FFCP PHASE1:Hg19::chr16:11680791..11680813,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9516 | |EntrezGene=9516 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16841 | |HGNC=16841 | ||
|TSSclassifier=strong | |||
|UniProt=G5E9K0,Q99732 | |UniProt=G5E9K0,Q99732 | ||
|association_with_transcript=0bp_to_ENST00000413364,NM_001136472,NM_001136473,uc002dba.2,uc002dbb.2,uc002dbe.3_5end | |association_with_transcript=0bp_to_ENST00000413364,NM_001136472,NM_001136473,uc002dba.2,uc002dbb.2,uc002dbe.3_5end | ||
|cluster_id=chr16:11680791..11680813,- | |||
|coexpression_cluster_id=C2 | |coexpression_cluster_id=C2 | ||
|description=CAGE_peak_2_at_LITAF_5end | |description=CAGE_peak_2_at_LITAF_5end | ||
|id=chr16:11680791..11680813,- | |id=chr16:11680791..11680813,- | ||
|ontology_enrichment_celltype=CL:0000738!6.88e-29!140;CL:0002087!3.53e-24!119;CL:0000766!1.16e-23!76;CL:0002031!1.95e-23!124;CL:0000557!6.62e-19!71;CL:0002009!7.86e-19!65;CL:0002194!3.62e-18!63;CL:0000576!3.62e-18!63;CL:0000040!3.62e-18!63;CL:0000559!3.62e-18!63;CL:0002057!7.35e-18!42;CL:0000839!3.43e-17!70;CL:0000860!3.31e-16!45;CL:0000037!5.52e-15!172;CL:0000566!5.52e-15!172;CL:0002032!7.01e-14!165;CL:0000837!7.01e-14!165;CL:0000988!6.58e-13!182;CL:0000791!1.06e-08!18;CL:0000789!1.06e-08!18;CL:0002420!1.06e-08!18;CL:0002419!1.06e-08!18;CL:0000790!1.06e-08!18;CL:0000763!2.66e-08!112;CL:0000049!2.66e-08!112 | |ontology_enrichment_celltype=CL:0000738!6.88e-29!140;CL:0002087!3.53e-24!119;CL:0000766!1.16e-23!76;CL:0002031!1.95e-23!124;CL:0000557!6.62e-19!71;CL:0002009!7.86e-19!65;CL:0002194!3.62e-18!63;CL:0000576!3.62e-18!63;CL:0000040!3.62e-18!63;CL:0000559!3.62e-18!63;CL:0002057!7.35e-18!42;CL:0000839!3.43e-17!70;CL:0000860!3.31e-16!45;CL:0000037!5.52e-15!172;CL:0000566!5.52e-15!172;CL:0002032!7.01e-14!165;CL:0000837!7.01e-14!165;CL:0000988!6.58e-13!182;CL:0000791!1.06e-08!18;CL:0000789!1.06e-08!18;CL:0002420!1.06e-08!18;CL:0002419!1.06e-08!18;CL:0000790!1.06e-08!18;CL:0000763!2.66e-08!112;CL:0000049!2.66e-08!112 | ||
|ontology_enrichment_celltype_v019=CL:0000860;4.16e-16;33!CL:0002057;4.16e-16;33!CL:0000473;5.10e-16;39!CL:0000234;5.10e-16;39!CL:0000576;3.75e-11;48!CL:0000766;7.70e-11;69!CL:0000791;1.17e-08;18!CL:0000789;1.17e-08;18!CL:0002419;1.17e-08;18!CL:0002087;4.36e-08;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,7.42e-30,136;CL:0002087,3.91e-25,115;CL:0000766,4.22e-25,72;CL:0002031,2.49e-24,120;CL:0000473,9.84e-21,48;CL:0000234,9.84e-21,48;CL:0002009,3.48e-20,61;CL:0000557,3.76e-20,67;CL:0002194,1.62e-19,59;CL:0000576,1.62e-19,59;CL:0000040,1.62e-19,59;CL:0000559,1.62e-19,59;CL:0000839,2.40e-18,66;CL:0000860,7.35e-18,42;CL:0002057,7.35e-18,42;CL:0000037,1.92e-15,168;CL:0002032,2.56e-14,161;CL:0000837,2.56e-14,161;CL:0000988,8.64e-14,177;CL:0000791,1.05e-08,18;CL:0000789,1.05e-08,18;CL:0002420,1.05e-08,18;CL:0002419,1.05e-08,18;CL:0000790,1.05e-08,18;CL:0000763,1.10e-08,108;CL:0000049,1.10e-08,108 | |||
