FFCP PHASE1:Hg19::chr13:27786809..27786840,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:27786809..27786840,+ | |||
|coexpression_cluster_id=C14 | |coexpression_cluster_id=C14 | ||
|description=CAGE_peak_at_chr13:27786809..27786840,+ | |description=CAGE_peak_at_chr13:27786809..27786840,+ | ||
|id=chr13:27786809..27786840,+ | |id=chr13:27786809..27786840,+ | ||
|ontology_enrichment_celltype=CL:0000037!7.07e-14!172;CL:0000566!7.07e-14!172;CL:0002032!1.62e-12!165;CL:0000837!1.62e-12!165;CL:0000988!2.22e-12!182;CL:0000763!1.13e-09!112;CL:0000049!1.13e-09!112;CL:0000738!4.38e-07!140 | |ontology_enrichment_celltype=CL:0000037!7.07e-14!172;CL:0000566!7.07e-14!172;CL:0002032!1.62e-12!165;CL:0000837!1.62e-12!165;CL:0000988!2.22e-12!182;CL:0000763!1.13e-09!112;CL:0000049!1.13e-09!112;CL:0000738!4.38e-07!140 | ||
|ontology_enrichment_celltype_v019=CL:0000775;3.75e-10;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000775,3.75e-10,3 | |||
|ontology_enrichment_development_v019=UBERON:0005425;5.06e-08;1 | |||
|ontology_enrichment_disease=DOID:8692!7.94e-09!31;DOID:1240!2.18e-07!39 | |ontology_enrichment_disease=DOID:8692!7.94e-09!31;DOID:1240!2.18e-07!39 | ||
|ontology_enrichment_disease_v019=DOID:0060085;5.06e-08;1!DOID:3165;5.06e-08;1!DOID:0060121;5.06e-08;1!DOID:2438;5.06e-08;1!DOID:4418;5.06e-08;1!DOID:8692;2.86e-07;31 | |||
|ontology_enrichment_disease_v019_2=DOID:0060085,3.83e-08,1;DOID:3165,3.83e-08,1;DOID:0060121,3.83e-08,1;DOID:2438,3.83e-08,1;DOID:4418,3.83e-08,1;DOID:2531,1.69e-07,51;DOID:0060083,1.69e-07,51;DOID:8692,1.95e-07,31 | |||
|ontology_enrichment_uberon=UBERON:0000178!3.13e-18!15;UBERON:0000179!3.13e-18!15;UBERON:0000463!3.13e-18!15;UBERON:0002390!8.77e-07!102;UBERON:0003061!8.77e-07!102 | |ontology_enrichment_uberon=UBERON:0000178!3.13e-18!15;UBERON:0000179!3.13e-18!15;UBERON:0000463!3.13e-18!15;UBERON:0002390!8.77e-07!102;UBERON:0003061!8.77e-07!102 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;6.07e-46;15!UBERON:0000179;6.07e-46;15!UBERON:0000463;6.07e-46;15!UBERON:0002390;2.00e-23;32!UBERON:0002193;3.92e-13;42!UBERON:0000941;5.06e-08;1!UBERON:0001785;5.06e-08;1!UBERON:0002464;5.06e-08;1!UBERON:0004904;5.06e-08;1!UBERON:0001021;5.06e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,7.69e-46,15;UBERON:0000179,7.69e-46,15;UBERON:0000463,7.69e-46,15;UBERON:0000941,4.11e-08,1;UBERON:0001785,4.11e-08,1;UBERON:0002464,4.11e-08,1;UBERON:0004904,4.11e-08,1;UBERON:0001021,4.11e-08,1;UBERON:0003902,4.11e-08,1;UBERON:0005425,4.11e-08,1;UBERON:0002390,4.41e-08,98;UBERON:0003061,4.41e-08,98;UBERON:0002193,3.84e-07,108 | |||
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| ||
|short_description=p@chr13:27786809..27786840,+ | |short_description=p@chr13:27786809..27786840,+ | ||
}} | }} |
Latest revision as of 15:18, 24 July 2015
Short description: | p@chr13:27786809..27786840, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:27786809..27786840, + |
Coexpression cluster: | C14_Whole_blood_Reticulocytes_liver_Neutrophils_Eosinophils_spleen |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neutrophil | 3.75e-10 | 3 |
Ontology term | p-value | n |
---|---|---|
blood | 7.69e-46 | 15 |
haemolymphatic fluid | 7.69e-46 | 15 |
organism substance | 7.69e-46 | 15 |
cranial nerve II | 4.11e-08 | 1 |
cranial nerve | 4.11e-08 | 1 |
nerve trunk | 4.11e-08 | 1 |
nerve connecting eye with brain | 4.11e-08 | 1 |
nerve | 4.11e-08 | 1 |
retinal neural layer | 4.11e-08 | 1 |
presumptive neural retina | 4.11e-08 | 1 |
hematopoietic system | 4.41e-08 | 98 |
blood island | 4.41e-08 | 98 |
hemolymphoid system | 3.84e-07 | 108 |
Ontology term | p-value | n |
---|---|---|
organ system benign neoplasm | 3.83e-08 | 1 |
skin benign neoplasm | 3.83e-08 | 1 |
integumentary system benign neoplasm | 3.83e-08 | 1 |
dermis tumor | 3.83e-08 | 1 |
cutaneous fibrous histiocytoma | 3.83e-08 | 1 |
hematologic cancer | 1.69e-07 | 51 |
immune system cancer | 1.69e-07 | 51 |
myeloid leukemia | 1.95e-07 | 31 |