FFCP PHASE1:Hg19::chr11:560958..561046,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8045 | |EntrezGene=8045 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1166 | |HGNC=1166 | ||
|TSSclassifier=strong | |||
|UniProt=Q02833,F8W7Q0 | |UniProt=Q02833,F8W7Q0 | ||
|association_with_transcript=0bp_to_ENST00000344375,ENST00000414138,ENST00000524468,NM_001143993,uc001lqb.2_5end | |association_with_transcript=0bp_to_ENST00000344375,ENST00000414138,ENST00000524468,NM_001143993,uc001lqb.2_5end | ||
|cluster_id=chr11:560958..561046,+ | |||
|coexpression_cluster_id=C2136 | |coexpression_cluster_id=C2136 | ||
|description=CAGE_peak_1_at_RASSF7_5end | |description=CAGE_peak_1_at_RASSF7_5end | ||
|id=chr11:560958..561046,+ | |id=chr11:560958..561046,+ | ||
|ontology_enrichment_celltype=CL:0000066!5.57e-33!254;CL:0000223!2.93e-12!59;CL:0002076!4.47e-11!43;CL:0000791!2.56e-07!18;CL:0000789!2.56e-07!18;CL:0002420!2.56e-07!18;CL:0002419!2.56e-07!18;CL:0000790!2.56e-07!18;CL:0000838!6.43e-07!52;CL:0000542!8.96e-07!53;CL:0000051!8.96e-07!53 | |ontology_enrichment_celltype=CL:0000066!5.57e-33!254;CL:0000223!2.93e-12!59;CL:0002076!4.47e-11!43;CL:0000791!2.56e-07!18;CL:0000789!2.56e-07!18;CL:0002420!2.56e-07!18;CL:0002419!2.56e-07!18;CL:0000790!2.56e-07!18;CL:0000838!6.43e-07!52;CL:0000542!8.96e-07!53;CL:0000051!8.96e-07!53 | ||
|ontology_enrichment_celltype_v019=CL:0002076;7.31e-09;42!CL:1000497;7.72e-08;17!CL:0002518;7.72e-08;17!CL:1000507;1.84e-07;10!CL:1000494;1.84e-07;10!CL:0000791;2.46e-07;18!CL:0000789;2.46e-07;18!CL:0002419;2.46e-07;18!CL:1000449;4.55e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.07e-33,253;CL:0000223,4.97e-13,58;CL:0002076,6.12e-12,42;CL:1000497,9.04e-08,17;CL:0002518,9.04e-08,17;CL:1000507,2.09e-07,10;CL:1000494,2.09e-07,10;CL:0000791,2.37e-07,18;CL:0000789,2.37e-07,18;CL:0002420,2.37e-07,18;CL:0002419,2.37e-07,18;CL:0000790,2.37e-07,18;CL:1000449,5.21e-07,15;CL:0000838,5.98e-07,52;CL:0000542,8.34e-07,53;CL:0000051,8.34e-07,53 | |||
|ontology_enrichment_development_v019=CL:0000223;1.93e-07;58!CL:0000790;2.46e-07;18 | |||
|ontology_enrichment_disease=DOID:305!5.48e-12!106;DOID:162!1.34e-08!235;DOID:0050687!1.66e-08!143;DOID:299!7.67e-08!25;DOID:14566!1.03e-07!239 | |ontology_enrichment_disease=DOID:305!5.48e-12!106;DOID:162!1.34e-08!235;DOID:0050687!1.66e-08!143;DOID:299!7.67e-08!25;DOID:14566!1.03e-07!239 | ||
|ontology_enrichment_disease_v019=DOID:299;5.95e-08;25 | |||
|ontology_enrichment_disease_v019_2=DOID:305,5.96e-12,106;DOID:0050687,1.93e-08,143;DOID:162,2.00e-08,235;DOID:299,7.04e-08,25;DOID:14566,1.63e-07,239 | |||
|ontology_enrichment_uberon=UBERON:0004119!6.95e-11!169;UBERON:0000925!6.95e-11!169;UBERON:0006595!6.95e-11!169;UBERON:0005172!1.96e-09!55;UBERON:0005173!1.96e-09!55;UBERON:0004921!2.03e-09!129;UBERON:0004185!2.03e-09!129;UBERON:0005911!4.04e-09!82;UBERON:0001008!8.18e-09!45;UBERON:0006554!1.41e-08!44;UBERON:0000058!8.15e-08!26;UBERON:0005631!1.06e-07!14;UBERON:0000158!1.06e-07!14;UBERON:0000077!1.21e-07!130;UBERON:0001007!1.27e-07!155;UBERON:0001555!1.27e-07!155;UBERON:0007026!1.27e-07!155;UBERON:0002113!1.67e-07!27;UBERON:0003918!1.67e-07!27;UBERON:0005095!1.67e-07!27;UBERON:0007687!1.67e-07!27;UBERON:0005177!3.73e-07!107;UBERON:0001041!7.54e-07!98;UBERON:0009569!9.80e-07!113;UBERON:0002417!9.87e-07!61;UBERON:0000916!9.87e-07!61 | |ontology_enrichment_uberon=UBERON:0004119!6.95e-11!169;UBERON:0000925!6.95e-11!169;UBERON:0006595!6.95e-11!169;UBERON:0005172!1.96e-09!55;UBERON:0005173!1.96e-09!55;UBERON:0004921!2.03e-09!129;UBERON:0004185!2.03e-09!129;UBERON:0005911!4.04e-09!82;UBERON:0001008!8.18e-09!45;UBERON:0006554!1.41e-08!44;UBERON:0000058!8.15e-08!26;UBERON:0005631!1.06e-07!14;UBERON:0000158!1.06e-07!14;UBERON:0000077!1.21e-07!130;UBERON:0001007!1.27e-07!155;UBERON:0001555!1.27e-07!155;UBERON:0007026!1.27e-07!155;UBERON:0002113!1.67e-07!27;UBERON:0003918!1.67e-07!27;UBERON:0005095!1.67e-07!27;UBERON:0007687!1.67e-07!27;UBERON:0005177!3.73e-07!107;UBERON:0001041!7.54e-07!98;UBERON:0009569!9.80e-07!113;UBERON:0002417!9.87e-07!61;UBERON:0000916!9.87e-07!61 | ||
