FFCP PHASE1:Hg19::chr11:57200295..57200306,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:57200295..57200306,- | |||
|coexpression_cluster_id=C6 | |coexpression_cluster_id=C6 | ||
|description=CAGE_peak_at_chr11:57200295..57200306,- | |description=CAGE_peak_at_chr11:57200295..57200306,- | ||
|id=chr11:57200295..57200306,- | |id=chr11:57200295..57200306,- | ||
|ontology_enrichment_celltype=CL:0002057!2.10e-35!42;CL:0000860!1.74e-32!45;CL:0000557!1.80e-29!71;CL:0000766!9.26e-29!76;CL:0000839!5.20e-28!70;CL:0000763!1.82e-25!112;CL:0000049!1.82e-25!112;CL:0000988!4.21e-23!182;CL:0002009!5.75e-23!65;CL:0002194!4.43e-22!63;CL:0000576!4.43e-22!63;CL:0000040!4.43e-22!63;CL:0000559!4.43e-22!63;CL:0000738!6.49e-22!140;CL:0000037!1.05e-21!172;CL:0000566!1.05e-21!172;CL:0002032!1.46e-19!165;CL:0000837!1.46e-19!165;CL:0002031!2.22e-19!124;CL:0000048!6.84e-16!430;CL:0002087!8.11e-16!119;CL:0000723!2.08e-15!436;CL:0000034!8.71e-15!444;CL:0000219!9.20e-15!390;CL:0000134!5.84e-14!358;CL:0002320!2.29e-13!365;CL:0002274!1.03e-11!5;CL:0000457!1.03e-11!5;CL:0002191!1.03e-11!5;CL:0000097!1.03e-11!5;CL:0000831!1.03e-11!5;CL:0002028!1.03e-11!5;CL:0002371!3.11e-10!591;CL:0000144!1.42e-08!625;CL:0000188!4.71e-08!9;CL:0000594!1.93e-07!3;CL:0000623!3.23e-07!3;CL:0000825!3.23e-07!3;CL:0000548!9.02e-07!679;CL:0000004!9.02e-07!679;CL:0000255!9.02e-07!679 | |ontology_enrichment_celltype=CL:0002057!2.10e-35!42;CL:0000860!1.74e-32!45;CL:0000557!1.80e-29!71;CL:0000766!9.26e-29!76;CL:0000839!5.20e-28!70;CL:0000763!1.82e-25!112;CL:0000049!1.82e-25!112;CL:0000988!4.21e-23!182;CL:0002009!5.75e-23!65;CL:0002194!4.43e-22!63;CL:0000576!4.43e-22!63;CL:0000040!4.43e-22!63;CL:0000559!4.43e-22!63;CL:0000738!6.49e-22!140;CL:0000037!1.05e-21!172;CL:0000566!1.05e-21!172;CL:0002032!1.46e-19!165;CL:0000837!1.46e-19!165;CL:0002031!2.22e-19!124;CL:0000048!6.84e-16!430;CL:0002087!8.11e-16!119;CL:0000723!2.08e-15!436;CL:0000034!8.71e-15!444;CL:0000219!9.20e-15!390;CL:0000134!5.84e-14!358;CL:0002320!2.29e-13!365;CL:0002274!1.03e-11!5;CL:0000457!1.03e-11!5;CL:0002191!1.03e-11!5;CL:0000097!1.03e-11!5;CL:0000831!1.03e-11!5;CL:0002028!1.03e-11!5;CL:0002371!3.11e-10!591;CL:0000144!1.42e-08!625;CL:0000188!4.71e-08!9;CL:0000594!1.93e-07!3;CL:0000623!3.23e-07!3;CL:0000825!3.23e-07!3;CL:0000548!9.02e-07!679;CL:0000004!9.02e-07!679;CL:0000255!9.02e-07!679 | ||
|ontology_enrichment_celltype_v019=CL:0002393;5.10e-24;6!CL:0002397;5.10e-24;6!CL:0000766;1.12e-21;69!CL:0000576;1.69e-15;48!CL:0000860;1.92e-14;33!CL:0002057;1.92e-14;33!CL:0000097;3.76e-13;5!CL:0000473;1.16e-10;39!CL:0000234;1.16e-10;39!CL:0002363;7.21e-09;2!CL:0000163;1.04e-07;9!CL:0000763;6.71e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,4.50e-29,72;CL:0000860,8.67e-29,42;CL:0002057,8.67e-29,42;CL:0000839,1.24e-26,66;CL:0000557,3.15e-26,67;CL:0000473,4.14e-25,48;CL:0000234,4.14e-25,48;CL:0002194,5.97e-20,59;CL:0000576,5.97e-20,59;CL:0000040,5.97e-20,59;CL:0000559,5.97e-20,59;CL:0002009,2.77e-19,61;CL:0000763,3.73e-19,108;CL:0000049,3.73e-19,108;CL:0002393,2.93e-16,9;CL:0002397,2.93e-16,9;CL:0000738,5.00e-15,136;CL:0002031,2.53e-14,120;CL:0000097,4.13e-13,5;CL:0002028,4.13e-13,5;CL:0002032,1.54e-12,161;CL:0000837,1.54e-12,161;CL:0000037,5.68e-12,168;CL:0000988,2.61e-11,177;CL:0002087,6.15e-10,115;CL:0002363,8.09e-09,2;CL:0000008,8.09e-09,2;CL:0000163,1.09e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;2.72e-23;42!CL:0000008;7.21e-09;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!9.62e-31!80;UBERON:0002390!4.12e-28!102;UBERON:0003061!4.12e-28!102;UBERON:0001474!7.33e-28!86;UBERON:0002193!1.44e-24!112;UBERON:0004765!3.63e-22!101;UBERON:0001434!3.63e-22!101;UBERON:0002405!7.75e-21!115;UBERON:0002204!2.22e-20!167;UBERON:0002384!3.38e-13!375;UBERON:0003081!3.72e-10!216 | |ontology_enrichment_uberon=UBERON:0002371!9.62e-31!80;UBERON:0002390!4.12e-28!102;UBERON:0003061!4.12e-28!102;UBERON:0001474!7.33e-28!86;UBERON:0002193!1.44e-24!112;UBERON:0004765!3.63e-22!101;UBERON:0001434!3.63e-22!101;UBERON:0002405!7.75e-21!115;UBERON:0002204!2.22e-20!167;UBERON:0002384!3.38e-13!375;UBERON:0003081!3.72e-10!216 | ||