|ontology_enrichment_development_v019=CL:0002057;1.77e-13;42!CL:0000790;1.17e-08;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.64e-19!102;UBERON:0003061!2.64e-19!102;UBERON:0002193!1.82e-16!112;UBERON:0002371!3.52e-15!80;UBERON:0001474!1.13e-14!86;UBERON:0004765!1.53e-11!101;UBERON:0001434!1.53e-11!101;UBERON:0002405!4.48e-10!115 | |ontology_enrichment_uberon=UBERON:0002390!2.64e-19!102;UBERON:0003061!2.64e-19!102;UBERON:0002193!1.82e-16!112;UBERON:0002371!3.52e-15!80;UBERON:0001474!1.13e-14!86;UBERON:0004765!1.53e-11!101;UBERON:0001434!1.53e-11!101;UBERON:0002405!4.48e-10!115 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.38e-20,98;UBERON:0003061,3.38e-20,98;UBERON:0002193,3.61e-17,108;UBERON:0002371,4.40e-16,76;UBERON:0001474,1.73e-15,82;UBERON:0004765,1.32e-13,90;UBERON:0002405,5.09e-13,93;UBERON:0001434,2.31e-12,100 | |||
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| ||
|short_description=p2@LITAF | |short_description=p2@LITAF | ||
}} | }} |
Latest revision as of 06:37, 20 September 2015
Short description: | p2@LITAF |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_LITAF_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 0bp_to_ENST00000413364, NM_001136472, NM_001136473, uc002dba.2, uc002dbb.2, uc002dbe.3_5end |
EntrezGene: | LITAF |
HGNC: | 16841 |
UniProt: | G5E9K0Q99732 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 7.42e-30 | 136 |
nongranular leukocyte | 3.91e-25 | 115 |
myeloid leukocyte | 4.22e-25 | 72 |
hematopoietic lineage restricted progenitor cell | 2.49e-24 | 120 |
defensive cell | 9.84e-21 | 48 |
phagocyte | 9.84e-21 | 48 |
macrophage dendritic cell progenitor | 3.48e-20 | 61 |
granulocyte monocyte progenitor cell | 3.76e-20 | 67 |
monopoietic cell | 1.62e-19 | 59 |
monocyte | 1.62e-19 | 59 |
monoblast | 1.62e-19 | 59 |
promonocyte | 1.62e-19 | 59 |
myeloid lineage restricted progenitor cell | 2.40e-18 | 66 |
classical monocyte | 7.35e-18 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.35e-18 | 42 |
hematopoietic stem cell | 1.92e-15 | 168 |
hematopoietic oligopotent progenitor cell | 2.56e-14 | 161 |
hematopoietic multipotent progenitor cell | 2.56e-14 | 161 |
hematopoietic cell | 8.64e-14 | 177 |
mature alpha-beta T cell | 1.05e-08 | 18 |
alpha-beta T cell | 1.05e-08 | 18 |
immature T cell | 1.05e-08 | 18 |
mature T cell | 1.05e-08 | 18 |
immature alpha-beta T cell | 1.05e-08 | 18 |
myeloid cell | 1.10e-08 | 108 |
common myeloid progenitor | 1.10e-08 | 108 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.38e-20 | 98 |
blood island | 3.38e-20 | 98 |
hemolymphoid system | 3.61e-17 | 108 |
bone marrow | 4.40e-16 | 76 |
bone element | 1.73e-15 | 82 |
skeletal element | 1.32e-13 | 90 |
immune system | 5.09e-13 | 93 |
skeletal system | 2.31e-12 | 100 |