FFCP PHASE1:Hg19::chr17:57807062..57807077,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:57807062..57807077,+ | |||
|coexpression_cluster_id=C2 | |coexpression_cluster_id=C2 | ||
|description=CAGE_peak_at_chr17:57807062..57807077,+ | |description=CAGE_peak_at_chr17:57807062..57807077,+ | ||
|id=chr17:57807062..57807077,+ | |id=chr17:57807062..57807077,+ | ||
|ontology_enrichment_celltype=CL:0002057!2.32e-58!42;CL:0000860!8.34e-54!45;CL:0000766!4.74e-49!76;CL:0002194!2.75e-37!63;CL:0000576!2.75e-37!63;CL:0000040!2.75e-37!63;CL:0000559!2.75e-37!63;CL:0002009!7.45e-36!65;CL:0000839!1.25e-32!70;CL:0000557!4.88e-32!71;CL:0000763!3.44e-31!112;CL:0000049!3.44e-31!112;CL:0000738!8.99e-27!140;CL:0000094!1.08e-21!8;CL:0000037!1.34e-20!172;CL:0000566!1.34e-20!172;CL:0002087!2.45e-20!119;CL:0002032!1.09e-19!165;CL:0000837!1.09e-19!165;CL:0000988!8.72e-19!182;CL:0002393!4.34e-18!9;CL:0002397!4.34e-18!9;CL:0002031!1.02e-16!124;CL:0000081!2.62e-15!11;CL:0000775!1.75e-09!3;CL:0000875!2.77e-09!3;CL:0002396!2.77e-09!3;CL:0000767!8.16e-09!3;CL:0000771!8.68e-07!2 | |ontology_enrichment_celltype=CL:0002057!2.32e-58!42;CL:0000860!8.34e-54!45;CL:0000766!4.74e-49!76;CL:0002194!2.75e-37!63;CL:0000576!2.75e-37!63;CL:0000040!2.75e-37!63;CL:0000559!2.75e-37!63;CL:0002009!7.45e-36!65;CL:0000839!1.25e-32!70;CL:0000557!4.88e-32!71;CL:0000763!3.44e-31!112;CL:0000049!3.44e-31!112;CL:0000738!8.99e-27!140;CL:0000094!1.08e-21!8;CL:0000037!1.34e-20!172;CL:0000566!1.34e-20!172;CL:0002087!2.45e-20!119;CL:0002032!1.09e-19!165;CL:0000837!1.09e-19!165;CL:0000988!8.72e-19!182;CL:0002393!4.34e-18!9;CL:0002397!4.34e-18!9;CL:0002031!1.02e-16!124;CL:0000081!2.62e-15!11;CL:0000775!1.75e-09!3;CL:0000875!2.77e-09!3;CL:0002396!2.77e-09!3;CL:0000767!8.16e-09!3;CL:0000771!8.68e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0000094;1.32e-41;8!CL:0000081;4.70e-30;11!CL:0000775;7.67e-22;3!CL:0000875;3.37e-21;3!CL:0002396;3.37e-21;3!CL:0000766;6.87e-16;69!CL:0000771;6.23e-15;2!CL:0000576;1.55e-14;48!CL:0000860;5.68e-10;33!CL:0002057;5.68e-10;33!CL:0000767;6.00e-10;3!CL:0000763;3.45e-07;100!CL:0000473;3.67e-07;39!CL:0000234;3.67e-07;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000094,1.33e-41,8;CL:0000766,1.23e-32,72;CL:0000081,4.70e-30,11;CL:0000860,7.15e-24,42;CL:0002057,7.15e-24,42;CL:0000775,7.95e-22,3;CL:0000875,2.57e-21,3;CL:0002396,2.57e-21,3;CL:0000473,1.39e-20,48;CL:0000234,1.39e-20,48;CL:0000763,1.45e-20,108;CL:0000049,1.45e-20,108;CL:0002393,1.56e-18,9;CL:0002397,1.56e-18,9;CL:0002194,5.60e-16,59;CL:0000576,5.60e-16,59;CL:0000040,5.60e-16,59;CL:0000559,5.60e-16,59;CL:0000738,1.49e-15,136;CL:0002009,2.20e-15,61;CL:0000771,6.02e-15,2;CL:0000839,4.70e-14,66;CL:0000557,8.22e-14,67;CL:0002032,1.52e-12,161;CL:0000837,1.52e-12,161;CL:0000037,7.33e-12,168;CL:0000988,4.62e-11,177;CL:0000767,6.00e-10,3;CL:0002087,4.18e-07,115 | |||
