FFCP PHASE1:Hg19::chr1:201335999..201336006,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7139 | |EntrezGene=7139 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11949 | |HGNC=11949 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=87bp_to_ENST00000515042_5end | |association_with_transcript=87bp_to_ENST00000515042_5end | ||
|cluster_id=chr1:201335999..201336006,- | |||
|coexpression_cluster_id=C20 | |coexpression_cluster_id=C20 | ||
|description=CAGE_peak_7_at_TNNT2_5end | |description=CAGE_peak_7_at_TNNT2_5end | ||
|id=chr1:201335999..201336006,- | |id=chr1:201335999..201336006,- | ||
|ontology_enrichment_celltype=CL:0000188!4.57e-22!9 | |ontology_enrichment_celltype=CL:0000188!4.57e-22!9 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005062;1.82e-30;4!UBERON:0007284;1.82e-30;4!UBERON:0010227;5.42e-15;1!UBERON:0010226;6.22e-15;1!UBERON:0000358;7.13e-15;1!UBERON:0004140;1.61e-14;1!UBERON:0006603;3.24e-07;65!UBERON:0003104;4.67e-07;31 | |||
|ontology_enrichment_disease=DOID:114!2.62e-10!2 | |ontology_enrichment_disease=DOID:114!2.62e-10!2 | ||
|ontology_enrichment_disease_v019=DOID:114;5.41e-28;2!DOID:178;9.36e-15;1!DOID:326;9.36e-15;1!DOID:3978;9.36e-15;1!DOID:3394;9.36e-15;1!DOID:5844;9.36e-15;1!DOID:1287;1.61e-14;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,5.41e-28,2;DOID:178,9.36e-15,1;DOID:326,9.36e-15,1;DOID:3978,9.36e-15,1;DOID:3394,9.36e-15,1;DOID:5844,9.36e-15,1;DOID:1287,1.61e-14,4 | |||
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|ontology_enrichment_uberon_v019=UBERON:0007100;2.90e-42;25!UBERON:0004151;8.70e-41;3!UBERON:0003978;2.39e-40;3!UBERON:0000946;2.39e-40;3!UBERON:0002081;1.07e-27;2!UBERON:0002133;2.24e-27;2!UBERON:0000948;1.44e-21;22!UBERON:0002079;5.42e-15;1!UBERON:0002084;6.22e-15;1!UBERON:0002082;6.22e-15;1!UBERON:0002146;8.17e-15;1!UBERON:0005623;8.17e-15;1!UBERON:0002135;1.15e-14;1!UBERON:0002134;1.61e-14;1!UBERON:0005208;1.61e-14;1!UBERON:0004145;1.61e-14;1!UBERON:0005946;1.61e-14;1!UBERON:0005965;1.61e-14;1!UBERON:0002078;1.61e-14;1!UBERON:0007029;2.57e-14;1!UBERON:0010313;1.35e-12;10!UBERON:0003103;1.15e-08;61 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004151,8.70e-41,3;UBERON:0003978,2.24e-40,3;UBERON:0009751,2.24e-40,3;UBERON:0000946,2.24e-40,3;UBERON:0002523,2.24e-40,3;UBERON:0005983,2.24e-40,3;UBERON:0002165,2.24e-40,3;UBERON:0002062,2.24e-40,3;UBERON:0007280,2.24e-40,3;UBERON:0007100,4.65e-39,27;UBERON:0002081,1.07e-27,2;UBERON:0010227,1.07e-27,2;UBERON:0002133,2.09e-27,2;UBERON:0000948,9.54e-20,24;UBERON:0005498,9.54e-20,24;UBERON:0004140,9.54e-20,24;UBERON:0009881,9.54e-20,24;UBERON:0004141,9.54e-20,24;UBERON:0003084,9.54e-20,24;UBERON:0007005,9.54e-20,24;UBERON:0004139,9.54e-20,24;UBERON:0004291,9.54e-20,24;UBERON:0004797,9.86e-18,7;UBERON:0003103,5.38e-15,68;UBERON:0002079,5.42e-15,1;UBERON:0002084,6.22e-15,1;UBERON:0002082,6.22e-15,1;UBERON:0010226,6.22e-15,1;UBERON:0002146,8.17e-15,1;UBERON:0005623,8.17e-15,1;UBERON:0002135,1.07e-14,1;UBERON:0002134,1.61e-14,1;UBERON:0005208,1.61e-14,1;UBERON:0005946,1.61e-14,1;UBERON:0005965,1.61e-14,1;UBERON:0002078,1.61e-14,1;UBERON:0007029,2.75e-14,1;UBERON:0010313,1.33e-12,10;UBERON:0002342,1.33e-12,10;UBERON:0005062,1.33e-12,10;UBERON:0001009,1.02e-08,112;UBERON:0007023,9.33e-07,114 | |||
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| ||
|short_description=p7@TNNT2 | |short_description=p7@TNNT2 | ||
}} | }} |
Latest revision as of 17:32, 19 September 2015
Short description: | p7@TNNT2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_TNNT2_5end |
Coexpression cluster: | C20_heart_left_skeletal_diaphragm_tongue_umbilical_throat |
Association with transcript: | 87bp_to_ENST00000515042_5end |
EntrezGene: | TNNT2 |
HGNC: | 11949 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
heart disease | 5.41e-28 | 2 |
vascular disease | 9.36e-15 | 1 |
ischemia | 9.36e-15 | 1 |
extrinsic cardiomyopathy | 9.36e-15 | 1 |
myocardial ischemia | 9.36e-15 | 1 |
myocardial infarction | 9.36e-15 | 1 |
cardiovascular system disease | 1.61e-14 | 4 |