FFCP PHASE1:Hg19::chr1:110625307..110625328,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000554808_5end | |association_with_transcript=0bp_to_ENST00000554808_5end | ||
|cluster_id=chr1:110625307..110625328,+ | |||
|coexpression_cluster_id=C465 | |coexpression_cluster_id=C465 | ||
|description=CAGE_peak_1_at_ENST00000554808_5end | |description=CAGE_peak_1_at_ENST00000554808_5end | ||
|id=chr1:110625307..110625328,+ | |id=chr1:110625307..110625328,+ | ||
|ontology_enrichment_celltype=CL:0000057!5.28e-13!75;CL:0002620!9.00e-12!23;CL:0000708!3.49e-08!3;CL:0000197!4.75e-07!6;CL:0000098!4.75e-07!6;CL:0002167!4.75e-07!6 | |ontology_enrichment_celltype=CL:0000057!5.28e-13!75;CL:0002620!9.00e-12!23;CL:0000708!3.49e-08!3;CL:0000197!4.75e-07!6;CL:0000098!4.75e-07!6;CL:0002167!4.75e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0000708;5.27e-20;3!CL:0000197;4.58e-18;6!CL:0000098;4.58e-18;6!CL:0002167;4.58e-18;6!CL:0002620;1.85e-16;23!CL:0002549;1.40e-13;2!CL:0002367;5.72e-13;2!CL:0002556;1.21e-09;6!CL:0000057;1.21e-08;73!CL:0002550;5.96e-08;1!CL:0002574;1.30e-07;1!CL:0000511;2.54e-07;1!CL:0002625;2.54e-07;1!CL:0000216;2.54e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000708,5.27e-20,3;CL:0000197,4.58e-18,6;CL:0000098,4.58e-18,6;CL:0002167,4.58e-18,6;CL:0000057,9.09e-18,76;CL:0002620,1.75e-16,23;CL:0002549,1.44e-13,2;CL:0002367,5.73e-13,2;CL:0002556,1.23e-09,6;CL:0002550,5.96e-08,1;CL:0002574,1.48e-07,1;CL:0000511,2.31e-07,1;CL:0002625,2.31e-07,1;CL:0000216,2.31e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0010115;7.51e-08;1 | |||
|ontology_enrichment_disease=DOID:17!1.48e-07!5;DOID:450!1.48e-07!5;DOID:66!1.48e-07!5;DOID:423!1.48e-07!5;DOID:0080000!1.48e-07!5;DOID:11722!1.48e-07!5 | |ontology_enrichment_disease=DOID:17!1.48e-07!5;DOID:450!1.48e-07!5;DOID:66!1.48e-07!5;DOID:423!1.48e-07!5;DOID:0080000!1.48e-07!5;DOID:11722!1.48e-07!5 | ||
|ontology_enrichment_disease_v019=DOID:2513;1.74e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:2513,1.91e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0000033!1.57e-17!123;UBERON:0000153!3.26e-16!129;UBERON:0007811!3.26e-16!129;UBERON:0000924!4.89e-15!173;UBERON:0006601!4.89e-15!173;UBERON:0002780!6.48e-15!41;UBERON:0001890!6.48e-15!41;UBERON:0006240!6.48e-15!41;UBERON:0003080!1.93e-14!42;UBERON:0002616!5.81e-14!59;UBERON:0004121!6.69e-14!169;UBERON:0000073!1.19e-13!94;UBERON:0001016!1.19e-13!94;UBERON:0005743!1.58e-13!86;UBERON:0003056!1.85e-13!61;UBERON:0001017!2.62e-13!82;UBERON:0000955!4.13e-13!69;UBERON:0006238!4.13e-13!69;UBERON:0001869!1.08e-12!32;UBERON:0002346!9.06e-12!90;UBERON:0001893!9.91e-12!34;UBERON:0003102!1.77e-11!95;UBERON:0002791!9.83e-11!33;UBERON:0003075!1.36e-10!86;UBERON:0007284!1.36e-10!86;UBERON:0001049!2.14e-10!57;UBERON:0005068!2.14e-10!57;UBERON:0006241!2.14e-10!57;UBERON:0007135!2.14e-10!57;UBERON:0002020!2.56e-10!34;UBERON:0003528!2.56e-10!34;UBERON:0002619!1.53e-09!22;UBERON:0002097!4.94e-09!40;UBERON:0007023!5.02e-09!115;UBERON:0002199!8.08e-09!45;UBERON:0002416!8.08e-09!45;UBERON:0000475!2.46e-08!365;UBERON:0003210!3.49e-08!3;UBERON:0000956!3.81e-08!25;UBERON:0000203!3.81e-08!25;UBERON:0001950!3.47e-07!20 | |ontology_enrichment_uberon=UBERON:0000033!1.57e-17!123;UBERON:0000153!3.26e-16!129;UBERON:0007811!3.26e-16!129;UBERON:0000924!4.89e-15!173;UBERON:0006601!4.89e-15!173;UBERON:0002780!6.48e-15!41;UBERON:0001890!6.48e-15!41;UBERON:0006240!6.48e-15!41;UBERON:0003080!1.93e-14!42;UBERON:0002616!5.81e-14!59;UBERON:0004121!6.69e-14!169;UBERON:0000073!1.19e-13!94;UBERON:0001016!1.19e-13!94;UBERON:0005743!1.58e-13!86;UBERON:0003056!1.85e-13!61;UBERON:0001017!2.62e-13!82;UBERON:0000955!4.13e-13!69;UBERON:0006238!4.13e-13!69;UBERON:0001869!1.08e-12!32;UBERON:0002346!9.06e-12!90;UBERON:0001893!9.91e-12!34;UBERON:0003102!1.77e-11!95;UBERON:0002791!9.83e-11!33;UBERON:0003075!1.36e-10!86;UBERON:0007284!1.36e-10!86;UBERON:0001049!2.14e-10!57;UBERON:0005068!2.14e-10!57;UBERON:0006241!2.14e-10!57;UBERON:0007135!2.14e-10!57;UBERON:0002020!2.56e-10!34;UBERON:0003528!2.56e-10!34;UBERON:0002619!1.53e-09!22;UBERON:0002097!4.94e-09!40;UBERON:0007023!5.02e-09!115;UBERON:0002199!8.08e-09!45;UBERON:0002416!8.08e-09!45;UBERON:0000475!2.46e-08!365;UBERON:0003210!3.49e-08!3;UBERON:0000956!3.81e-08!25;UBERON:0000203!3.81e-08!25;UBERON:0001950!3.47e-07!20 | ||
|ontology_enrichment_uberon_v019=UBERON:0003210;5.27e-20;3!UBERON:0006876;7.23e-14;11!UBERON:0005629;1.40e-13;2!UBERON:0005358;1.40e-13;2!UBERON:0001886;1.40e-13;2!UBERON:0004086;1.40e-13;2!UBERON:0005282;1.40e-13;2!UBERON:0005281;1.40e-13;2!UBERON:0005969;5.72e-13;2!UBERON:0003956;5.72e-13;2!UBERON:0005284;6.66e-12;5!UBERON:0001758;1.21e-09;6!UBERON:0003672;1.21e-09;6!UBERON:0002199;1.14e-08;46!UBERON:0002416;1.14e-08;46!UBERON:0003129;2.46e-08;7!UBERON:0002363;7.51e-08;1!UBERON:0002097;1.34e-07;41!UBERON:0001136;2.54e-07;1!UBERON:0001343;2.54e-07;1!UBERON:0004910;2.54e-07;1!UBERON:0004813;2.54e-07;1!UBERON:0003102;7.63e-07;50 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003210,5.27e-20,3;UBERON:0006876,7.13e-14,11;UBERON:0005629,1.44e-13,2;UBERON:0005358,1.44e-13,2;UBERON:0001886,1.44e-13,2;UBERON:0004086,1.44e-13,2;UBERON:0005282,1.44e-13,2;UBERON:0005281,1.44e-13,2;UBERON:0005969,5.73e-13,2;UBERON:0003956,5.73e-13,2;UBERON:0005284,6.54e-12,5;UBERON:0002097,5.25e-11,41;UBERON:0002199,1.18e-09,46;UBERON:0002416,1.18e-09,46;UBERON:0001758,1.23e-09,6;UBERON:0003672,1.23e-09,6;UBERON:0003102,1.59e-09,99;UBERON:0003129,2.50e-08,7;UBERON:0002363,7.76e-08,1;UBERON:0007645,7.76e-08,1;UBERON:0007647,7.76e-08,1;UBERON:0010115,7.76e-08,1;UBERON:0001136,2.31e-07,1;UBERON:0001343,2.31e-07,1;UBERON:0004910,2.31e-07,1;UBERON:0005154,2.31e-07,1;UBERON:0005295,2.31e-07,1;UBERON:0004813,2.31e-07,1;UBERON:0005297,2.31e-07,1;UBERON:0005294,2.31e-07,1;UBERON:0010141,2.31e-07,1;UBERON:0005891,2.31e-07,1;UBERON:0001444,8.74e-07,49 | |||