|ontology_enrichment_uberon_v019=UBERON:0006554;6.19e-10;30!UBERON:0001008;6.19e-10;30!UBERON:0002113;8.59e-08;24!UBERON:0011143;8.59e-08;24!UBERON:0004211;1.84e-07;10!UBERON:0009773;1.84e-07;10!UBERON:0001231;1.84e-07;10!UBERON:0004810;1.84e-07;10!UBERON:0006555;4.55e-07;15!UBERON:0004819;4.55e-07;15!UBERON:0001285;4.55e-07;15!UBERON:0007684;4.55e-07;15!UBERON:0005172;6.20e-07;52!UBERON:0005173;6.20e-07;52 | |||
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| ||
|short_description=p1@RASSF7 | |short_description=p1@RASSF7 | ||
}} | }} |
Latest revision as of 08:11, 18 September 2015
Short description: | p1@RASSF7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RASSF7_5end |
Coexpression cluster: | C2136_Alveolar_serous_Placental_Renal_amniotic_Small_Mammary |
Association with transcript: | 0bp_to_ENST00000344375, ENST00000414138, ENST00000524468, NM_001143993, uc001lqb.2_5end |
EntrezGene: | RASSF7 |
HGNC: | 1166 |
UniProt: | Q02833F8W7Q0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.07e-33 | 253 |
endodermal cell | 4.97e-13 | 58 |
endo-epithelial cell | 6.12e-12 | 42 |
kidney cell | 9.04e-08 | 17 |
kidney epithelial cell | 9.04e-08 | 17 |
kidney tubule cell | 2.09e-07 | 10 |
nephron tubule epithelial cell | 2.09e-07 | 10 |
mature alpha-beta T cell | 2.37e-07 | 18 |
alpha-beta T cell | 2.37e-07 | 18 |
immature T cell | 2.37e-07 | 18 |
mature T cell | 2.37e-07 | 18 |
immature alpha-beta T cell | 2.37e-07 | 18 |
epithelial cell of nephron | 5.21e-07 | 15 |
lymphoid lineage restricted progenitor cell | 5.98e-07 | 52 |
lymphocyte | 8.34e-07 | 53 |
common lymphoid progenitor | 8.34e-07 | 53 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 9.75e-12 | 160 |
endoderm | 9.75e-12 | 160 |
presumptive endoderm | 9.75e-12 | 160 |
renal system | 3.67e-11 | 48 |
subdivision of digestive tract | 5.62e-11 | 118 |
urinary system structure | 6.49e-11 | 47 |
abdomen element | 3.06e-10 | 54 |
abdominal segment element | 3.06e-10 | 54 |
trunk region element | 5.63e-09 | 101 |
endo-epithelium | 6.75e-09 | 82 |
digestive system | 1.21e-08 | 145 |
digestive tract | 1.21e-08 | 145 |
primitive gut | 1.21e-08 | 145 |
kidney | 1.51e-08 | 26 |
kidney mesenchyme | 1.51e-08 | 26 |
upper urinary tract | 1.51e-08 | 26 |
kidney rudiment | 1.51e-08 | 26 |
kidney field | 1.51e-08 | 26 |
foregut | 1.64e-08 | 87 |
extraembryonic membrane | 9.73e-08 | 14 |
membranous layer | 9.73e-08 | 14 |
excretory tube | 1.89e-07 | 16 |
kidney epithelium | 1.89e-07 | 16 |
nephron tubule epithelium | 2.09e-07 | 10 |
abdominal segment of trunk | 2.58e-07 | 60 |
abdomen | 2.58e-07 | 60 |
subdivision of trunk | 3.99e-07 | 112 |
nephron epithelium | 5.21e-07 | 15 |
renal tubule | 5.21e-07 | 15 |
nephron tubule | 5.21e-07 | 15 |
nephron | 5.21e-07 | 15 |
uriniferous tubule | 5.21e-07 | 15 |
nephrogenic mesenchyme | 5.21e-07 | 15 |
cavitated compound organ | 8.87e-07 | 31 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 5.96e-12 | 106 |
cell type cancer | 1.93e-08 | 143 |
cancer | 2.00e-08 | 235 |
adenocarcinoma | 7.04e-08 | 25 |
disease of cellular proliferation | 1.63e-07 | 239 |