FFCP PHASE1:Hg19::chr19:45350840..45350859,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:45350840..45350859,- | |||
|coexpression_cluster_id=C597 | |coexpression_cluster_id=C597 | ||
|description=CAGE_peak_at_chr19:45350840..45350859,- | |description=CAGE_peak_at_chr19:45350840..45350859,- | ||
|id=chr19:45350840..45350859,- | |id=chr19:45350840..45350859,- | ||
|ontology_enrichment_celltype=CL:0002057!9.60e-12!42;CL:0000860!6.42e-10!45;CL:0000066!1.63e-09!254 | |ontology_enrichment_celltype=CL:0002057!9.60e-12!42;CL:0000860!6.42e-10!45;CL:0000066!1.63e-09!254 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.33e-22;33!CL:0002057;2.33e-22;33!CL:0000473;7.22e-17;39!CL:0000234;7.22e-17;39!CL:0000576;1.94e-12;48!CL:0000766;1.06e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,7.43e-23,42;CL:0002057,7.43e-23,42;CL:0000473,1.75e-20,48;CL:0000234,1.75e-20,48;CL:0000557,4.36e-17,67;CL:0002009,6.25e-17,61;CL:0002194,1.03e-14,59;CL:0000576,1.03e-14,59;CL:0000040,1.03e-14,59;CL:0000559,1.03e-14,59;CL:0000839,1.41e-14,66;CL:0000766,6.81e-14,72;CL:0000763,1.07e-09,108;CL:0000049,1.07e-09,108 | |||
|ontology_enrichment_development_v019=CL:0002057;2.91e-16;42 | |||
|ontology_enrichment_disease=DOID:305!3.80e-09!106;DOID:0050687!1.06e-07!143;DOID:299!7.15e-07!25 | |ontology_enrichment_disease=DOID:305!3.80e-09!106;DOID:0050687!1.06e-07!143;DOID:299!7.15e-07!25 | ||
|ontology_enrichment_disease_v019=DOID:299;9.97e-09;25!DOID:5093;7.35e-08;4!DOID:1612;7.35e-08;4 | |||
|ontology_enrichment_disease_v019_2=DOID:299,6.77e-09,25;DOID:5093,6.24e-08,4;DOID:1612,6.24e-08,4 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.32e-14,76;UBERON:0001474,2.24e-13,82;UBERON:0004765,2.14e-11,90;UBERON:0002405,7.01e-10,93;UBERON:0001434,2.11e-09,100;UBERON:0002390,5.81e-09,98;UBERON:0003061,5.81e-09,98;UBERON:0002193,2.07e-07,108 | |||
|phase1_expression=0.363356758541113,0,0.140954404095971,0,0,0,0,0,0,0.245733936501509,2.09340350391728,0,0,0,0.331397375727916,0,0,0.730310090387373,0,0.123121058076788,0.408001382488506,0,0,0,0,0,0.0821005894499457,0,0.393364276848904,0,0.154816123316076,0,0,0.739508020333575,0,0,0,1.10799081706375,1.80490002723128,2.82114131930607,0,0,0,0.145398238779565,0.377875943688809,1.21292030593908,0,0.411167888021826,1.54853185447552,4.02769349251011,2.56160706529101,4.02019790810595,9.65287906062532,6.45484683583826,5.41705946377367,0.564727018627814,0.545812300115692,0.674170453335254,29.9962214523485,13.1580901101198,37.7208904221434,3.29851300186716,2.59302754908121,7.6720455095885,2.03146467040009,1.70215567407342,8.09668923694247,1.00499466102697,2.60741459210101,3.47502151528187,4.23779651843358,2.20966581592539,8.22802207346299,0,0,0.209658645508376,0.336985893439485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0,4.87613732627923,0,0,0,0,0,0,0.486634870302636,0.472674085820339,0.665188192387692,0.351339142772504,0.196468613246569,0,0.741568885568859,0,0,0.398873881556595,0,0,0,0.79504962946682,0,0,0,1.25849830862972,0.825354125820202,1.46296476575767,0,0,0.66944122552934,0,0,0.488124115096339,0.367663080345869,0.81014194788176,0.17859945656816,0.22452937262617,0.563057402416611,1.53316637465883,0.949265659568129,0.183201743930407,0,3.87780264148325,0.436094052142534,1.98788780678127,0.25326102332916,0.794455084879313,0.860509862246441,0,0,0,0,0,0,0.326923806226917,0.302714855289863,0,0,0,0,0,0.117434498643765,0.161872944368132,0,0,0.122834317311768,0,0,0.247266929278557,0,0,0,0.125118519871964,0,0,0,0.150238058906597,0,0.179389635688862,0.213557388818567,0.423863802319124,0,0,0.772921620136887,0.37223371266318,0.337552664482532,0.292311015483596,0.504867548488229,0.0920498986422993,0,0.355009592516614,0.10075209822764,0.339121184620975,0,0,0,0,0,0.348581828608555,0.621966330092223,0.252320850875628,0.36497735907583,0,0,1.38134921352481,0.464367928031979,0.721879481669586,0,0,0,0,0,0,0,0.196221465125346,0,1.4763109092493,1.40241773803446,0.8231480226628,1.47008711385542,0,0,0,0,0.860919069801795,0.343135620597051,0.219500570817251,0,0,0,0.325808305310325,0,0,0.115930404975077,0,0,0,0,5.53143078571493,3.43394464837949,