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| ||
|short_description=p1@ENST00000554808 | |short_description=p1@ENST00000554808 | ||
}} | }} |
Latest revision as of 19:29, 27 July 2015
Short description: | p1@ENST00000554808 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000554808_5end |
Coexpression cluster: | C465_Olfactory_basal_Fibroblast_Preadipocyte_Adipocyte_small_Prostate |
Association with transcript: | 0bp_to_ENST00000554808_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leptomeningeal cell | 5.27e-20 | 3 |
receptor cell | 4.58e-18 | 6 |
sensory epithelial cell | 4.58e-18 | 6 |
olfactory epithelial cell | 4.58e-18 | 6 |
fibroblast | 9.09e-18 | 76 |
skin fibroblast | 1.75e-16 | 23 |
fibroblast of choroid plexus | 1.44e-13 | 2 |
trabecular meshwork cell | 5.73e-13 | 2 |
fibroblast of periodontium | 1.23e-09 | 6 |
fibroblast of the conjuctiva | 5.96e-08 | 1 |
stromal cell of pancreas | 1.48e-07 | 1 |
androgen binding protein secreting cell | 2.31e-07 | 1 |
seminiferous tubule epithelial cell | 2.31e-07 | 1 |
Sertoli cell | 2.31e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
blood-cerebrospinal fluid barrier | 5.27e-20 | 3 |
vasculature of organ | 7.13e-14 | 11 |
vascular plexus | 1.44e-13 | 2 |
ventricle of nervous system | 1.44e-13 | 2 |
choroid plexus | 1.44e-13 | 2 |
brain ventricle | 1.44e-13 | 2 |
ventricular system of brain | 1.44e-13 | 2 |
ventricular system of central nervous system | 1.44e-13 | 2 |
reticulum trabeculare | 5.73e-13 | 2 |
aqueous drainage system | 5.73e-13 | 2 |
brain vasculature | 6.54e-12 | 5 |
skin of body | 5.25e-11 | 41 |
integument | 1.18e-09 | 46 |
integumental system | 1.18e-09 | 46 |
periodontium | 1.23e-09 | 6 |
dentition | 1.23e-09 | 6 |
surface structure | 1.59e-09 | 99 |
skull | 2.50e-08 | 7 |
dura mater | 7.76e-08 | 1 |
future meninx | 7.76e-08 | 1 |
ectomeninx | 7.76e-08 | 1 |
future dura mater | 7.76e-08 | 1 |
mesothelium | 2.31e-07 | 1 |
seminiferous tubule of testis | 2.31e-07 | 1 |
epithelium of male gonad | 2.31e-07 | 1 |
epithelial cord | 2.31e-07 | 1 |
sex cord | 2.31e-07 | 1 |
seminiferous tubule epithelium | 2.31e-07 | 1 |
testis sex cord | 2.31e-07 | 1 |
genital ridge | 2.31e-07 | 1 |
primitive sex cord of indifferent gonad | 2.31e-07 | 1 |
coelomic epithelium | 2.31e-07 | 1 |
subdivision of head | 8.74e-07 | 49 |
Ontology term | p-value | n |
---|---|---|
basal cell carcinoma | 1.91e-07 | 1 |