|ontology_enrichment_uberon_v019=UBERON:0003566;7.21e-09;2!UBERON:0001777;7.21e-09;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.65e-23,76;UBERON:0001474,2.51e-21,82;UBERON:0004765,2.27e-19,90;UBERON:0002405,1.01e-18,93;UBERON:0002390,9.98e-18,98;UBERON:0003061,9.98e-18,98;UBERON:0001434,2.34e-17,100;UBERON:0002193,5.19e-16,108;UBERON:0002204,5.12e-10,167;UBERON:0003566,8.09e-09,2;UBERON:0001777,8.09e-09,2;UBERON:0003081,4.78e-08,203 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.57345710739562,0,0.154816123316076,0,0,0,0,0,0,3.87796785972314,6.61796676651468,4.12320654360118,0,0,0,0.145398238779565,0,0.242584061187816,0.697287110717054,0.411167888021826,0.929119112685311,0.28769239232215,0.512321413058201,0.236482229888585,1.03423704220986,0.645484683583826,0,0.376484679085209,0.818718450173537,0.898893937780338,0.306083892370903,0.320929027076094,0,0,0.398927315243264,0,2.90209238628584,2.8369261234557,0.622822248995575,0.75374599577023,0,0.217188844705117,3.63239701580021,1.84138817993782,1.89877432464531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140450806702248,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03993478527958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47798971368783,2.0251139823042,0.207328115540772,0.144119953416961,0.37872730027914,0,0.763976851116555,0,0,0.205654985406647,0.300343057843917,0,0,0,0,0,0,0,0,0,0,0,0.532844358032199,0,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.591092280605782,0.215627574859517,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.862856803274467,0.640365346820666,0,0,0,0,0,0,0,0,0,0,0.616838775210622,0,0,0.519254429183621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.501689773854853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154048617114644,0.15350367472613,0.137836572484531,0.537101224341368,0.580066775656914,0.0852266274161009,0,0,0,0,0,0,0,0,0,0.532306030317022,0,0,0,0,0,0,0.255897791311334,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286822704408103,0.0982490410131212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199579371432817,0,0.423347165447766,0,0,0,0,0,0,0,0,0,0.343505344755765,0,0,0.166849141711909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16480387422676,0,0,0,0,0,0.123084805461069,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569710279235006,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0.158936578980379,0,0,0,0,0,0,0,0,0.123563938946503,0.417687798021821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274083849293502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288950589901519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449947783103001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.570930667089935,0,0,0,0.149254802886874,0,0,0.378806010550178,0,0.889811221596536,0,0,0,0,0,0,0,0,0.265841714557995,0,0,0,0,0.181848659202559,0,0,0,0,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213383459388282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340853619036631,0,0,0.31020638566432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371995018166751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.57345710739562,0,0.154816123316076,0,0,0,0,0,0,3.87796785972314,6.61796676651468,4.12320654360118,0,0,0,0.145398238779565,0,0.242584061187816,0.697287110717054,0.411167888021826,0.929119112685311,0.28769239232215,0.512321413058201,0.236482229888585,1.03423704220986,0.645484683583826,0,0.376484679085209,0.818718450173537,0.898893937780338,0.306083892370903,0.320929027076094,0,0,0.398927315243264,0,2.90209238628584,2.8369261234557,0.622822248995575,0.75374599577023,0,0.217188844705117,3.63239701580021,1.84138817993782,1.89877432464531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140450806702248,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03993478527958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