FFCP PHASE1:Hg19::chr17:78261803..78261813,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr17:78261803..78261813,+
|short_description=p8@RNF213
|description=CAGE_peak_8_at_RNF213_5end
|association_with_transcript=45bp_to_ENST00000559070_5end
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=57674 | |EntrezGene=57674 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14539 | |HGNC=14539 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=45bp_to_ENST00000559070_5end | |||
|cluster_id=chr17:78261803..78261813,+ | |||
|coexpression_cluster_id=C67 | |||
|description=CAGE_peak_8_at_RNF213_5end | |||
|id=chr17:78261803..78261813,+ | |||
|ontology_enrichment_celltype=CL:0002194!1.63e-11!63;CL:0000576!1.63e-11!63;CL:0000040!1.63e-11!63;CL:0000559!1.63e-11!63;CL:0002009!6.05e-11!65;CL:0002087!7.55e-11!119;CL:0000839!1.14e-09!70;CL:0000557!1.94e-09!71;CL:0002031!1.47e-08!124;CL:0000766!2.22e-08!76;CL:0000738!9.23e-08!140;CL:0002619!3.99e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002619;6.25e-85;3!CL:0000235;6.22e-75;6!CL:0000766;9.27e-11;69!CL:0000473;1.46e-09;39!CL:0000234;1.46e-09;39!CL:0000115;1.99e-07;36!CL:0000763;3.27e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0002619,7.21e-85,3;CL:0000235,5.66e-75,6;CL:0002194,2.92e-23,59;CL:0000576,2.92e-23,59;CL:0000040,2.92e-23,59;CL:0000559,2.92e-23,59;CL:0002009,1.60e-22,61;CL:0000839,7.23e-21,66;CL:0000557,1.45e-20,67;CL:0000766,3.53e-19,72;CL:0000763,6.23e-13,108;CL:0000049,6.23e-13,108;CL:0002087,3.65e-12,115;CL:0002031,1.14e-11,120;CL:0000738,2.51e-10,136;CL:0000473,6.46e-10,48;CL:0000234,6.46e-10,48;CL:0002032,9.40e-09,161;CL:0000837,9.40e-09,161;CL:0000037,2.15e-08,168;CL:0000988,5.65e-08,177;CL:0000115,8.34e-08,36 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!9.29e-10!102;UBERON:0003061!9.29e-10!102;UBERON:0002193!1.27e-09!112;UBERON:0007023!1.69e-08!115;UBERON:0002371!2.12e-08!80;UBERON:0002405!1.00e-07!115;UBERON:0001474!2.39e-07!86 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.37e-18,76;UBERON:0001474,6.63e-17,82;UBERON:0004765,1.92e-15,90;UBERON:0002405,5.86e-15,93;UBERON:0002390,3.24e-14,98;UBERON:0003061,3.24e-14,98;UBERON:0001434,6.14e-14,100;UBERON:0002193,6.23e-13,108;UBERON:0002204,1.92e-08,167;UBERON:0003081,5.76e-07,203 | |||
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| ||
|short_description=p8@RNF213 | |||
}} | }} |
Latest revision as of 03:55, 18 September 2015
Short description: | p8@RNF213 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_RNF213_5end |
Coexpression cluster: | C67_CD14_Monocytederived_Macrophage_dura_Dendritic_spleen_lung |
Association with transcript: | 45bp_to_ENST00000559070_5end |
EntrezGene: | RNF213 |
HGNC: | 14539 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult endothelial progenitor cell | 7.21e-85 | 3 |
macrophage | 5.66e-75 | 6 |
monopoietic cell | 2.92e-23 | 59 |
monocyte | 2.92e-23 | 59 |
monoblast | 2.92e-23 | 59 |
promonocyte | 2.92e-23 | 59 |
macrophage dendritic cell progenitor | 1.60e-22 | 61 |
myeloid lineage restricted progenitor cell | 7.23e-21 | 66 |
granulocyte monocyte progenitor cell | 1.45e-20 | 67 |
myeloid leukocyte | 3.53e-19 | 72 |
myeloid cell | 6.23e-13 | 108 |
common myeloid progenitor | 6.23e-13 | 108 |
nongranular leukocyte | 3.65e-12 | 115 |
hematopoietic lineage restricted progenitor cell | 1.14e-11 | 120 |
leukocyte | 2.51e-10 | 136 |
defensive cell | 6.46e-10 | 48 |
phagocyte | 6.46e-10 | 48 |
hematopoietic oligopotent progenitor cell | 9.40e-09 | 161 |
hematopoietic multipotent progenitor cell | 9.40e-09 | 161 |
hematopoietic stem cell | 2.15e-08 | 168 |
hematopoietic cell | 5.65e-08 | 177 |
endothelial cell | 8.34e-08 | 36 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.37e-18 | 76 |
bone element | 6.63e-17 | 82 |
skeletal element | 1.92e-15 | 90 |
immune system | 5.86e-15 | 93 |
hematopoietic system | 3.24e-14 | 98 |
blood island | 3.24e-14 | 98 |
skeletal system | 6.14e-14 | 100 |
hemolymphoid system | 6.23e-13 | 108 |
musculoskeletal system | 1.92e-08 | 167 |
lateral plate mesoderm | 5.76e-07 | 203 |