0002087!6.00e-16!119;CL:0000763!1.20e-15!112;CL:0000049!1.20e-15!112;CL:0000037!1.97e-15!172;CL:0000566!1.97e-15!172;CL:0000988!1.69e-14!182;CL:0002032!3.32e-14!165;CL:0000837!3.32e-14!165;CL:0000134!2.52e-07!358;CL:0000219!3.53e-07!390;CL:0002320!7.26e-07!365 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.60e-37;33!CL:0002057;1.60e-37;33!CL:0000473;3.80e-25;39!CL:0000234;3.80e-25;39!CL:0000576;4.64e-17;48!CL:0000766;4.45e-13;69!CL:0000763;3.01e-07;100!CL:0000771;4.69e-07;2!CL:0002262;9.53e-07;2!CL:1000398;9.53e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,4.85e-30,42;CL:0002057,4.85e-30,42;CL:0000473,4.11e-26,48;CL:0000234,4.11e-26,48;CL:0000766,1.14e-23,72;CL:0002194,1.32e-20,59;CL:0000576,1.32e-20,59;CL:0000040,1.32e-20,59;CL:0000559,1.32e-20,59;CL:0002009,6.76e-20,61;CL:0000839,2.65e-18,66;CL:0000557,5.17e-18,67;CL:0000763,2.90e-15,108;CL:0000049,2.90e-15,108;CL:0000738,9.12e-12,136;CL:0002087,6.18e-10,115;CL:0002032,1.17e-09,161;CL:0000837,1.17e-09,161;CL:0002031,1.84e-09,120;CL:0000037,3.52e-09,168;CL:0000988,1.28e-08,177;CL:0000771,4.56e-07,2;CL:0002262,8.06e-07,2;CL:1000398,8.06e-07,2 | |||
|ontology_enrichment_development_v019=CL:0002057;1.18e-21;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.34e-24!102;UBERON:0003061!2.34e-24!102;UBERON:0002193!3.66e-22!112;UBERON:0001474!8.92e-21!86;UBERON:0002371!1.08e-20!80;UBERON:0002405!1.54e-16!115;UBERON:0004765!5.69e-16!101;UBERON:0001434!5.69e-16!101;UBERON:0003081!4.85e-09!216;UBERON:0002204!6.88e-09!167 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;9.53e-07;2!UBERON:0001281;9.53e-07;2!UBERON:0003497;9.53e-07;2!UBERON:0003909;9.53e-07;2!UBERON:0005058;9.53e-07;2!UBERON:0003835;9.53e-07;2!UBERON:0009113;9.53e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,5.96e-17,98;UBERON:0003061,5.96e-17,98;UBERON:0002371,9.79e-16,76;UBERON:0002193,3.14e-15,108;UBERON:0002405,3.83e-15,93;UBERON:0001474,1.72e-14,82;UBERON:0004765,4.38e-13,90;UBERON:0001434,1.22e-11,100;UBERON:0003081,1.36e-08,203;UBERON:0001281,8.06e-07,2;UBERON:0003497,8.06e-07,2;UBERON:0003909,8.06e-07,2;UBERON:0003835,8.06e-07,2 | |||
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| ||
|short_description=p@chr17:7741542..7741546,- | |||
}} | }} |
Latest revision as of 22:16, 25 July 2015
Short description: | p@chr17:7741542..7741546, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:7741542..7741546, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 4.85e-30 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.85e-30 | 42 |
defensive cell | 4.11e-26 | 48 |
phagocyte | 4.11e-26 | 48 |
myeloid leukocyte | 1.14e-23 | 72 |
monopoietic cell | 1.32e-20 | 59 |
monocyte | 1.32e-20 | 59 |
monoblast | 1.32e-20 | 59 |
promonocyte | 1.32e-20 | 59 |
macrophage dendritic cell progenitor | 6.76e-20 | 61 |
myeloid lineage restricted progenitor cell | 2.65e-18 | 66 |
granulocyte monocyte progenitor cell | 5.17e-18 | 67 |
myeloid cell | 2.90e-15 | 108 |
common myeloid progenitor | 2.90e-15 | 108 |
leukocyte | 9.12e-12 | 136 |
nongranular leukocyte | 6.18e-10 | 115 |
hematopoietic oligopotent progenitor cell | 1.17e-09 | 161 |
hematopoietic multipotent progenitor cell | 1.17e-09 | 161 |
hematopoietic lineage restricted progenitor cell | 1.84e-09 | 120 |
hematopoietic stem cell | 3.52e-09 | 168 |
hematopoietic cell | 1.28e-08 | 177 |
eosinophil | 4.56e-07 | 2 |
endothelial cell of sinusoid | 8.06e-07 | 2 |
endothelial cell of hepatic sinusoid | 8.06e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 5.96e-17 | 98 |
blood island | 5.96e-17 | 98 |
bone marrow | 9.79e-16 | 76 |
hemolymphoid system | 3.14e-15 | 108 |
immune system | 3.83e-15 | 93 |
bone element | 1.72e-14 | 82 |
skeletal element | 4.38e-13 | 90 |
skeletal system | 1.22e-11 | 100 |
lateral plate mesoderm | 1.36e-08 | 203 |
hepatic sinusoid | 8.06e-07 | 2 |
abdomen blood vessel | 8.06e-07 | 2 |
sinusoid | 8.06e-07 | 2 |
abdominal segment blood vessel | 8.06e-07 | 2 |