47798971368783,2.0251139823042,0.207328115540772,0.144119953416961,0.37872730027914,0,0.763976851116555,0,0,0.205654985406647,0.300343057843917,0,0,0,0,0,0,0,0,0,0,0,0.532844358032199,0,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.591092280605782,0.215627574859517,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.862856803274467,0.640365346820666,0,0,0,0,0,0,0,0,0,0,0.616838775210622,0,0,0.519254429183621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.501689773854853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154048617114644,0.15350367472613,0.137836572484531,0.537101224341368,0.580066775656914,0.0852266274161009,0,0,0,0,0,0,0,0,0,0.532306030317022,0,0,0,0,0,0,0.255897791311334,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286822704408103,0.0982490410131212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199579371432817,0,0.423347165447766,0,0,0,0,0,0,0,0,0,0.343505344755765,0,0,0.166849141711909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16480387422676,0,0,0,0,0,0.123084805461069,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569710279235006,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0.158936578980379,0,0,0,0,0,0,0,0,0.123563938946503,0.417687798021821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274083849293502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288950589901519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449947783103001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.570930667089935,0,0,0,0.149254802886874,0,0,0.378806010550178,0,0.889811221596536,0,0,0,0,0,0,0,0,0.265841714557995,0,0,0,0,0.181848659202559,0,0,0,0,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213383459388282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340853619036631,0,0,0.31020638566432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371995018166751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr11:57200295..57200306,- | |short_description=p@chr11:57200295..57200306,- | ||
}} | }} |
Latest revision as of 22:58, 23 July 2015
Short description: | p@chr11:57200295..57200306, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:57200295..57200306, - |
Coexpression cluster: | C6_CD14_Eosinophils_Basophils_Peripheral_CD34_Natural_immature |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 4.50e-29 | 72 |
classical monocyte | 8.67e-29 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.67e-29 | 42 |
myeloid lineage restricted progenitor cell | 1.24e-26 | 66 |
granulocyte monocyte progenitor cell | 3.15e-26 | 67 |
defensive cell | 4.14e-25 | 48 |
phagocyte | 4.14e-25 | 48 |
monopoietic cell | 5.97e-20 | 59 |
monocyte | 5.97e-20 | 59 |
monoblast | 5.97e-20 | 59 |
promonocyte | 5.97e-20 | 59 |
macrophage dendritic cell progenitor | 2.77e-19 | 61 |
myeloid cell | 3.73e-19 | 108 |
common myeloid progenitor | 3.73e-19 | 108 |
intermediate monocyte | 2.93e-16 | 9 |
CD14-positive, CD16-positive monocyte | 2.93e-16 | 9 |
leukocyte | 5.00e-15 | 136 |
hematopoietic lineage restricted progenitor cell | 2.53e-14 | 120 |
mast cell | 4.13e-13 | 5 |
basophil mast progenitor cell | 4.13e-13 | 5 |
hematopoietic oligopotent progenitor cell | 1.54e-12 | 161 |
hematopoietic multipotent progenitor cell | 1.54e-12 | 161 |
hematopoietic stem cell | 5.68e-12 | 168 |
hematopoietic cell | 2.61e-11 | 177 |
nongranular leukocyte | 6.15e-10 | 115 |
keratocyte | 8.09e-09 | 2 |
migratory cranial neural crest cell | 8.09e-09 | 2 |
endocrine cell | 1.09e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.65e-23 | 76 |
bone element | 2.51e-21 | 82 |
skeletal element | 2.27e-19 | 90 |
immune system | 1.01e-18 | 93 |
hematopoietic system | 9.98e-18 | 98 |
blood island | 9.98e-18 | 98 |
skeletal system | 2.34e-17 | 100 |
hemolymphoid system | 5.19e-16 | 108 |
musculoskeletal system | 5.12e-10 | 167 |
head connective tissue | 8.09e-09 | 2 |
substantia propria of cornea | 8.09e-09 | 2 |
lateral plate mesoderm | 4.78e-08 | 203 |