0,0,0,0,0.16798212819886,0.283550194484773,0.0895585227028483,0.290633938513962,0,0,0.088048434013226,1.24396869324463,1.72943944100354,0.88369703398466,0,0,0,0,0.102827492703324,0.300343057843917,0,0.112131084345361,0,0.07333828582095,0.387815147273333,0,0,0.26593811658487,1.04007436911366,0,0,0,1.28680194292333,0,0.823240336780769,0,1.06617584622764,0,1.20575750823834,0,1.99945982364114,1.2162378064119,0,0,0.479249710983165,1.14861935834114,0,0.144781306667579,0.205476322550383,0.179060963239896,0,0,0,0,0.254094624222463,1.30139853857622,0,0.167516265334349,0,0.749007023947182,0,0,0,0,0,0.623912584592421,0.356857977594324,0.315404830067869,0.234282829985426,0,0,0,0,0.184369168541703,0,0.195801157462741,0,0,0.215714200818617,0.320182673410333,0.303127571446259,0,1.20956117331872,0.496215615637554,0.61384789315225,0,0,0,0.160853921143607,0,0.154209693802656,0.177561725313127,0.164254312027618,0,0.464841513839837,0.846016147141356,0.200506470303285,0.184161977871793,0,0.182091168006717,1.18011973463482,0,0.231046011313244,0,1.46139224653261,0.105551628892876,3.4120015221269,0.170093705276516,0.647747748306418,0,0.270946437543853,1.50506932156456,0,0,0.447749509444357,0,0,0.256450125116389,1.64007322849853,0.325378394664303,0.412164046590889,0,0.165018999841176,0,1.95018073810956,1.6068392984416,0.386682873168488,0,0,0,0,0.145016693914229,0,0,0,0.384380134730212,0.382838137483752,0.2023155617111,0,0.31481234683064,0,0,0,0.869932992075073,0.37064843820784,0.286249773483982,0.372158369359667,0,0.190630193923825,0.255897791311334,0,0,0.78494864019923,0.179872457583315,0.274537029736055,0.235624804691373,0,1.58510321173008,0,0,0.974853958525138,0,0.409499734223957,0.282810863907425,0,0,0,0,0,0,0.405820753925408,0.92947049429925,0.281695602532241,0.286822704408103,0.0982490410131212,0.35667105148125,0.354761064070598,0.211107635297664,0,0.379473173765715,0,0.0962221127255121,0,1.08890984861323,0.470719003883896,0,0,0,0.229723400206959,0,0,0,0,0.411362273086194,0,0,0,0,0,0.980160863924127,0,0,0,0,0,0.191505370132367,0.635020748171649,0,0,0,0,0,0,0,0,0,0,0.307240764308458,0,0.166849141711909,0,0,0,0.270455678475983,0,2.81974010175699,1.49712432326576,0,0.121360521749513,0,0,0.23874448473769,0.296964680832639,0,0,0.562677665642051,0.890469640183247,0,0.211125408127993,3.58646378851925,0.828851746593443,0,0.409074730008619,0,0,0.808815160325942,1.07412704805365,0,0,0,0,0,0,0,1.5625665665114,4.1106199998212,0,0.227586896570999,4.57656570526979,0.472775363535873,0,0.291604613383254,0.173624994933292,0,0.120596438625408,0,0,0,0,0.10893846351899,0,0.230850775511391,0,0,0.179515288819544,0.217294743844016,0.319001159731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| ||
|short_description=p@chr19:45350840..45350859,- | |short_description=p@chr19:45350840..45350859,- | ||
}} | }} |
Latest revision as of 14:45, 27 July 2015
Short description: | p@chr19:45350840..45350859, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:45350840..45350859, - |
Coexpression cluster: | C597_CD14_mature_immature_Eosinophils_Mast_embryonic_chorionic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 7.43e-23 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.43e-23 | 42 |
defensive cell | 1.75e-20 | 48 |
phagocyte | 1.75e-20 | 48 |
granulocyte monocyte progenitor cell | 4.36e-17 | 67 |
macrophage dendritic cell progenitor | 6.25e-17 | 61 |
monopoietic cell | 1.03e-14 | 59 |
monocyte | 1.03e-14 | 59 |
monoblast | 1.03e-14 | 59 |
promonocyte | 1.03e-14 | 59 |
myeloid lineage restricted progenitor cell | 1.41e-14 | 66 |
myeloid leukocyte | 6.81e-14 | 72 |
myeloid cell | 1.07e-09 | 108 |
common myeloid progenitor | 1.07e-09 | 108 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.32e-14 | 76 |
bone element | 2.24e-13 | 82 |
skeletal element | 2.14e-11 | 90 |
immune system | 7.01e-10 | 93 |
skeletal system | 2.11e-09 | 100 |
hematopoietic system | 5.81e-09 | 98 |
blood island | 5.81e-09 | 98 |
hemolymphoid system | 2.07e-07 | 108 |
Ontology term | p-value | n |
---|---|---|
adenocarcinoma | 6.77e-09 | 25 |
thoracic cancer | 6.24e-08 | 4 |
breast cancer | 6.24e-08 | 4 |