|ontology_enrichment_development_v019=CL:0002057;1.01e-18;42!CL:0000049;6.22e-09;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.11e-43!102;UBERON:0003061!2.11e-43!102;UBERON:0002193!1.74e-40!112;UBERON:0002371!2.19e-27!80;UBERON:0001474!7.95e-25!86;UBERON:0002405!2.15e-21!115;UBERON:0004765!9.07e-20!101;UBERON:0001434!9.07e-20!101;UBERON:0000178!1.14e-19!15;UBERON:0000179!1.14e-19!15;UBERON:0000463!1.14e-19!15;UBERON:0003081!1.83e-17!216;UBERON:0007023!7.34e-11!115;UBERON:0002204!6.27e-10!167 | |ontology_enrichment_uberon=UBERON:0002390!2.11e-43!102;UBERON:0003061!2.11e-43!102;UBERON:0002193!1.74e-40!112;UBERON:0002371!2.19e-27!80;UBERON:0001474!7.95e-25!86;UBERON:0002405!2.15e-21!115;UBERON:0004765!9.07e-20!101;UBERON:0001434!9.07e-20!101;UBERON:0000178!1.14e-19!15;UBERON:0000179!1.14e-19!15;UBERON:0000463!1.14e-19!15;UBERON:0003081!1.83e-17!216;UBERON:0007023!7.34e-11!115;UBERON:0002204!6.27e-10!167 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;5.78e-35;15!UBERON:0000179;5.78e-35;15!UBERON:0000463;5.78e-35;15!UBERON:0002390;2.30e-14;32!UBERON:0002193;3.57e-10;42!UBERON:0000029;5.40e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,6.93e-35,15;UBERON:0000179,6.93e-35,15;UBERON:0000463,6.93e-35,15;UBERON:0002390,3.93e-28,98;UBERON:0003061,3.93e-28,98;UBERON:0002193,8.50e-28,108;UBERON:0002371,6.51e-12,76;UBERON:0003081,1.84e-11,203;UBERON:0002405,5.58e-11,93;UBERON:0001474,7.08e-11,82;UBERON:0004765,1.04e-09,90;UBERON:0001434,1.64e-08,100;UBERON:0000029,4.11e-08,1 | |||
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| ||
|short_description=p@chr17:57807062..57807077,+ | |short_description=p@chr17:57807062..57807077,+ | ||
}} | }} |
Latest revision as of 19:27, 25 July 2015
Short description: | p@chr17:57807062..57807077, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:57807062..57807077, + |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte | 1.33e-41 | 8 |
myeloid leukocyte | 1.23e-32 | 72 |
blood cell | 4.70e-30 | 11 |
classical monocyte | 7.15e-24 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.15e-24 | 42 |
neutrophil | 7.95e-22 | 3 |
non-classical monocyte | 2.57e-21 | 3 |
CD14-low, CD16-positive monocyte | 2.57e-21 | 3 |
defensive cell | 1.39e-20 | 48 |
phagocyte | 1.39e-20 | 48 |
myeloid cell | 1.45e-20 | 108 |
common myeloid progenitor | 1.45e-20 | 108 |
intermediate monocyte | 1.56e-18 | 9 |
CD14-positive, CD16-positive monocyte | 1.56e-18 | 9 |
monopoietic cell | 5.60e-16 | 59 |
monocyte | 5.60e-16 | 59 |
monoblast | 5.60e-16 | 59 |
promonocyte | 5.60e-16 | 59 |
leukocyte | 1.49e-15 | 136 |
macrophage dendritic cell progenitor | 2.20e-15 | 61 |
eosinophil | 6.02e-15 | 2 |
myeloid lineage restricted progenitor cell | 4.70e-14 | 66 |
granulocyte monocyte progenitor cell | 8.22e-14 | 67 |
hematopoietic oligopotent progenitor cell | 1.52e-12 | 161 |
hematopoietic multipotent progenitor cell | 1.52e-12 | 161 |
hematopoietic stem cell | 7.33e-12 | 168 |
hematopoietic cell | 4.62e-11 | 177 |
basophil | 6.00e-10 | 3 |
nongranular leukocyte | 4.18e-07 | 115 |
Ontology term | p-value | n |
---|---|---|
blood | 6.93e-35 | 15 |
haemolymphatic fluid | 6.93e-35 | 15 |
organism substance | 6.93e-35 | 15 |
hematopoietic system | 3.93e-28 | 98 |
blood island | 3.93e-28 | 98 |
hemolymphoid system | 8.50e-28 | 108 |
bone marrow | 6.51e-12 | 76 |
lateral plate mesoderm | 1.84e-11 | 203 |
immune system | 5.58e-11 | 93 |
bone element | 7.08e-11 | 82 |
skeletal element | 1.04e-09 | 90 |
skeletal system | 1.64e-08 | 100 |
lymph node | 4.11e-08 | 1 |