FFCP PHASE1:Hg19::chr17:80416609..80416624,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr17:80416609..80416624,+
|short_description=p1@NARF
|description=CAGE_peak_1_at_NARF_5end
|association_with_transcript=22bp_to_ENST00000412079_5end
|EntrezGe...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=26502 | |EntrezGene=26502 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29916 | |HGNC=29916 | ||
|TSSclassifier=strong | |||
|UniProt=B4DZZ6 | |UniProt=B4DZZ6 | ||
|association_with_transcript=22bp_to_ENST00000412079_5end | |||
|cluster_id=chr17:80416609..80416624,+ | |||
|coexpression_cluster_id=C33 | |||
|description=CAGE_peak_1_at_NARF_5end | |||
|id=chr17:80416609..80416624,+ | |||
|ontology_enrichment_celltype=CL:0000763!1.36e-14!112;CL:0000049!1.36e-14!112;CL:0002139!3.03e-10!24;CL:0000115!4.27e-09!35;CL:0000988!5.99e-09!182;CL:0000037!1.64e-08!172;CL:0000566!1.64e-08!172;CL:0002032!1.75e-08!165;CL:0000837!1.75e-08!165;CL:0000071!1.90e-07!18;CL:0002546!1.90e-07!18;CL:0000860!8.74e-07!45 | |||
|ontology_enrichment_celltype_v019=CL:0002139;3.33e-10;24!CL:0000860;3.69e-09;33!CL:0002057;3.69e-09;33!CL:0000115;3.58e-08;36!CL:0000071;2.11e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,1.08e-14,108;CL:0000049,1.08e-14,108;CL:0002139,3.03e-10,24;CL:0000115,1.59e-09,36;CL:0000988,1.30e-08,177;CL:0000037,1.89e-08,168;CL:0002032,2.00e-08,161;CL:0000837,2.00e-08,161;CL:0000071,1.90e-07,18;CL:0002546,1.90e-07,18 | |||
|ontology_enrichment_development_v019=CL:0002546;2.11e-07;18 | |||
|ontology_enrichment_disease=DOID:1240!6.90e-11!39;DOID:2531!7.39e-10!51;DOID:0060083!7.39e-10!51;DOID:8692!1.04e-09!31 | |||
|ontology_enrichment_disease_v019=DOID:8692;1.49e-09;31!DOID:1240;1.20e-08;39!DOID:2531;1.74e-07;51!DOID:0060083;1.74e-07;51 | |||
|ontology_enrichment_disease_v019_2=DOID:1240,6.90e-11,39;DOID:2531,7.39e-10,51;DOID:0060083,7.39e-10,51;DOID:8692,1.04e-09,31 | |||
|ontology_enrichment_uberon=UBERON:0002193!7.72e-09!112;UBERON:0000487!6.44e-08!22;UBERON:0001986!1.90e-07!18;UBERON:0004638!1.90e-07!18;UBERON:0004852!1.90e-07!18;UBERON:0002390!1.93e-07!102;UBERON:0003061!1.93e-07!102;UBERON:0000178!2.44e-07!15;UBERON:0000179!2.44e-07!15;UBERON:0000463!2.44e-07!15;UBERON:0000055!2.99e-07!69;UBERON:0002405!7.54e-07!115;UBERON:0006914!9.03e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0000487;7.61e-08;22!UBERON:0000490;1.19e-07;33!UBERON:0004638;2.11e-07;18!UBERON:0001986;2.11e-07;18!UBERON:0004852;2.11e-07;18!UBERON:0000178;2.34e-07;15!UBERON:0000179;2.34e-07;15!UBERON:0000463;2.34e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,7.73e-09,108;UBERON:0000487,6.44e-08,22;UBERON:0000055,9.49e-08,68;UBERON:0004638,1.90e-07,18;UBERON:0001986,1.90e-07,18;UBERON:0004852,1.90e-07,18;UBERON:0002390,1.97e-07,98;UBERON:0003061,1.97e-07,98;UBERON:0000178,2.44e-07,15;UBERON:0000179,2.44e-07,15;UBERON:0000463,2.44e-07,15;UBERON:0003081,4.76e-07,203;UBERON:0006914,9.03e-07,25 | |||
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| ||
|short_description=p1@NARF | |||
}} | }} |
Latest revision as of 12:56, 18 September 2015
Short description: | p1@NARF |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_NARF_5end |
Coexpression cluster: | C33_Reticulocytes_liver_Whole_blood_chronic_acute_spleen |
Association with transcript: | 22bp_to_ENST00000412079_5end |
EntrezGene: | NARF |
HGNC: | 29916 |
UniProt: | B4DZZ6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 1.08e-14 | 108 |
common myeloid progenitor | 1.08e-14 | 108 |
endothelial cell of vascular tree | 3.03e-10 | 24 |
endothelial cell | 1.59e-09 | 36 |
hematopoietic cell | 1.30e-08 | 177 |
hematopoietic stem cell | 1.89e-08 | 168 |
hematopoietic oligopotent progenitor cell | 2.00e-08 | 161 |
hematopoietic multipotent progenitor cell | 2.00e-08 | 161 |
blood vessel endothelial cell | 1.90e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.90e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 7.73e-09 | 108 |
simple squamous epithelium | 6.44e-08 | 22 |
vessel | 9.49e-08 | 68 |
blood vessel endothelium | 1.90e-07 | 18 |
endothelium | 1.90e-07 | 18 |
cardiovascular system endothelium | 1.90e-07 | 18 |
hematopoietic system | 1.97e-07 | 98 |
blood island | 1.97e-07 | 98 |
blood | 2.44e-07 | 15 |
haemolymphatic fluid | 2.44e-07 | 15 |
organism substance | 2.44e-07 | 15 |
lateral plate mesoderm | 4.76e-07 | 203 |
squamous epithelium | 9.03e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
leukemia | 6.90e-11 | 39 |
hematologic cancer | 7.39e-10 | 51 |
immune system cancer | 7.39e-10 | 51 |
myeloid leukemia | 1.04e-09 | 31 |